RNA–Protein interactions for RNA: ENST00000592535.5

APOC1-208, Transcript of apolipoprotein C1, humanhuman

TSL 1 (best)

Gene APOC1, Length 430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-208ENST00000592535 ABHD17AQ96GS6 310 aa13.38□□□□□ -0.27
APOC1-208ENST00000592535 SLC7A5P2Q9GIP4 190 aa13.38□□□□□ -0.27
APOC1-208ENST00000592535 CHRNA10Q9GZZ6 450 aa13.38□□□□□ -0.27
APOC1-208ENST00000592535 SPRTNQ9H040 489 aaPredicted RBP13.38□□□□□ -0.27
APOC1-208ENST00000592535 ZNF71Q9NQZ8 489 aaPredicted RBP13.38□□□□□ -0.27
APOC1-208ENST00000592535 GALPQ9UBC7 116 aa13.38□□□□□ -0.27
APOC1-208ENST00000592535 SLC39A10Q9ULF5 831 aa13.38□□□□□ -0.27
APOC1-208ENST00000592535 MAN2B2Q9Y2E5 1009 aa13.38□□□□□ -0.27
APOC1-208ENST00000592535 PCM1Q15154 2024 aa13.37□□□□□ -0.27
APOC1-208ENST00000592535 HELZ2Q9BYK8 2649 aaKnown RBP13.37□□□□□ -0.27
APOC1-208ENST00000592535 MED13Q9UHV7 2174 aa13.37□□□□□ -0.27
APOC1-208ENST00000592535 ZCWPW2A0A1B0GU75 182 aa13.37□□□□□ -0.27
APOC1-208ENST00000592535 MAGEB16A2A368 324 aa13.37□□□□□ -0.27
APOC1-208ENST00000592535 H3BMM5 538 aa13.37□□□□□ -0.27
APOC1-208ENST00000592535 PFDN6O15212 129 aa13.37□□□□□ -0.27
APOC1-208ENST00000592535 SUV39H1O43463 412 aa13.37□□□□□ -0.27
APOC1-208ENST00000592535 OR2B3O76000 313 aa13.37□□□□□ -0.27
APOC1-208ENST00000592535 ZIC2O95409 532 aaPredicted RBP13.37□□□□□ -0.27
APOC1-208ENST00000592535 C1orf105O95561 183 aa13.37□□□□□ -0.27
APOC1-208ENST00000592535 ESR1P03372 595 aa13.37□□□□□ -0.27
APOC1-208ENST00000592535 CAPN1P07384 714 aa13.37□□□□□ -0.27
APOC1-208ENST00000592535 PKMP14618 531 aaKnown RBP13.37□□□□□ -0.27
APOC1-208ENST00000592535 MAGP20916 626 aa13.37□□□□□ -0.27
APOC1-208ENST00000592535 ADARP55265 1226 aaKnown RBP13.37□□□□□ -0.27
APOC1-208ENST00000592535 GBX1Q14549 363 aa13.37□□□□□ -0.27
APOC1-208ENST00000592535 UGT8Q16880 541 aa13.37□□□□□ -0.27
APOC1-208ENST00000592535 FAM69BQ5VUD6 431 aa13.37□□□□□ -0.27
APOC1-208ENST00000592535 ZNF385CQ66K41 422 aaPredicted RBP13.37□□□□□ -0.27
APOC1-208ENST00000592535 ZNF470Q6ECI4 717 aa13.37□□□□□ -0.27
APOC1-208ENST00000592535 TTC23LQ6PF05 361 aa13.37□□□□□ -0.27
APOC1-208ENST00000592535 DENND6AQ8IWF6 608 aa13.37□□□□□ -0.27
APOC1-208ENST00000592535 PPIL6Q8IXY8 311 aa13.37□□□□□ -0.27
APOC1-208ENST00000592535 GPR135Q8IZ08 494 aa13.37□□□□□ -0.27
APOC1-208ENST00000592535 DNAJC22Q8N4W6 341 aa13.37□□□□□ -0.27
APOC1-208ENST00000592535 ENDOVQ8N8Q3 282 aaKnown RBP13.37□□□□□ -0.27
APOC1-208ENST00000592535 RAD51AP1Q96B01 352 aa13.37□□□□□ -0.27
APOC1-208ENST00000592535 DDX47Q9H0S4 455 aaKnown RBP13.37□□□□□ -0.27
APOC1-208ENST00000592535 MAD1L1Q9Y6D9 718 aa13.37□□□□□ -0.27
APOC1-208ENST00000592535 TNRC6AQ8NDV7 1962 aaKnown RBP13.37□□□□□ -0.27
APOC1-208ENST00000592535 CTAGE9A4FU28 777 aa13.36□□□□□ -0.27
APOC1-208ENST00000592535 S1PR4O95977 384 aa13.36□□□□□ -0.27
APOC1-208ENST00000592535 HBQ1P09105 142 aa13.36□□□□□ -0.27
APOC1-208ENST00000592535 RAB40ALP0C0E4 278 aa13.36□□□□□ -0.27
APOC1-208ENST00000592535 CHRM3P20309 590 aa13.36□□□□□ -0.27
APOC1-208ENST00000592535 NR1D1P20393 614 aa13.36□□□□□ -0.27
APOC1-208ENST00000592535 PMS2P54278 862 aa13.36□□□□□ -0.27
APOC1-208ENST00000592535 CTBP1Q13363 440 aa13.36□□□□□ -0.27
APOC1-208ENST00000592535 THOC5Q13769 683 aaKnown RBP13.36□□□□□ -0.27
APOC1-208ENST00000592535 PPP1R7Q15435 360 aa13.36□□□□□ -0.27
APOC1-208ENST00000592535 RNASEH2BQ5TBB1 312 aaKnown RBP13.36□□□□□ -0.27
APOC1-208ENST00000592535 ATG14Q6ZNE5 492 aa13.36□□□□□ -0.27
APOC1-208ENST00000592535 SPNS2Q8IVW8 549 aa13.36□□□□□ -0.27
APOC1-208ENST00000592535 ZBTB2Q8N680 514 aa13.36□□□□□ -0.27
APOC1-208ENST00000592535 ZNF655Q8N720 491 aaPredicted RBP13.36□□□□□ -0.27
APOC1-208ENST00000592535 DENND1AQ8TEH3 1009 aa13.36□□□□□ -0.27
APOC1-208ENST00000592535 SEC14L1Q92503 715 aa13.36□□□□□ -0.27
APOC1-208ENST00000592535 SLC22A18Q96BI1 424 aa13.36□□□□□ -0.27
APOC1-208ENST00000592535 SIGLEC10Q96LC7 697 aa13.36□□□□□ -0.27
APOC1-208ENST00000592535 FOPNLQ96NB1 174 aa13.36□□□□□ -0.27
APOC1-208ENST00000592535 RAB11FIP5Q9BXF6 653 aa13.36□□□□□ -0.27
APOC1-208ENST00000592535 NLNQ9BYT8 704 aa13.36□□□□□ -0.27
APOC1-208ENST00000592535 TRIM55Q9BYV6 548 aa13.36□□□□□ -0.27
APOC1-208ENST00000592535 TRIM4Q9C037 500 aa13.36□□□□□ -0.27
APOC1-208ENST00000592535 FBXO6Q9NRD1 293 aaPredicted RBP13.36□□□□□ -0.27
APOC1-208ENST00000592535 INTS10Q9NVR2 710 aaKnown RBP13.36□□□□□ -0.27
APOC1-208ENST00000592535 CAMSAP3Q9P1Y5 1249 aaPredicted RBP13.36□□□□□ -0.27
APOC1-208ENST00000592535 SNX7Q9UNH6 387 aa13.36□□□□□ -0.27
APOC1-208ENST00000592535 PLCL2Q9UPR0 1127 aa13.36□□□□□ -0.27
APOC1-208ENST00000592535 SPTA1P02549 2419 aa13.36□□□□□ -0.27
APOC1-208ENST00000592535 E5RI56 91 aa13.35□□□□□ -0.27
APOC1-208ENST00000592535 K7EM74 188 aa13.35□□□□□ -0.27
APOC1-208ENST00000592535 ZSCAN9O15535 394 aaPredicted RBP13.35□□□□□ -0.27
APOC1-208ENST00000592535 PRICKLE3O43900 615 aaPredicted RBP13.35□□□□□ -0.27
APOC1-208ENST00000592535 RFPL1O75677 317 aa13.35□□□□□ -0.27
APOC1-208ENST00000592535 DNAJB5O75953 348 aa13.35□□□□□ -0.27
APOC1-208ENST00000592535 USP1O94782 785 aa13.35□□□□□ -0.27
APOC1-208ENST00000592535 MATN4O95460 622 aa13.35□□□□□ -0.27
APOC1-208ENST00000592535 ATXN8OSP0DMR3 200 aa13.35□□□□□ -0.27
APOC1-208ENST00000592535 CBSLP0DN79 551 aa13.35□□□□□ -0.27
APOC1-208ENST00000592535 TCP1P17987 556 aaKnown RBP13.35□□□□□ -0.27
APOC1-208ENST00000592535 PSMB5P28074 263 aa13.35□□□□□ -0.27
APOC1-208ENST00000592535 ATP5DP30049 168 aa13.35□□□□□ -0.27
APOC1-208ENST00000592535 CBSP35520 551 aa13.35□□□□□ -0.27
APOC1-208ENST00000592535 CCNFP41002 786 aa13.35□□□□□ -0.27
APOC1-208ENST00000592535 NCF4Q15080 339 aa13.35□□□□□ -0.27
APOC1-208ENST00000592535 SF1Q15637 639 aaKnown RBP13.35□□□□□ -0.27
APOC1-208ENST00000592535 LACTB2Q53H82 288 aaPredicted RBP13.35□□□□□ -0.27
APOC1-208ENST00000592535 ACSBG2Q5FVE4 666 aa13.35□□□□□ -0.27
APOC1-208ENST00000592535 C1orf189Q5VU69 101 aa13.35□□□□□ -0.27
APOC1-208ENST00000592535 CPZQ66K79 652 aa13.35□□□□□ -0.27
APOC1-208ENST00000592535 FCRL6Q6DN72 434 aa13.35□□□□□ -0.27
APOC1-208ENST00000592535 RHBDD2Q6NTF9 364 aa13.35□□□□□ -0.27
APOC1-208ENST00000592535 ADAMTS17Q8TE56 1095 aa13.35□□□□□ -0.27
APOC1-208ENST00000592535 THAP4Q8WY91 577 aa13.35□□□□□ -0.27
APOC1-208ENST00000592535 SLC30A3Q99726 388 aa13.35□□□□□ -0.27
APOC1-208ENST00000592535 DPH2Q9BQC3 489 aaPredicted RBP13.35□□□□□ -0.27
APOC1-208ENST00000592535 C20orf96Q9NUD7 363 aaPredicted RBP13.35□□□□□ -0.27
APOC1-208ENST00000592535 IRAK4Q9NWZ3 460 aa13.35□□□□□ -0.27
APOC1-208ENST00000592535 EURLQ9NYK6 297 aa13.35□□□□□ -0.27
APOC1-208ENST00000592535 DHCR7Q9UBM7 475 aaKnown RBP13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms