RNA–Protein interactions for RNA: ENST00000597396.5

SHKBP1-214, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 1,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-214ENST00000597396 ANKS6Q68DC2 871 aa19.02■□□□□ 0.64
SHKBP1-214ENST00000597396 FBXO38Q6PIJ6 1188 aa19.02■□□□□ 0.64
SHKBP1-214ENST00000597396 SPESP1Q6UW49 350 aa19.02■□□□□ 0.64
SHKBP1-214ENST00000597396 TRMT10CQ7L0Y3 403 aaKnown RBP19.02■□□□□ 0.64
SHKBP1-214ENST00000597396 KMT5CQ86Y97 462 aa19.02■□□□□ 0.64
SHKBP1-214ENST00000597396 CARFQ8N187 725 aa19.02■□□□□ 0.64
SHKBP1-214ENST00000597396 NKAPQ8N5F7 415 aaKnown RBP19.02■□□□□ 0.64
SHKBP1-214ENST00000597396 LMNTD1Q8N9Z9 388 aa19.02■□□□□ 0.64
SHKBP1-214ENST00000597396 FBXO15Q8NCQ5 510 aaPredicted RBP19.02■□□□□ 0.64
SHKBP1-214ENST00000597396 UHMK1Q8TAS1 419 aaKnown RBP19.02■□□□□ 0.64
SHKBP1-214ENST00000597396 KLHL6Q8WZ60 621 aa19.02■□□□□ 0.64
SHKBP1-214ENST00000597396 PPM1MQ96MI6 270 aa19.02■□□□□ 0.64
SHKBP1-214ENST00000597396 ZNF578Q96N58 590 aaPredicted RBP19.02■□□□□ 0.64
SHKBP1-214ENST00000597396 FUT8Q9BYC5 575 aa19.02■□□□□ 0.64
SHKBP1-214ENST00000597396 ANKZF1Q9H8Y5 726 aa19.02■□□□□ 0.64
SHKBP1-214ENST00000597396 CAB39LQ9H9S4 337 aa19.02■□□□□ 0.64
SHKBP1-214ENST00000597396 POPDC3Q9HBV1 291 aa19.02■□□□□ 0.64
SHKBP1-214ENST00000597396 GPAMQ9HCL2 828 aa19.02■□□□□ 0.64
SHKBP1-214ENST00000597396 ASCL3Q9NQ33 180 aa19.02■□□□□ 0.64
SHKBP1-214ENST00000597396 SOHLH2Q9NX45 425 aa19.02■□□□□ 0.64
SHKBP1-214ENST00000597396 SLC39A1Q9NY26 324 aa19.02■□□□□ 0.64
SHKBP1-214ENST00000597396 SEMA5BQ9P283 1151 aa19.02■□□□□ 0.64
SHKBP1-214ENST00000597396 LHX6Q9UPM6 363 aa19.02■□□□□ 0.64
SHKBP1-214ENST00000597396 ACACAQ13085 2346 aa19.02■□□□□ 0.64
SHKBP1-214ENST00000597396 CACNA1GO43497 2377 aa19.01■□□□□ 0.63
SHKBP1-214ENST00000597396 B4E171 279 aa19.01■□□□□ 0.63
SHKBP1-214ENST00000597396 MYO1CO00159 1063 aa19.01■□□□□ 0.63
SHKBP1-214ENST00000597396 ZBTB11O95625 1053 aaPredicted RBP19.01■□□□□ 0.63
SHKBP1-214ENST00000597396 CAPNS1P04632 268 aa19.01■□□□□ 0.63
SHKBP1-214ENST00000597396 MYBL2P10244 700 aa19.01■□□□□ 0.63
SHKBP1-214ENST00000597396 STMN1P16949 149 aa19.01■□□□□ 0.63
SHKBP1-214ENST00000597396 NELFEP18615 380 aaKnown RBP19.01■□□□□ 0.63
SHKBP1-214ENST00000597396 TSPAN7P41732 249 aa19.01■□□□□ 0.63
SHKBP1-214ENST00000597396 TBC1D25Q3MII6 688 aa19.01■□□□□ 0.63
SHKBP1-214ENST00000597396 CEP97Q8IW35 865 aa19.01■□□□□ 0.63
SHKBP1-214ENST00000597396 LINC01555Q8NAE3 123 aa19.01■□□□□ 0.63
SHKBP1-214ENST00000597396 MCOLN3Q8TDD5 553 aa19.01■□□□□ 0.63
SHKBP1-214ENST00000597396 USP7Q93009 1102 aa19.01■□□□□ 0.63
SHKBP1-214ENST00000597396 SLC22A18Q96BI1 424 aa19.01■□□□□ 0.63
SHKBP1-214ENST00000597396 OR2A14Q96R47 310 aa19.01■□□□□ 0.63
SHKBP1-214ENST00000597396 TAAR9Q96RI9 348 aa19.01■□□□□ 0.63
SHKBP1-214ENST00000597396 PKP4Q99569 1192 aa19.01■□□□□ 0.63
SHKBP1-214ENST00000597396 IKBKGQ9Y6K9 419 aa19.01■□□□□ 0.63
SHKBP1-214ENST00000597396 WDFY3Q8IZQ1 3526 aa19.01■□□□□ 0.63
SHKBP1-214ENST00000597396 HEATR5BQ9P2D3 2071 aa19.01■□□□□ 0.63
SHKBP1-214ENST00000597396 SLC9B1P1A6NJY1 282 aa19■□□□□ 0.63
SHKBP1-214ENST00000597396 ZNF839A8K0R7 811 aa19■□□□□ 0.63
SHKBP1-214ENST00000597396 SLC16A5O15375 505 aa19■□□□□ 0.63
SHKBP1-214ENST00000597396 PHGDHO43175 533 aaKnown RBP19■□□□□ 0.63
SHKBP1-214ENST00000597396 MAP3K7O43318 606 aa19■□□□□ 0.63
SHKBP1-214ENST00000597396 TSPAN12O95859 305 aa19■□□□□ 0.63
SHKBP1-214ENST00000597396 INHBAP08476 426 aa19■□□□□ 0.63
SHKBP1-214ENST00000597396 PEBP1P30086 187 aaKnown RBP19■□□□□ 0.63
SHKBP1-214ENST00000597396 RAB15P59190 212 aa19■□□□□ 0.63
SHKBP1-214ENST00000597396 ERVPABLB-1P60509 514 aa19■□□□□ 0.63
SHKBP1-214ENST00000597396 MC2RQ01718 297 aa19■□□□□ 0.63
SHKBP1-214ENST00000597396 FOXM1Q08050 763 aa19■□□□□ 0.63
SHKBP1-214ENST00000597396 TMEM207Q6UWW9 146 aa19■□□□□ 0.63
SHKBP1-214ENST00000597396 TRIM73Q86UV7 250 aa19■□□□□ 0.63
SHKBP1-214ENST00000597396 RASGRP3Q8IV61 690 aa19■□□□□ 0.63
SHKBP1-214ENST00000597396 DENND1AQ8TEH3 1009 aa19■□□□□ 0.63
SHKBP1-214ENST00000597396 PDLIM5Q96HC4 596 aaKnown RBP19■□□□□ 0.63
SHKBP1-214ENST00000597396 SLC41A2Q96JW4 573 aa19■□□□□ 0.63
SHKBP1-214ENST00000597396 ADAMTS6Q9UKP5 1117 aa19■□□□□ 0.63
SHKBP1-214ENST00000597396 A0A0J9YY10 115 aa18.99■□□□□ 0.63
SHKBP1-214ENST00000597396 CDRT15L2A8MXV6 281 aa18.99■□□□□ 0.63
SHKBP1-214ENST00000597396 POC1B-GALNT4F8VUJ3 575 aa18.99■□□□□ 0.63
SHKBP1-214ENST00000597396 RIPK2O43353 540 aa18.99■□□□□ 0.63
SHKBP1-214ENST00000597396 ABHD2P08910 425 aa18.99■□□□□ 0.63
SHKBP1-214ENST00000597396 HIST1H2AGP0C0S8 130 aaPredicted RBP18.99■□□□□ 0.63
SHKBP1-214ENST00000597396 PVRP15151 417 aa18.99■□□□□ 0.63
SHKBP1-214ENST00000597396 ST6GAL1P15907 406 aa18.99■□□□□ 0.63
SHKBP1-214ENST00000597396 HIST1H2ADP20671 130 aa18.99■□□□□ 0.63
SHKBP1-214ENST00000597396 OAS2P29728 719 aaKnown RBP18.99■□□□□ 0.63
SHKBP1-214ENST00000597396 SLC5A2P31639 672 aa18.99■□□□□ 0.63
SHKBP1-214ENST00000597396 HSD17B2P37059 387 aa18.99■□□□□ 0.63
SHKBP1-214ENST00000597396 PNLIPRP1P54315 467 aa18.99■□□□□ 0.63
SHKBP1-214ENST00000597396 RAB10P61026 200 aa18.99■□□□□ 0.63
SHKBP1-214ENST00000597396 SH3BP2P78314 561 aa18.99■□□□□ 0.63
SHKBP1-214ENST00000597396 HSD11B2P80365 405 aa18.99■□□□□ 0.63
SHKBP1-214ENST00000597396 TSTA3Q13630 321 aaPredicted RBP18.99■□□□□ 0.63
SHKBP1-214ENST00000597396 ARHGAP19Q14CB8 494 aa18.99■□□□□ 0.63
SHKBP1-214ENST00000597396 CYP2A13Q16696 494 aa18.99■□□□□ 0.63
SHKBP1-214ENST00000597396 SLC5A12Q1EHB4 618 aa18.99■□□□□ 0.63
SHKBP1-214ENST00000597396 TMTC4Q5T4D3 741 aa18.99■□□□□ 0.63
SHKBP1-214ENST00000597396 CYB5D1Q6P9G0 228 aa18.99■□□□□ 0.63
SHKBP1-214ENST00000597396 CEACAM20Q6UY09 585 aa18.99■□□□□ 0.63
SHKBP1-214ENST00000597396 RAPH1Q70E73 1250 aa18.99■□□□□ 0.63
SHKBP1-214ENST00000597396 CLEC14AQ86T13 490 aa18.99■□□□□ 0.63
SHKBP1-214ENST00000597396 BMPERQ8N8U9 685 aa18.99■□□□□ 0.63
SHKBP1-214ENST00000597396 HMGCLL1Q8TB92 370 aa18.99■□□□□ 0.63
SHKBP1-214ENST00000597396 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP18.99■□□□□ 0.63
SHKBP1-214ENST00000597396 HIST1H2AHQ96KK5 128 aa18.99■□□□□ 0.63
SHKBP1-214ENST00000597396 HIST1H2AJQ99878 128 aa18.99■□□□□ 0.63
SHKBP1-214ENST00000597396 H2AFJQ9BTM1 129 aa18.99■□□□□ 0.63
SHKBP1-214ENST00000597396 SLC12A9Q9BXP2 914 aa18.99■□□□□ 0.63
SHKBP1-214ENST00000597396 TRIM54Q9BYV2 358 aa18.99■□□□□ 0.63
SHKBP1-214ENST00000597396 PITPNM3Q9BZ71 974 aa18.99■□□□□ 0.63
SHKBP1-214ENST00000597396 KLHL25Q9H0H3 589 aa18.99■□□□□ 0.63
SHKBP1-214ENST00000597396 PARVBQ9HBI1 364 aa18.99■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms