RNA–Protein interactions for RNA: ENST00000589520.1

VPS25-203, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 3

Gene VPS25, Length 639 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-203ENST00000589520 BRF2Q9HAW0 419 aa10.12□□□□□ -0.79
VPS25-203ENST00000589520 ACTR3BQ9P1U1 418 aa10.12□□□□□ -0.79
VPS25-203ENST00000589520 TSR3Q9UJK0 312 aaKnown RBP10.12□□□□□ -0.79
VPS25-203ENST00000589520 SCML1Q9UN30 329 aa10.12□□□□□ -0.79
VPS25-203ENST00000589520 SLC22A14Q9Y267 594 aa10.12□□□□□ -0.79
VPS25-203ENST00000589520 AP4S1Q9Y587 144 aa10.12□□□□□ -0.79
VPS25-203ENST00000589520 PCDHGA11Q9Y5H2 935 aa10.12□□□□□ -0.79
VPS25-203ENST00000589520 PCDHA9Q9Y5H5 950 aa10.12□□□□□ -0.79
VPS25-203ENST00000589520 KCNE2Q9Y6J6 123 aa10.12□□□□□ -0.79
VPS25-203ENST00000589520 STON1Q9Y6Q2 735 aa10.12□□□□□ -0.79
VPS25-203ENST00000589520 DOCK6Q96HP0 2047 aa10.12□□□□□ -0.79
VPS25-203ENST00000589520 MYOFQ9NZM1 2061 aa10.11□□□□□ -0.79
VPS25-203ENST00000589520 PRSS51A0A1B0GVH4 220 aa10.11□□□□□ -0.79
VPS25-203ENST00000589520 ZNF839A8K0R7 811 aa10.11□□□□□ -0.79
VPS25-203ENST00000589520 ARHGEF33A8MVX0 844 aa10.11□□□□□ -0.79
VPS25-203ENST00000589520 LILRB5O75023 590 aa10.11□□□□□ -0.79
VPS25-203ENST00000589520 POP7O75817 140 aaKnown RBP10.11□□□□□ -0.79
VPS25-203ENST00000589520 MYO1DO94832 1006 aa10.11□□□□□ -0.79
VPS25-203ENST00000589520 SORBS2O94875 1100 aaKnown RBP10.11□□□□□ -0.79
VPS25-203ENST00000589520 KCNH1O95259 989 aa10.11□□□□□ -0.79
VPS25-203ENST00000589520 C1orf105O95561 183 aa10.11□□□□□ -0.79
VPS25-203ENST00000589520 SOD1P00441 154 aa10.11□□□□□ -0.79
VPS25-203ENST00000589520 EPORP19235 508 aa10.11□□□□□ -0.79
VPS25-203ENST00000589520 IL10P22301 178 aa10.11□□□□□ -0.79
VPS25-203ENST00000589520 VARSP26640 1264 aaKnown RBP10.11□□□□□ -0.79
VPS25-203ENST00000589520 HTR1EP28566 365 aa10.11□□□□□ -0.79
VPS25-203ENST00000589520 P2RY2P41231 377 aa10.11□□□□□ -0.79
VPS25-203ENST00000589520 ZFP36L2P47974 494 aaKnown RBP10.11□□□□□ -0.79
VPS25-203ENST00000589520 HTR6P50406 440 aa10.11□□□□□ -0.79
VPS25-203ENST00000589520 NME5P56597 212 aa10.11□□□□□ -0.79
VPS25-203ENST00000589520 CLDN8P56748 225 aa10.11□□□□□ -0.79
VPS25-203ENST00000589520 PFN3P60673 137 aa10.11□□□□□ -0.79
VPS25-203ENST00000589520 RPL38P63173 70 aaKnown RBP10.11□□□□□ -0.79
VPS25-203ENST00000589520 CNTN1Q12860 1018 aa10.11□□□□□ -0.79
VPS25-203ENST00000589520 CHIT1Q13231 466 aa10.11□□□□□ -0.79
VPS25-203ENST00000589520 LAPTM5Q13571 262 aa10.11□□□□□ -0.79
VPS25-203ENST00000589520 KIAA0040Q15053 153 aa10.11□□□□□ -0.79
VPS25-203ENST00000589520 CPSF6Q16630 551 aaKnown RBP eCLIP10.11□□□□□ -0.79
VPS25-203ENST00000589520 DPY19L1Q2PZI1 675 aa10.11□□□□□ -0.79
VPS25-203ENST00000589520 POM121L1PQ3SYA9 428 aa10.11□□□□□ -0.79
VPS25-203ENST00000589520 ZNF658BQ4V348 819 aaPredicted RBP10.11□□□□□ -0.79
VPS25-203ENST00000589520 MTX3Q5HYI7 312 aa10.11□□□□□ -0.79
VPS25-203ENST00000589520 PIP5KL1Q5T9C9 394 aa10.11□□□□□ -0.79
VPS25-203ENST00000589520 OGFRL1Q5TC84 451 aaPredicted RBP10.11□□□□□ -0.79
VPS25-203ENST00000589520 ZNF776Q68DI1 518 aaPredicted RBP10.11□□□□□ -0.79
VPS25-203ENST00000589520 GRHL2Q6ISB3 625 aa10.11□□□□□ -0.79
VPS25-203ENST00000589520 LCN8Q6JVE9 175 aa10.11□□□□□ -0.79
VPS25-203ENST00000589520 GPR153Q6NV75 609 aa10.11□□□□□ -0.79
VPS25-203ENST00000589520 PNCKQ6P2M8 343 aa10.11□□□□□ -0.79
VPS25-203ENST00000589520 NEK5Q6P3R8 708 aa10.11□□□□□ -0.79
VPS25-203ENST00000589520 SCIMPQ6UWF3 145 aa10.11□□□□□ -0.79
VPS25-203ENST00000589520 LAYNQ6UX15 382 aa10.11□□□□□ -0.79
VPS25-203ENST00000589520 FKBP9P1Q75LS8 142 aa10.11□□□□□ -0.79
VPS25-203ENST00000589520 APLFQ8IW19 511 aaPredicted RBP10.11□□□□□ -0.79
VPS25-203ENST00000589520 CFAP206Q8IYR0 622 aa10.11□□□□□ -0.79
VPS25-203ENST00000589520 EFCAB3Q8N7B9 438 aa10.11□□□□□ -0.79
VPS25-203ENST00000589520 BEND7Q8N7W2 519 aaPredicted RBP10.11□□□□□ -0.79
VPS25-203ENST00000589520 ICA1LQ8NDH6 482 aa10.11□□□□□ -0.79
VPS25-203ENST00000589520 HIPK4Q8NE63 616 aa10.11□□□□□ -0.79
VPS25-203ENST00000589520 OR2T34Q8NGX1 318 aa10.11□□□□□ -0.79
VPS25-203ENST00000589520 OR2T3Q8NH03 318 aa10.11□□□□□ -0.79
VPS25-203ENST00000589520 UBE2E3Q969T4 207 aa10.11□□□□□ -0.79
VPS25-203ENST00000589520 RAD51AP1Q96B01 352 aa10.11□□□□□ -0.79
VPS25-203ENST00000589520 GUCD1Q96NT3 240 aa10.11□□□□□ -0.79
VPS25-203ENST00000589520 MYADMQ96S97 322 aa10.11□□□□□ -0.79
VPS25-203ENST00000589520 GDF15Q99988 308 aa10.11□□□□□ -0.79
VPS25-203ENST00000589520 ECSITQ9BQ95 431 aa10.11□□□□□ -0.79
VPS25-203ENST00000589520 C1QTNF7Q9BXJ2 289 aa10.11□□□□□ -0.79
VPS25-203ENST00000589520 PLA2G2FQ9BZM2 168 aa10.11□□□□□ -0.79
VPS25-203ENST00000589520 EHD1Q9H4M9 534 aa10.11□□□□□ -0.79
VPS25-203ENST00000589520 Q9H521 79 aa10.11□□□□□ -0.79
VPS25-203ENST00000589520 RMND5AQ9H871 391 aa10.11□□□□□ -0.79
VPS25-203ENST00000589520 RMI1Q9H9A7 625 aa10.11□□□□□ -0.79
VPS25-203ENST00000589520 TRPV5Q9NQA5 729 aa10.11□□□□□ -0.79
VPS25-203ENST00000589520 C8orf4Q9NR00 106 aa10.11□□□□□ -0.79
VPS25-203ENST00000589520 ARMC1Q9NVT9 282 aa10.11□□□□□ -0.79
VPS25-203ENST00000589520 STOX2Q9P2F5 926 aaPredicted RBP10.11□□□□□ -0.79
VPS25-203ENST00000589520 GIMAP2Q9UG22 337 aa10.11□□□□□ -0.79
VPS25-203ENST00000589520 MBD1Q9UIS9 605 aaPredicted RBP10.11□□□□□ -0.79
VPS25-203ENST00000589520 FXYD1O00168 92 aa10.1□□□□□ -0.79
VPS25-203ENST00000589520 FFAR3O14843 346 aa10.1□□□□□ -0.79
VPS25-203ENST00000589520 INPP4BO15327 924 aa10.1□□□□□ -0.79
VPS25-203ENST00000589520 GPR42O15529 346 aa10.1□□□□□ -0.79
VPS25-203ENST00000589520 HNRNPRO43390 633 aaKnown RBP10.1□□□□□ -0.79
VPS25-203ENST00000589520 PI15O43692 258 aa10.1□□□□□ -0.79
VPS25-203ENST00000589520 ERN1O75460 977 aaKnown RBP10.1□□□□□ -0.79
VPS25-203ENST00000589520 GMNNO75496 209 aa10.1□□□□□ -0.79
VPS25-203ENST00000589520 PDYNP01213 254 aa10.1□□□□□ -0.79
VPS25-203ENST00000589520 GPIP06744 558 aa10.1□□□□□ -0.79
VPS25-203ENST00000589520 RPSAP08865 295 aaKnown RBP10.1□□□□□ -0.79
VPS25-203ENST00000589520 FCGR1AP12314 374 aa10.1□□□□□ -0.79
VPS25-203ENST00000589520 BMP8BP34820 402 aa10.1□□□□□ -0.79
VPS25-203ENST00000589520 HALP42357 657 aa10.1□□□□□ -0.79
VPS25-203ENST00000589520 GALK1P51570 392 aa10.1□□□□□ -0.79
VPS25-203ENST00000589520 RPS14P62263 151 aaKnown RBP10.1□□□□□ -0.79
VPS25-203ENST00000589520 MRPS22P82650 360 aaKnown RBP10.1□□□□□ -0.79
VPS25-203ENST00000589520 MRPS35P82673 323 aaKnown RBP10.1□□□□□ -0.79
VPS25-203ENST00000589520 KLC1Q07866 573 aa10.1□□□□□ -0.79
VPS25-203ENST00000589520 LRRC74AQ0VAA2 488 aa10.1□□□□□ -0.79
VPS25-203ENST00000589520 ADGRE1Q14246 886 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms