RNA–Protein interactions for RNA: ENST00000597136.1

TRIM28-207, Transcript of tripartite motif containing 28, humanhuman

TSL 2

Gene TRIM28, Length 1,552 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-207ENST00000597136 EMCNQ9ULC0 261 aa14.56□□□□□ -0.08
TRIM28-207ENST00000597136 KRT87PA6NCN2 255 aa14.56□□□□□ -0.08
TRIM28-207ENST00000597136 LILRA5A6NI73 299 aa14.56□□□□□ -0.08
TRIM28-207ENST00000597136 D6RAR5 112 aa14.56□□□□□ -0.08
TRIM28-207ENST00000597136 CDC7O00311 574 aa14.56□□□□□ -0.08
TRIM28-207ENST00000597136 CSO75390 466 aaKnown RBP14.56□□□□□ -0.08
TRIM28-207ENST00000597136 MPC1LP0DKB6 136 aa14.56□□□□□ -0.08
TRIM28-207ENST00000597136 TFEBP19484 476 aa14.56□□□□□ -0.08
TRIM28-207ENST00000597136 NR1D1P20393 614 aa14.56□□□□□ -0.08
TRIM28-207ENST00000597136 PPM1FP49593 454 aaPredicted RBP14.56□□□□□ -0.08
TRIM28-207ENST00000597136 SLC18A1P54219 525 aa14.56□□□□□ -0.08
TRIM28-207ENST00000597136 KRT33BQ14525 404 aa14.56□□□□□ -0.08
TRIM28-207ENST00000597136 ISXQ2M1V0 245 aa14.56□□□□□ -0.08
TRIM28-207ENST00000597136 C16orf46Q6P387 395 aa14.56□□□□□ -0.08
TRIM28-207ENST00000597136 RBM44Q6ZP01 1051 aaKnown RBP14.56□□□□□ -0.08
TRIM28-207ENST00000597136 ISCA2Q86U28 154 aa14.56□□□□□ -0.08
TRIM28-207ENST00000597136 GALNT15Q8N3T1 639 aa14.56□□□□□ -0.08
TRIM28-207ENST00000597136 LMNTD1Q8N9Z9 388 aa14.56□□□□□ -0.08
TRIM28-207ENST00000597136 TCP10LQ8TDR4 215 aa14.56□□□□□ -0.08
TRIM28-207ENST00000597136 SKA2Q8WVK7 121 aaPredicted RBP14.56□□□□□ -0.08
TRIM28-207ENST00000597136 RSC1A1Q92681 617 aa14.56□□□□□ -0.08
TRIM28-207ENST00000597136 KIAA1191Q96A73 305 aa14.56□□□□□ -0.08
TRIM28-207ENST00000597136 PTERQ96BW5 349 aa14.56□□□□□ -0.08
TRIM28-207ENST00000597136 HGH1Q9BTY7 390 aa14.56□□□□□ -0.08
TRIM28-207ENST00000597136 IQCGQ9H095 443 aaKnown RBP14.56□□□□□ -0.08
TRIM28-207ENST00000597136 KIR3DX1Q9H7L2 352 aa14.56□□□□□ -0.08
TRIM28-207ENST00000597136 SLC17A7Q9P2U7 560 aa14.56□□□□□ -0.08
TRIM28-207ENST00000597136 ASF1AQ9Y294 204 aa14.56□□□□□ -0.08
TRIM28-207ENST00000597136 ENTPD2Q9Y5L3 495 aa14.56□□□□□ -0.08
TRIM28-207ENST00000597136 COLEC10Q9Y6Z7 277 aa14.56□□□□□ -0.08
TRIM28-207ENST00000597136 SDK2Q58EX2 2172 aa14.55□□□□□ -0.08
TRIM28-207ENST00000597136 URB1O60287 2271 aaKnown RBP14.55□□□□□ -0.08
TRIM28-207ENST00000597136 CELSR3Q9NYQ7 3312 aa14.55□□□□□ -0.08
TRIM28-207ENST00000597136 ANKRD11Q6UB99 2663 aaPredicted RBP14.55□□□□□ -0.08
TRIM28-207ENST00000597136 A0A1W2PNU3 283 aaPredicted RBP14.55□□□□□ -0.08
TRIM28-207ENST00000597136 FAM221BA6H8Z2 402 aa14.55□□□□□ -0.08
TRIM28-207ENST00000597136 BTN3A1O00481 513 aa14.55□□□□□ -0.08
TRIM28-207ENST00000597136 TM9SF1O15321 606 aa14.55□□□□□ -0.08
TRIM28-207ENST00000597136 UBXN7O94888 489 aa14.55□□□□□ -0.08
TRIM28-207ENST00000597136 ZWINTO95229 277 aa14.55□□□□□ -0.08
TRIM28-207ENST00000597136 MATN4O95460 622 aa14.55□□□□□ -0.08
TRIM28-207ENST00000597136 CPNE6O95741 557 aa14.55□□□□□ -0.08
TRIM28-207ENST00000597136 PROS1P07225 676 aa14.55□□□□□ -0.08
TRIM28-207ENST00000597136 KCNC1P48547 511 aa14.55□□□□□ -0.08
TRIM28-207ENST00000597136 KPNA2P52292 529 aaKnown RBP14.55□□□□□ -0.08
TRIM28-207ENST00000597136 PPP1CAP62136 330 aa14.55□□□□□ -0.08
TRIM28-207ENST00000597136 PPP2R2AP63151 447 aa14.55□□□□□ -0.08
TRIM28-207ENST00000597136 SQSTM1Q13501 440 aa14.55□□□□□ -0.08
TRIM28-207ENST00000597136 CAMK2BQ13554 666 aa14.55□□□□□ -0.08
TRIM28-207ENST00000597136 OR4D1Q15615 310 aa14.55□□□□□ -0.08
TRIM28-207ENST00000597136 CCSMST1Q4G0I0 132 aa14.55□□□□□ -0.08
TRIM28-207ENST00000597136 TMEM151AQ8N4L1 468 aa14.55□□□□□ -0.08
TRIM28-207ENST00000597136 AVL9Q8NBF6 648 aa14.55□□□□□ -0.08
TRIM28-207ENST00000597136 OR4E2Q8NGC2 313 aa14.55□□□□□ -0.08
TRIM28-207ENST00000597136 OR10G6Q8NH81 332 aa14.55□□□□□ -0.08
TRIM28-207ENST00000597136 DENND1AQ8TEH3 1009 aa14.55□□□□□ -0.08
TRIM28-207ENST00000597136 ASB11Q8WXH4 323 aa14.55□□□□□ -0.08
TRIM28-207ENST00000597136 AHCYL2Q96HN2 611 aaKnown RBP14.55□□□□□ -0.08
TRIM28-207ENST00000597136 SCYL1Q96KG9 808 aa14.55□□□□□ -0.08
TRIM28-207ENST00000597136 MRPL57Q9BQC6 102 aaKnown RBP14.55□□□□□ -0.08
TRIM28-207ENST00000597136 SELENOSQ9BQE4 189 aa14.55□□□□□ -0.08
TRIM28-207ENST00000597136 TFB2MQ9H5Q4 396 aaKnown RBP14.55□□□□□ -0.08
TRIM28-207ENST00000597136 XKR8Q9H6D3 395 aa14.55□□□□□ -0.08
TRIM28-207ENST00000597136 ALG9Q9H6U8 611 aa14.55□□□□□ -0.08
TRIM28-207ENST00000597136 PLAGL1Q9UM63 463 aa14.55□□□□□ -0.08
TRIM28-207ENST00000597136 TDRKHQ9Y2W6 561 aaKnown RBP14.55□□□□□ -0.08
TRIM28-207ENST00000597136 HEBP2Q9Y5Z4 205 aa14.55□□□□□ -0.08
TRIM28-207ENST00000597136 CCDC189A1A4V9 331 aa14.54□□□□□ -0.08
TRIM28-207ENST00000597136 PMS2P1A4D2B8 440 aa14.54□□□□□ -0.08
TRIM28-207ENST00000597136 NPEPPSL1A6NEC2 478 aa14.54□□□□□ -0.08
TRIM28-207ENST00000597136 GFYI3L273 518 aa14.54□□□□□ -0.08
TRIM28-207ENST00000597136 PLIN3O60664 434 aa14.54□□□□□ -0.08
TRIM28-207ENST00000597136 PROCP04070 461 aa14.54□□□□□ -0.08
TRIM28-207ENST00000597136 RBP1P09455 135 aa14.54□□□□□ -0.08
TRIM28-207ENST00000597136 AMD1P17707 334 aa14.54□□□□□ -0.08
TRIM28-207ENST00000597136 EPHA4P54764 986 aa14.54□□□□□ -0.08
TRIM28-207ENST00000597136 GFERP55789 205 aa14.54□□□□□ -0.08
TRIM28-207ENST00000597136 GPLD1P80108 840 aa14.54□□□□□ -0.08
TRIM28-207ENST00000597136 PLCL1Q15111 1095 aa14.54□□□□□ -0.08
TRIM28-207ENST00000597136 TSNQ15631 228 aaKnown RBP14.54□□□□□ -0.08
TRIM28-207ENST00000597136 CCDC153Q494R4 210 aa14.54□□□□□ -0.08
TRIM28-207ENST00000597136 TECRLQ5HYJ1 363 aa14.54□□□□□ -0.08
TRIM28-207ENST00000597136 SNAP47Q5SQN1 464 aa14.54□□□□□ -0.08
TRIM28-207ENST00000597136 RASGRP3Q8IV61 690 aa14.54□□□□□ -0.08
TRIM28-207ENST00000597136 SLITRK4Q8IW52 837 aa14.54□□□□□ -0.08
TRIM28-207ENST00000597136 RBM12BQ8IXT5 1001 aaKnown RBP14.54□□□□□ -0.08
TRIM28-207ENST00000597136 RCBTB1Q8NDN9 531 aa14.54□□□□□ -0.08
TRIM28-207ENST00000597136 OR52E1Q8NGJ3 308 aa14.54□□□□□ -0.08
TRIM28-207ENST00000597136 RHEBL1Q8TAI7 183 aa14.54□□□□□ -0.08
TRIM28-207ENST00000597136 FAM111AQ96PZ2 611 aa14.54□□□□□ -0.08
TRIM28-207ENST00000597136 MRPL46Q9H2W6 279 aaKnown RBP14.54□□□□□ -0.08
TRIM28-207ENST00000597136 MVB12BQ9H7P6 319 aa14.54□□□□□ -0.08
TRIM28-207ENST00000597136 ADAMTS6Q9UKP5 1117 aa14.54□□□□□ -0.08
TRIM28-207ENST00000597136 IGHV5-10-1A0A0J9YXX1 117 aa14.53□□□□□ -0.08
TRIM28-207ENST00000597136 A8MU76 341 aa14.53□□□□□ -0.08
TRIM28-207ENST00000597136 TARM1B6A8C7 271 aa14.53□□□□□ -0.08
TRIM28-207ENST00000597136 KIF1CO43896 1103 aaKnown RBP14.53□□□□□ -0.08
TRIM28-207ENST00000597136 C8GP07360 202 aa14.53□□□□□ -0.08
TRIM28-207ENST00000597136 SBK3P0C264 359 aa14.53□□□□□ -0.08
TRIM28-207ENST00000597136 OAS2P29728 719 aaKnown RBP14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms