RNA–Protein interactions for RNA: ENST00000598471.1

UPF1-206, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 3

Gene UPF1, Length 582 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-206ENST00000598471 SLC9B2Q86UD5 537 aa15□□□□□ -0.01
UPF1-206ENST00000598471 CUZD1Q86UP6 607 aa15□□□□□ -0.01
UPF1-206ENST00000598471 WDR75Q8IWA0 830 aaKnown RBP15□□□□□ -0.01
UPF1-206ENST00000598471 HOMEZQ8IX15 550 aa15□□□□□ -0.01
UPF1-206ENST00000598471 RBM12BQ8IXT5 1001 aaKnown RBP15□□□□□ -0.01
UPF1-206ENST00000598471 SNX31Q8N9S9 440 aa15□□□□□ -0.01
UPF1-206ENST00000598471 OR56A3Q8NH54 315 aa15□□□□□ -0.01
UPF1-206ENST00000598471 TRPC4APQ8TEL6 797 aa15□□□□□ -0.01
UPF1-206ENST00000598471 ZDHHC1Q8WTX9 485 aa15□□□□□ -0.01
UPF1-206ENST00000598471 ZNF480Q8WV37 535 aa15□□□□□ -0.01
UPF1-206ENST00000598471 ATP6V1E2Q96A05 226 aa15□□□□□ -0.01
UPF1-206ENST00000598471 ESAMQ96AP7 390 aa15□□□□□ -0.01
UPF1-206ENST00000598471 MED8Q96G25 268 aa15□□□□□ -0.01
UPF1-206ENST00000598471 CCT8L2Q96SF2 557 aa15□□□□□ -0.01
UPF1-206ENST00000598471 SORT1Q99523 831 aa15□□□□□ -0.01
UPF1-206ENST00000598471 TRIM55Q9BYV6 548 aa15□□□□□ -0.01
UPF1-206ENST00000598471 ATG10Q9H0Y0 220 aa15□□□□□ -0.01
UPF1-206ENST00000598471 IRF2BPLQ9H1B7 796 aa15□□□□□ -0.01
UPF1-206ENST00000598471 KIR3DX1Q9H7L2 352 aa15□□□□□ -0.01
UPF1-206ENST00000598471 SEMA4BQ9NPR2 832 aaPredicted RBP15□□□□□ -0.01
UPF1-206ENST00000598471 CCDC177Q9NQR7 707 aaPredicted RBP15□□□□□ -0.01
UPF1-206ENST00000598471 ACSS2Q9NR19 701 aa15□□□□□ -0.01
UPF1-206ENST00000598471 SCHIP1Q9P0W5 487 aaPredicted RBP15□□□□□ -0.01
UPF1-206ENST00000598471 CIDEBQ9UHD4 219 aa15□□□□□ -0.01
UPF1-206ENST00000598471 CSNK1G3Q9Y6M4 447 aa15□□□□□ -0.01
UPF1-206ENST00000598471 TNRC6BQ9UPQ9 1833 aaKnown RBP14.99□□□□□ -0.01
UPF1-206ENST00000598471 SPAG17Q6Q759 2223 aa14.99□□□□□ -0.01
UPF1-206ENST00000598471 KRT87PA6NCN2 255 aa14.99□□□□□ -0.01
UPF1-206ENST00000598471 B4DGG1 531 aa14.99□□□□□ -0.01
UPF1-206ENST00000598471 SLCO1B7G3V0H7 640 aa14.99□□□□□ -0.01
UPF1-206ENST00000598471 NDUFAB1O14561 156 aa14.99□□□□□ -0.01
UPF1-206ENST00000598471 CRCPO75575 148 aa14.99□□□□□ -0.01
UPF1-206ENST00000598471 EML2O95834 649 aa14.99□□□□□ -0.01
UPF1-206ENST00000598471 OTCP00480 354 aa14.99□□□□□ -0.01
UPF1-206ENST00000598471 CHRNGP07510 517 aa14.99□□□□□ -0.01
UPF1-206ENST00000598471 ERGP11308 486 aa14.99□□□□□ -0.01
UPF1-206ENST00000598471 XRCC1P18887 633 aaPredicted RBP14.99□□□□□ -0.01
UPF1-206ENST00000598471 SLC19A1P41440 591 aa14.99□□□□□ -0.01
UPF1-206ENST00000598471 GDF5P43026 501 aa14.99□□□□□ -0.01
UPF1-206ENST00000598471 RXRGP48443 463 aa14.99□□□□□ -0.01
UPF1-206ENST00000598471 RAB28P51157 221 aa14.99□□□□□ -0.01
UPF1-206ENST00000598471 CCNG1P51959 295 aa14.99□□□□□ -0.01
UPF1-206ENST00000598471 TBPL1P62380 186 aa14.99□□□□□ -0.01
UPF1-206ENST00000598471 GRB7Q14451 532 aa14.99□□□□□ -0.01
UPF1-206ENST00000598471 CYP2A13Q16696 494 aa14.99□□□□□ -0.01
UPF1-206ENST00000598471 GPRIN3Q6ZVF9 776 aa14.99□□□□□ -0.01
UPF1-206ENST00000598471 THOC6Q86W42 341 aaKnown RBP14.99□□□□□ -0.01
UPF1-206ENST00000598471 LSMEM2Q8N112 164 aa14.99□□□□□ -0.01
UPF1-206ENST00000598471 OR52E1Q8NGJ3 308 aa14.99□□□□□ -0.01
UPF1-206ENST00000598471 PIWIL2Q8TC59 973 aaKnown RBP14.99□□□□□ -0.01
UPF1-206ENST00000598471 MAPK15Q8TD08 544 aa14.99□□□□□ -0.01
UPF1-206ENST00000598471 BCAS4Q8TDM0 211 aa14.99□□□□□ -0.01
UPF1-206ENST00000598471 SMPDL3AQ92484 453 aa14.99□□□□□ -0.01
UPF1-206ENST00000598471 FAR2Q96K12 515 aa14.99□□□□□ -0.01
UPF1-206ENST00000598471 MAGEB10Q96LZ2 347 aaPredicted RBP14.99□□□□□ -0.01
UPF1-206ENST00000598471 NSUN5Q96P11 429 aaKnown RBP14.99□□□□□ -0.01
UPF1-206ENST00000598471 ZNF382Q96SR6 550 aa14.99□□□□□ -0.01
UPF1-206ENST00000598471 SIKE1Q9BRV8 207 aa14.99□□□□□ -0.01
UPF1-206ENST00000598471 C20orf27Q9GZN8 174 aa14.99□□□□□ -0.01
UPF1-206ENST00000598471 ZNF395Q9H8N7 513 aaPredicted RBP14.99□□□□□ -0.01
UPF1-206ENST00000598471 IPPKQ9H8X2 491 aa14.99□□□□□ -0.01
UPF1-206ENST00000598471 MID1IP1Q9NPA3 183 aa14.99□□□□□ -0.01
UPF1-206ENST00000598471 ZNF624Q9P2J8 865 aaPredicted RBP14.99□□□□□ -0.01
UPF1-206ENST00000598471 HAO1Q9UJM8 370 aa14.99□□□□□ -0.01
UPF1-206ENST00000598471 PLAGL1Q9UM63 463 aa14.99□□□□□ -0.01
UPF1-206ENST00000598471 SLC6A14Q9UN76 642 aa14.99□□□□□ -0.01
UPF1-206ENST00000598471 DYRK1BQ9Y463 629 aa14.99□□□□□ -0.01
UPF1-206ENST00000598471 ASB1Q9Y576 335 aa14.99□□□□□ -0.01
UPF1-206ENST00000598471 PCDHGA5Q9Y5G8 931 aa14.99□□□□□ -0.01
UPF1-206ENST00000598471 ZFC3H1O60293 1989 aaKnown RBP14.98□□□□□ -0.01
UPF1-206ENST00000598471 EPN2O95208 641 aa14.98□□□□□ -0.01
UPF1-206ENST00000598471 SYPP08247 313 aa14.98□□□□□ -0.01
UPF1-206ENST00000598471 TSPAN8P19075 237 aa14.98□□□□□ -0.01
UPF1-206ENST00000598471 MPSTP25325 297 aa14.98□□□□□ -0.01
UPF1-206ENST00000598471 PKLRP30613 574 aa14.98□□□□□ -0.01
UPF1-206ENST00000598471 ARRB2P32121 409 aa14.98□□□□□ -0.01
UPF1-206ENST00000598471 SHMT2P34897 504 aa14.98□□□□□ -0.01
UPF1-206ENST00000598471 CCR10P46092 362 aa14.98□□□□□ -0.01
UPF1-206ENST00000598471 RPL14P50914 215 aaKnown RBP14.98□□□□□ -0.01
UPF1-206ENST00000598471 GRIK2Q13002 908 aa14.98□□□□□ -0.01
UPF1-206ENST00000598471 CDC16Q13042 620 aa14.98□□□□□ -0.01
UPF1-206ENST00000598471 BIRC2Q13490 618 aa14.98□□□□□ -0.01
UPF1-206ENST00000598471 TSTA3Q13630 321 aaPredicted RBP14.98□□□□□ -0.01
UPF1-206ENST00000598471 ZNF423Q2M1K9 1284 aa14.98□□□□□ -0.01
UPF1-206ENST00000598471 SH2D4BQ5SQS7 431 aa14.98□□□□□ -0.01
UPF1-206ENST00000598471 PRAMEF14Q5SWL7 426 aa14.98□□□□□ -0.01
UPF1-206ENST00000598471 THEMIS2Q5TEJ8 643 aa14.98□□□□□ -0.01
UPF1-206ENST00000598471 RPS27LQ71UM5 84 aaKnown RBP14.98□□□□□ -0.01
UPF1-206ENST00000598471 SFRP1Q8N474 314 aa14.98□□□□□ -0.01
UPF1-206ENST00000598471 ZNF781Q8N8C0 355 aa14.98□□□□□ -0.01
UPF1-206ENST00000598471 OR2L8Q8NGY9 312 aa14.98□□□□□ -0.01
UPF1-206ENST00000598471 HMGCLL1Q8TB92 370 aa14.98□□□□□ -0.01
UPF1-206ENST00000598471 LCN9Q8WX39 176 aa14.98□□□□□ -0.01
UPF1-206ENST00000598471 PYCR2Q96C36 320 aa14.98□□□□□ -0.01
UPF1-206ENST00000598471 MOCOSQ96EN8 888 aa14.98□□□□□ -0.01
UPF1-206ENST00000598471 MIPEPQ99797 713 aa14.98□□□□□ -0.01
UPF1-206ENST00000598471 SHCBP1LQ9BZQ2 653 aa14.98□□□□□ -0.01
UPF1-206ENST00000598471 PCBD2Q9H0N5 130 aa14.98□□□□□ -0.01
UPF1-206ENST00000598471 RABEP2Q9H5N1 569 aa14.98□□□□□ -0.01
UPF1-206ENST00000598471 NOL11Q9H8H0 719 aaKnown RBP14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms