RNA–Protein interactions for RNA: ENST00000597423.1

TRIM28-209, Transcript of tripartite motif containing 28, humanhuman

TSL 3

Gene TRIM28, Length 733 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-209ENST00000597423 CCNG1P51959 295 aa14.8□□□□□ -0.04
TRIM28-209ENST00000597423 BIRC2Q13490 618 aa14.8□□□□□ -0.04
TRIM28-209ENST00000597423 TERF2Q15554 542 aa14.8□□□□□ -0.04
TRIM28-209ENST00000597423 CYP2A13Q16696 494 aa14.8□□□□□ -0.04
TRIM28-209ENST00000597423 CCSMST1Q4G0I0 132 aa14.8□□□□□ -0.04
TRIM28-209ENST00000597423 LAYNQ6UX15 382 aa14.8□□□□□ -0.04
TRIM28-209ENST00000597423 MBOAT1Q6ZNC8 495 aa14.8□□□□□ -0.04
TRIM28-209ENST00000597423 GPRIN3Q6ZVF9 776 aa14.8□□□□□ -0.04
TRIM28-209ENST00000597423 SPATA21Q7Z572 469 aa14.8□□□□□ -0.04
TRIM28-209ENST00000597423 GOLGA7Q7Z5G4 137 aa14.8□□□□□ -0.04
TRIM28-209ENST00000597423 MILR1Q7Z6M3 343 aa14.8□□□□□ -0.04
TRIM28-209ENST00000597423 THOC6Q86W42 341 aaKnown RBP14.8□□□□□ -0.04
TRIM28-209ENST00000597423 LSMEM2Q8N112 164 aa14.8□□□□□ -0.04
TRIM28-209ENST00000597423 ANKS4BQ8N8V4 417 aa14.8□□□□□ -0.04
TRIM28-209ENST00000597423 ZDHHC1Q8WTX9 485 aa14.8□□□□□ -0.04
TRIM28-209ENST00000597423 ZNF480Q8WV37 535 aa14.8□□□□□ -0.04
TRIM28-209ENST00000597423 SMPDL3AQ92484 453 aa14.8□□□□□ -0.04
TRIM28-209ENST00000597423 ESAMQ96AP7 390 aa14.8□□□□□ -0.04
TRIM28-209ENST00000597423 ZNF382Q96SR6 550 aa14.8□□□□□ -0.04
TRIM28-209ENST00000597423 SORT1Q99523 831 aa14.8□□□□□ -0.04
TRIM28-209ENST00000597423 ELF4Q99607 663 aaPredicted RBP14.8□□□□□ -0.04
TRIM28-209ENST00000597423 PRRX2Q99811 253 aa14.8□□□□□ -0.04
TRIM28-209ENST00000597423 PLCD4Q9BRC7 762 aa14.8□□□□□ -0.04
TRIM28-209ENST00000597423 TMEM79Q9BSE2 394 aa14.8□□□□□ -0.04
TRIM28-209ENST00000597423 HAUS8Q9BT25 410 aa14.8□□□□□ -0.04
TRIM28-209ENST00000597423 NOL11Q9H8H0 719 aaKnown RBP14.8□□□□□ -0.04
TRIM28-209ENST00000597423 ZNF395Q9H8N7 513 aaPredicted RBP14.8□□□□□ -0.04
TRIM28-209ENST00000597423 POT1Q9NUX5 634 aa14.8□□□□□ -0.04
TRIM28-209ENST00000597423 GPRC5BQ9NZH0 403 aa14.8□□□□□ -0.04
TRIM28-209ENST00000597423 KLHL14Q9P2G3 628 aa14.8□□□□□ -0.04
TRIM28-209ENST00000597423 SLC6A14Q9UN76 642 aa14.8□□□□□ -0.04
TRIM28-209ENST00000597423 APOBEC2Q9Y235 224 aaKnown RBP14.8□□□□□ -0.04
TRIM28-209ENST00000597423 SLC22A14Q9Y267 594 aa14.8□□□□□ -0.04
TRIM28-209ENST00000597423 DYRK1BQ9Y463 629 aa14.8□□□□□ -0.04
TRIM28-209ENST00000597423 TRAF6Q9Y4K3 522 aa14.8□□□□□ -0.04
TRIM28-209ENST00000597423 SNX11Q9Y5W9 270 aa14.8□□□□□ -0.04
TRIM28-209ENST00000597423 ST14Q9Y5Y6 855 aa14.8□□□□□ -0.04
TRIM28-209ENST00000597423 FAM86C2PA6NEL3 165 aa14.79□□□□□ -0.04
TRIM28-209ENST00000597423 LRRC14BA6NHZ5 514 aa14.79□□□□□ -0.04
TRIM28-209ENST00000597423 TRPC5OSA6NMA1 111 aa14.79□□□□□ -0.04
TRIM28-209ENST00000597423 YY2O15391 372 aa14.79□□□□□ -0.04
TRIM28-209ENST00000597423 CFIP05156 583 aa14.79□□□□□ -0.04
TRIM28-209ENST00000597423 ENO1P06733 434 aaKnown RBP14.79□□□□□ -0.04
TRIM28-209ENST00000597423 CHRNGP07510 517 aa14.79□□□□□ -0.04
TRIM28-209ENST00000597423 EBLN1P0CF75 366 aa14.79□□□□□ -0.04
TRIM28-209ENST00000597423 GNAZP19086 355 aa14.79□□□□□ -0.04
TRIM28-209ENST00000597423 IMPA1P29218 277 aa14.79□□□□□ -0.04
TRIM28-209ENST00000597423 GDF5P43026 501 aa14.79□□□□□ -0.04
TRIM28-209ENST00000597423 CDC16Q13042 620 aa14.79□□□□□ -0.04
TRIM28-209ENST00000597423 TCEA2Q15560 299 aa14.79□□□□□ -0.04
TRIM28-209ENST00000597423 C18orf21Q32NC0 220 aaPredicted RBP14.79□□□□□ -0.04
TRIM28-209ENST00000597423 SH2D4BQ5SQS7 431 aa14.79□□□□□ -0.04
TRIM28-209ENST00000597423 THEMIS2Q5TEJ8 643 aa14.79□□□□□ -0.04
TRIM28-209ENST00000597423 CES4AQ5XG92 561 aa14.79□□□□□ -0.04
TRIM28-209ENST00000597423 PIGWQ7Z7B1 504 aa14.79□□□□□ -0.04
TRIM28-209ENST00000597423 ZNF548Q8NEK5 533 aaPredicted RBP14.79□□□□□ -0.04
TRIM28-209ENST00000597423 MAPK15Q8TD08 544 aa14.79□□□□□ -0.04
TRIM28-209ENST00000597423 LCN9Q8WX39 176 aa14.79□□□□□ -0.04
TRIM28-209ENST00000597423 CCT6BQ92526 530 aa14.79□□□□□ -0.04
TRIM28-209ENST00000597423 ATXN2Q99700 1313 aaKnown RBP14.79□□□□□ -0.04
TRIM28-209ENST00000597423 CCT7Q99832 543 aa14.79□□□□□ -0.04
TRIM28-209ENST00000597423 NTMT1Q9BV86 223 aa14.79□□□□□ -0.04
TRIM28-209ENST00000597423 C20orf27Q9GZN8 174 aa14.79□□□□□ -0.04
TRIM28-209ENST00000597423 NPHS2Q9NP85 383 aa14.79□□□□□ -0.04
TRIM28-209ENST00000597423 CCDC177Q9NQR7 707 aaPredicted RBP14.79□□□□□ -0.04
TRIM28-209ENST00000597423 TMEM74BQ9NUR3 256 aa14.79□□□□□ -0.04
TRIM28-209ENST00000597423 PNPOQ9NVS9 261 aa14.79□□□□□ -0.04
TRIM28-209ENST00000597423 SCHIP1Q9P0W5 487 aaPredicted RBP14.79□□□□□ -0.04
TRIM28-209ENST00000597423 ZNF624Q9P2J8 865 aaPredicted RBP14.79□□□□□ -0.04
TRIM28-209ENST00000597423 CPNE7Q9UBL6 633 aa14.79□□□□□ -0.04
TRIM28-209ENST00000597423 ZDHHC2Q9UIJ5 367 aa14.79□□□□□ -0.04
TRIM28-209ENST00000597423 PCDHGA5Q9Y5G8 931 aa14.79□□□□□ -0.04
TRIM28-209ENST00000597423 TRBV23OR9-2A0A075B6M9 112 aa14.78□□□□□ -0.04
TRIM28-209ENST00000597423 E7ENX8 843 aa14.78□□□□□ -0.04
TRIM28-209ENST00000597423 AZIN1O14977 448 aa14.78□□□□□ -0.04
TRIM28-209ENST00000597423 HDAC3O15379 428 aa14.78□□□□□ -0.04
TRIM28-209ENST00000597423 SNX3O60493 162 aa14.78□□□□□ -0.04
TRIM28-209ENST00000597423 UGDHO60701 494 aa14.78□□□□□ -0.04
TRIM28-209ENST00000597423 PIAS2O75928 621 aa14.78□□□□□ -0.04
TRIM28-209ENST00000597423 CLDN9O95484 217 aa14.78□□□□□ -0.04
TRIM28-209ENST00000597423 KITP10721 976 aa14.78□□□□□ -0.04
TRIM28-209ENST00000597423 UROSP10746 265 aa14.78□□□□□ -0.04
TRIM28-209ENST00000597423 SLC19A1P41440 591 aa14.78□□□□□ -0.04
TRIM28-209ENST00000597423 ARFIP2P53365 341 aa14.78□□□□□ -0.04
TRIM28-209ENST00000597423 SH3BP2P78314 561 aa14.78□□□□□ -0.04
TRIM28-209ENST00000597423 TAP2Q03519 686 aa14.78□□□□□ -0.04
TRIM28-209ENST00000597423 TSTA3Q13630 321 aaPredicted RBP14.78□□□□□ -0.04
TRIM28-209ENST00000597423 FBXO48Q5FWF7 155 aa14.78□□□□□ -0.04
TRIM28-209ENST00000597423 SFRP1Q8N474 314 aa14.78□□□□□ -0.04
TRIM28-209ENST00000597423 ZNF781Q8N8C0 355 aa14.78□□□□□ -0.04
TRIM28-209ENST00000597423 OR2L8Q8NGY9 312 aa14.78□□□□□ -0.04
TRIM28-209ENST00000597423 HMGCLL1Q8TB92 370 aa14.78□□□□□ -0.04
TRIM28-209ENST00000597423 ZNF473Q8WTR7 871 aaKnown RBP14.78□□□□□ -0.04
TRIM28-209ENST00000597423 SLC22A18Q96BI1 424 aa14.78□□□□□ -0.04
TRIM28-209ENST00000597423 PYCR2Q96C36 320 aa14.78□□□□□ -0.04
TRIM28-209ENST00000597423 MOCOSQ96EN8 888 aa14.78□□□□□ -0.04
TRIM28-209ENST00000597423 NSUN5Q96P11 429 aaKnown RBP14.78□□□□□ -0.04
TRIM28-209ENST00000597423 SGPP1Q9BX95 441 aa14.78□□□□□ -0.04
TRIM28-209ENST00000597423 LDHAL6BQ9BYZ2 381 aaPredicted RBP14.78□□□□□ -0.04
TRIM28-209ENST00000597423 SRMSQ9H3Y6 488 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms