RNA–Protein interactions for RNA: ENST00000598359.5

SCAF1-203, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 662 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-203ENST00000598359 ASZ1Q8WWH4 475 aa13.28□□□□□ -0.28
SCAF1-203ENST00000598359 CPT1BQ92523 772 aa13.28□□□□□ -0.28
SCAF1-203ENST00000598359 PBKQ96KB5 322 aa13.28□□□□□ -0.28
SCAF1-203ENST00000598359 CAPZA3Q96KX2 299 aa13.28□□□□□ -0.28
SCAF1-203ENST00000598359 KIFC1Q9BW19 673 aa13.28□□□□□ -0.28
SCAF1-203ENST00000598359 TSSK1BQ9BXA7 367 aa13.28□□□□□ -0.28
SCAF1-203ENST00000598359 TRIM55Q9BYV6 548 aa13.28□□□□□ -0.28
SCAF1-203ENST00000598359 SPRTNQ9H040 489 aaPredicted RBP13.28□□□□□ -0.28
SCAF1-203ENST00000598359 HOMER3Q9NSC5 361 aa13.28□□□□□ -0.28
SCAF1-203ENST00000598359 ZNF446Q9NWS9 450 aa13.28□□□□□ -0.28
SCAF1-203ENST00000598359 TUBD1Q9UJT1 453 aa13.28□□□□□ -0.28
SCAF1-203ENST00000598359 FARSAQ9Y285 508 aaKnown RBP13.28□□□□□ -0.28
SCAF1-203ENST00000598359 MAN2B2Q9Y2E5 1009 aa13.28□□□□□ -0.28
SCAF1-203ENST00000598359 NFS1Q9Y697 457 aa13.28□□□□□ -0.28
SCAF1-203ENST00000598359 SPTBP11277 2137 aa13.27□□□□□ -0.28
SCAF1-203ENST00000598359 A0A0J9YY10 115 aa13.27□□□□□ -0.29
SCAF1-203ENST00000598359 F8W8V4 182 aa13.27□□□□□ -0.29
SCAF1-203ENST00000598359 MAP3K7O43318 606 aa13.27□□□□□ -0.29
SCAF1-203ENST00000598359 KLK3P07288 261 aaPredicted RBP13.27□□□□□ -0.29
SCAF1-203ENST00000598359 CAPN1P07384 714 aa13.27□□□□□ -0.29
SCAF1-203ENST00000598359 MCM3P25205 808 aa13.27□□□□□ -0.29
SCAF1-203ENST00000598359 PAFAH1B1P43034 410 aa13.27□□□□□ -0.29
SCAF1-203ENST00000598359 BDKRB1P46663 353 aa13.27□□□□□ -0.29
SCAF1-203ENST00000598359 CDK16Q00536 496 aa13.27□□□□□ -0.29
SCAF1-203ENST00000598359 PLOD1Q02809 727 aaPredicted RBP13.27□□□□□ -0.29
SCAF1-203ENST00000598359 TMED2Q15363 201 aa13.27□□□□□ -0.29
SCAF1-203ENST00000598359 KYNUQ16719 465 aa13.27□□□□□ -0.29
SCAF1-203ENST00000598359 CCSMST1Q4G0I0 132 aa13.27□□□□□ -0.29
SCAF1-203ENST00000598359 DNAJC21Q5F1R6 531 aaKnown RBP13.27□□□□□ -0.29
SCAF1-203ENST00000598359 C1orf189Q5VU69 101 aa13.27□□□□□ -0.29
SCAF1-203ENST00000598359 CASC4Q6P4E1 433 aa13.27□□□□□ -0.29
SCAF1-203ENST00000598359 ZNF517Q6ZMY9 492 aaPredicted RBP13.27□□□□□ -0.29
SCAF1-203ENST00000598359 ATG14Q6ZNE5 492 aa13.27□□□□□ -0.29
SCAF1-203ENST00000598359 SYTL1Q8IYJ3 562 aa13.27□□□□□ -0.29
SCAF1-203ENST00000598359 SPATA4Q8NEY3 305 aa13.27□□□□□ -0.29
SCAF1-203ENST00000598359 SKA2Q8WVK7 121 aaPredicted RBP13.27□□□□□ -0.29
SCAF1-203ENST00000598359 MENTQ9BUN1 341 aa13.27□□□□□ -0.29
SCAF1-203ENST00000598359 GPR87Q9BY21 358 aa13.27□□□□□ -0.29
SCAF1-203ENST00000598359 SLC7A5P2Q9GIP4 190 aa13.27□□□□□ -0.29
SCAF1-203ENST00000598359 IGSF5Q9NSI5 407 aa13.27□□□□□ -0.29
SCAF1-203ENST00000598359 OR6C2Q9NZP2 312 aa13.27□□□□□ -0.29
SCAF1-203ENST00000598359 GALPQ9UBC7 116 aa13.27□□□□□ -0.29
SCAF1-203ENST00000598359 GNPTGQ9UJJ9 305 aa13.27□□□□□ -0.29
SCAF1-203ENST00000598359 SERTAD3Q9UJW9 196 aa13.27□□□□□ -0.29
SCAF1-203ENST00000598359 TLK1Q9UKI8 766 aa13.27□□□□□ -0.29
SCAF1-203ENST00000598359 SOX13Q9UN79 622 aa13.27□□□□□ -0.29
SCAF1-203ENST00000598359 TP53TG5Q9Y2B4 290 aa13.27□□□□□ -0.29
SCAF1-203ENST00000598359 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.26□□□□□ -0.29
SCAF1-203ENST00000598359 E7EQ34 232 aa13.26□□□□□ -0.29
SCAF1-203ENST00000598359 NIPSNAP2O75323 286 aa13.26□□□□□ -0.29
SCAF1-203ENST00000598359 SLCO2B1O94956 709 aa13.26□□□□□ -0.29
SCAF1-203ENST00000598359 MSL3P1P0C860 447 aa13.26□□□□□ -0.29
SCAF1-203ENST00000598359 MAGP20916 626 aa13.26□□□□□ -0.29
SCAF1-203ENST00000598359 COILP38432 576 aaPredicted RBP13.26□□□□□ -0.29
SCAF1-203ENST00000598359 GABRA4P48169 554 aa13.26□□□□□ -0.29
SCAF1-203ENST00000598359 RAB28P51157 221 aa13.26□□□□□ -0.29
SCAF1-203ENST00000598359 UGT8Q16880 541 aa13.26□□□□□ -0.29
SCAF1-203ENST00000598359 CNSTQ6PJW8 725 aa13.26□□□□□ -0.29
SCAF1-203ENST00000598359 FAM198BQ6UWH4 519 aa13.26□□□□□ -0.29
SCAF1-203ENST00000598359 DCUN1D3Q8IWE4 304 aa13.26□□□□□ -0.29
SCAF1-203ENST00000598359 ACTRT1Q8TDG2 376 aa13.26□□□□□ -0.29
SCAF1-203ENST00000598359 LPGAT1Q92604 370 aa13.26□□□□□ -0.29
SCAF1-203ENST00000598359 N4BP2L2Q92802 583 aaPredicted RBP13.26□□□□□ -0.29
SCAF1-203ENST00000598359 TCTN2Q96GX1 697 aa13.26□□□□□ -0.29
SCAF1-203ENST00000598359 LRFN5Q96NI6 719 aa13.26□□□□□ -0.29
SCAF1-203ENST00000598359 BIRC8Q96P09 236 aa13.26□□□□□ -0.29
SCAF1-203ENST00000598359 MRM3Q9HC36 420 aaKnown RBP13.26□□□□□ -0.29
SCAF1-203ENST00000598359 SYTL2Q9HCH5 934 aa13.26□□□□□ -0.29
SCAF1-203ENST00000598359 CRYL1Q9Y2S2 319 aa13.26□□□□□ -0.29
SCAF1-203ENST00000598359 SPTAN1Q13813 2472 aaKnown RBP13.25□□□□□ -0.29
SCAF1-203ENST00000598359 NBPF19A0A087WUL8 3843 aa13.25□□□□□ -0.29
SCAF1-203ENST00000598359 SPENQ96T58 3664 aaKnown RBP13.25□□□□□ -0.29
SCAF1-203ENST00000598359 ARGFXA6NJG6 315 aa13.25□□□□□ -0.29
SCAF1-203ENST00000598359 H3BMH7 237 aa13.25□□□□□ -0.29
SCAF1-203ENST00000598359 AP3B1O00203 1094 aa13.25□□□□□ -0.29
SCAF1-203ENST00000598359 PGRMC1O00264 195 aaKnown RBP13.25□□□□□ -0.29
SCAF1-203ENST00000598359 ERLIN1O75477 346 aa13.25□□□□□ -0.29
SCAF1-203ENST00000598359 RFPL1O75677 317 aa13.25□□□□□ -0.29
SCAF1-203ENST00000598359 OR2B3O76000 313 aa13.25□□□□□ -0.29
SCAF1-203ENST00000598359 PDGFAP04085 211 aa13.25□□□□□ -0.29
SCAF1-203ENST00000598359 CBSLP0DN79 551 aa13.25□□□□□ -0.29
SCAF1-203ENST00000598359 CD9P21926 228 aa13.25□□□□□ -0.29
SCAF1-203ENST00000598359 RPS3P23396 243 aaKnown RBP eCLIP13.25□□□□□ -0.29
SCAF1-203ENST00000598359 CBSP35520 551 aa13.25□□□□□ -0.29
SCAF1-203ENST00000598359 MAGEA6P43360 314 aa13.25□□□□□ -0.29
SCAF1-203ENST00000598359 PMS2P54278 862 aa13.25□□□□□ -0.29
SCAF1-203ENST00000598359 FOXL2P58012 376 aa13.25□□□□□ -0.29
SCAF1-203ENST00000598359 TLE1Q04724 770 aa13.25□□□□□ -0.29
SCAF1-203ENST00000598359 C2orf54Q08AI8 447 aa13.25□□□□□ -0.29
SCAF1-203ENST00000598359 SLC9A5Q14940 896 aa13.25□□□□□ -0.29
SCAF1-203ENST00000598359 KIR2DS3Q14952 304 aa13.25□□□□□ -0.29
SCAF1-203ENST00000598359 SLC5A12Q1EHB4 618 aa13.25□□□□□ -0.29
SCAF1-203ENST00000598359 GLE1Q53GS7 698 aaKnown RBP13.25□□□□□ -0.29
SCAF1-203ENST00000598359 LACTB2Q53H82 288 aaPredicted RBP13.25□□□□□ -0.29
SCAF1-203ENST00000598359 IZUMO3Q5VZ72 239 aa13.25□□□□□ -0.29
SCAF1-203ENST00000598359 KIAA0930Q6ICG6 404 aaPredicted RBP13.25□□□□□ -0.29
SCAF1-203ENST00000598359 MRNIPQ6NTE8 343 aa13.25□□□□□ -0.29
SCAF1-203ENST00000598359 CCDC137Q6PK04 289 aaKnown RBP13.25□□□□□ -0.29
SCAF1-203ENST00000598359 UNC5DQ6UXZ4 953 aa13.25□□□□□ -0.29
SCAF1-203ENST00000598359 OTOAQ7RTW8 1153 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms