RNA–Protein interactions for RNA: ENST00000589117.5

ZNF540-206, Transcript of zinc finger protein 540, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ZNF540, Length 2,349 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-206ENST00000589117 ZNF641Q96N77 438 aaPredicted RBP7.24□□□□□ -1.25
ZNF540-206ENST00000589117 RDH12Q96NR8 316 aa7.24□□□□□ -1.25
ZNF540-206ENST00000589117 SEPHS2Q99611 448 aa7.24□□□□□ -1.25
ZNF540-206ENST00000589117 SLC32A1Q9H598 525 aa7.24□□□□□ -1.25
ZNF540-206ENST00000589117 ACTR8Q9H981 624 aa7.24□□□□□ -1.25
ZNF540-206ENST00000589117 LRTM1Q9HBL6 345 aa7.24□□□□□ -1.25
ZNF540-206ENST00000589117 SMOXQ9NWM0 555 aa7.24□□□□□ -1.25
ZNF540-206ENST00000589117 C1orf109Q9NX04 203 aa7.24□□□□□ -1.25
ZNF540-206ENST00000589117 ARL15Q9NXU5 204 aa7.24□□□□□ -1.25
ZNF540-206ENST00000589117 ASIC5Q9NY37 505 aa7.24□□□□□ -1.25
ZNF540-206ENST00000589117 KLQ9UEF7 1012 aa7.24□□□□□ -1.25
ZNF540-206ENST00000589117 NIPSNAP3AQ9UFN0 247 aaPredicted RBP7.24□□□□□ -1.25
ZNF540-206ENST00000589117 SLC25A13Q9UJS0 675 aa7.24□□□□□ -1.25
ZNF540-206ENST00000589117 POLR3HQ9Y535 204 aaPredicted RBP7.24□□□□□ -1.25
ZNF540-206ENST00000589117 FADS3Q9Y5Q0 445 aa7.24□□□□□ -1.25
ZNF540-206ENST00000589117 ABHD14A-ACY1A0A1B0GW23 586 aa7.23□□□□□ -1.25
ZNF540-206ENST00000589117 TCRBV5S2A0A599 114 aa7.23□□□□□ -1.25
ZNF540-206ENST00000589117 EME2A4GXA9 379 aaPredicted RBP7.23□□□□□ -1.25
ZNF540-206ENST00000589117 FAM149AA5PLN7 773 aa7.23□□□□□ -1.25
ZNF540-206ENST00000589117 ASPDHA6ND91 283 aa7.23□□□□□ -1.25
ZNF540-206ENST00000589117 K7ERQ8 282 aa7.23□□□□□ -1.25
ZNF540-206ENST00000589117 PDLIM1O00151 329 aa7.23□□□□□ -1.25
ZNF540-206ENST00000589117 GNGT2O14610 69 aa7.23□□□□□ -1.25
ZNF540-206ENST00000589117 CLGNO14967 610 aa7.23□□□□□ -1.25
ZNF540-206ENST00000589117 ERN1O75460 977 aaKnown RBP7.23□□□□□ -1.25
ZNF540-206ENST00000589117 POP4O95707 220 aaKnown RBP7.23□□□□□ -1.25
ZNF540-206ENST00000589117 PRPS2P11908 318 aa7.23□□□□□ -1.25
ZNF540-206ENST00000589117 BMP1P13497 986 aa7.23□□□□□ -1.25
ZNF540-206ENST00000589117 NCK1P16333 377 aa7.23□□□□□ -1.25
ZNF540-206ENST00000589117 GABRR2P28476 465 aa7.23□□□□□ -1.25
ZNF540-206ENST00000589117 OXTRP30559 389 aa7.23□□□□□ -1.25
ZNF540-206ENST00000589117 CDK9P50750 372 aaKnown RBP7.23□□□□□ -1.25
ZNF540-206ENST00000589117 NUP107P57740 925 aa7.23□□□□□ -1.25
ZNF540-206ENST00000589117 SLC7A9P82251 487 aa7.23□□□□□ -1.25
ZNF540-206ENST00000589117 DLEU7Q6UYE1 221 aa7.23□□□□□ -1.25
ZNF540-206ENST00000589117 LPCAT2Q7L5N7 544 aa7.23□□□□□ -1.25
ZNF540-206ENST00000589117 APCDD1Q8J025 514 aa7.23□□□□□ -1.25
ZNF540-206ENST00000589117 CLEC4FQ8N1N0 589 aa7.23□□□□□ -1.25
ZNF540-206ENST00000589117 SLC39A11Q8N1S5 342 aa7.23□□□□□ -1.25
ZNF540-206ENST00000589117 OR6K2Q8NGY2 324 aa7.23□□□□□ -1.25
ZNF540-206ENST00000589117 GATAD2BQ8WXI9 593 aa7.23□□□□□ -1.25
ZNF540-206ENST00000589117 EID2BQ96D98 161 aa7.23□□□□□ -1.25
ZNF540-206ENST00000589117 NRBF2Q96F24 287 aa7.23□□□□□ -1.25
ZNF540-206ENST00000589117 TOX2Q96NM4 488 aa7.23□□□□□ -1.25
ZNF540-206ENST00000589117 CCDC115Q96NT0 180 aa7.23□□□□□ -1.25
ZNF540-206ENST00000589117 VN1R3Q9BXE9 311 aa7.23□□□□□ -1.25
ZNF540-206ENST00000589117 CPEB1Q9BZB8 566 aaKnown RBP7.23□□□□□ -1.25
ZNF540-206ENST00000589117 RBM38Q9H0Z9 239 aaKnown RBP7.23□□□□□ -1.25
ZNF540-206ENST00000589117 ZNF576Q9H609 170 aa7.23□□□□□ -1.25
ZNF540-206ENST00000589117 PARVBQ9HBI1 364 aa7.23□□□□□ -1.25
ZNF540-206ENST00000589117 INTS7Q9NVH2 962 aaKnown RBP7.23□□□□□ -1.25
ZNF540-206ENST00000589117 CFAP97Q9P2B7 532 aa7.23□□□□□ -1.25
ZNF540-206ENST00000589117 GPN3Q9UHW5 284 aaPredicted RBP7.23□□□□□ -1.25
ZNF540-206ENST00000589117 PCDHGB4Q9UN71 923 aa7.23□□□□□ -1.25
ZNF540-206ENST00000589117 TMED5Q9Y3A6 229 aa7.23□□□□□ -1.25
ZNF540-206ENST00000589117 PCDHGB5Q9Y5G0 923 aa7.23□□□□□ -1.25
ZNF540-206ENST00000589117 ST14Q9Y5Y6 855 aa7.23□□□□□ -1.25
ZNF540-206ENST00000589117 AGAP14A8MT82 685 aa7.23□□□□□ -1.25
ZNF540-206ENST00000589117 QSOX1O00391 747 aa7.23□□□□□ -1.25
ZNF540-206ENST00000589117 GFRA2O00451 464 aa7.23□□□□□ -1.25
ZNF540-206ENST00000589117 EI24O14681 340 aa7.23□□□□□ -1.25
ZNF540-206ENST00000589117 GRM6O15303 877 aa7.23□□□□□ -1.25
ZNF540-206ENST00000589117 TAPBPO15533 448 aa7.23□□□□□ -1.25
ZNF540-206ENST00000589117 SMAD6O43541 496 aaKnown RBP7.23□□□□□ -1.25
ZNF540-206ENST00000589117 NOL3O60936 208 aaKnown RBP7.23□□□□□ -1.25
ZNF540-206ENST00000589117 EFCAB14O75071 495 aa7.23□□□□□ -1.25
ZNF540-206ENST00000589117 SCELO95171 688 aa7.23□□□□□ -1.25
ZNF540-206ENST00000589117 PRAMEF12O95522 483 aa7.23□□□□□ -1.25
ZNF540-206ENST00000589117 ASLP04424 464 aa7.23□□□□□ -1.25
ZNF540-206ENST00000589117 PGRP06401 933 aa7.23□□□□□ -1.25
ZNF540-206ENST00000589117 UGT1A6P19224 532 aa7.23□□□□□ -1.25
ZNF540-206ENST00000589117 CYP2A7P20853 494 aa7.23□□□□□ -1.25
ZNF540-206ENST00000589117 UGT1A1P22309 533 aa7.23□□□□□ -1.25
ZNF540-206ENST00000589117 UGT1A4P22310 534 aa7.23□□□□□ -1.25
ZNF540-206ENST00000589117 IL12AP29459 219 aa7.23□□□□□ -1.25
ZNF540-206ENST00000589117 CA8P35219 290 aa7.23□□□□□ -1.25
ZNF540-206ENST00000589117 UGT1A3P35503 534 aa7.23□□□□□ -1.25
ZNF540-206ENST00000589117 UGT1A5P35504 534 aa7.23□□□□□ -1.25
ZNF540-206ENST00000589117 RECQLP46063 649 aaPredicted RBP7.23□□□□□ -1.25
ZNF540-206ENST00000589117 ZFP36L2P47974 494 aaKnown RBP7.23□□□□□ -1.25
ZNF540-206ENST00000589117 ALDH3B2P48448 385 aa7.23□□□□□ -1.25
ZNF540-206ENST00000589117 CCINQ13939 588 aa7.23□□□□□ -1.25
ZNF540-206ENST00000589117 MYBPC3Q14896 1274 aa7.23□□□□□ -1.25
ZNF540-206ENST00000589117 FAM174BQ3ZCQ3 159 aa7.23□□□□□ -1.25
ZNF540-206ENST00000589117 ZBED5Q49AG3 693 aa7.23□□□□□ -1.25
ZNF540-206ENST00000589117 TTC23Q5W5X9 447 aa7.23□□□□□ -1.25
ZNF540-206ENST00000589117 C6orf15Q6UXA7 325 aaPredicted RBP7.23□□□□□ -1.25
ZNF540-206ENST00000589117 ISLR2Q6UXK2 745 aa7.23□□□□□ -1.25
ZNF540-206ENST00000589117 LIN28BQ6ZN17 250 aaKnown RBP eCLIP7.23□□□□□ -1.25
ZNF540-206ENST00000589117 LRRC70Q7Z2Q7 622 aa7.23□□□□□ -1.25
ZNF540-206ENST00000589117 TMEM150AQ86TG1 271 aa7.23□□□□□ -1.25
ZNF540-206ENST00000589117 RALGPS2Q86X27 583 aaPredicted RBP7.23□□□□□ -1.25
ZNF540-206ENST00000589117 OR52E4Q8NGH9 312 aa7.23□□□□□ -1.25
ZNF540-206ENST00000589117 MCOLN3Q8TDD5 553 aa7.23□□□□□ -1.25
ZNF540-206ENST00000589117 ADAMTS16Q8TE57 1224 aa7.23□□□□□ -1.25
ZNF540-206ENST00000589117 SKA2Q8WVK7 121 aaPredicted RBP7.23□□□□□ -1.25
ZNF540-206ENST00000589117 WBP2Q969T9 261 aa7.23□□□□□ -1.25
ZNF540-206ENST00000589117 OR52E6Q96RD3 313 aa7.23□□□□□ -1.25
ZNF540-206ENST00000589117 GAS2L1Q99501 681 aaPredicted RBP7.23□□□□□ -1.25
ZNF540-206ENST00000589117 BOCQ9BWV1 1114 aa7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms