RNA–Protein interactions for RNA: ENST00000588555.1

SCAMP4-210, Transcript of secretory carrier membrane protein 4, humanhuman

Gene SCAMP4, Length 1,785 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-210ENST00000588555 C19orf60Q96EN9 201 aa25.27■■□□□ 1.64
SCAMP4-210ENST00000588555 OR4K3Q96R72 315 aa25.27■■□□□ 1.64
SCAMP4-210ENST00000588555 MENTQ9BUN1 341 aa25.27■■□□□ 1.64
SCAMP4-210ENST00000588555 CCDC28BQ9BUN5 200 aa25.27■■□□□ 1.64
SCAMP4-210ENST00000588555 TRIT1Q9H3H1 467 aaKnown RBP25.27■■□□□ 1.64
SCAMP4-210ENST00000588555 WASH6PQ9NQA3 447 aa25.27■■□□□ 1.64
SCAMP4-210ENST00000588555 ZFP69BQ9UJL9 534 aa25.27■■□□□ 1.64
SCAMP4-210ENST00000588555 PCOLCE2Q9UKZ9 415 aa25.27■■□□□ 1.64
SCAMP4-210ENST00000588555 USP34Q70CQ2 3546 aa25.27■■□□□ 1.64
SCAMP4-210ENST00000588555 PDZK1P1A8MUH7 402 aa25.26■■□□□ 1.63
SCAMP4-210ENST00000588555 PIP5K1BO14986 540 aa25.26■■□□□ 1.63
SCAMP4-210ENST00000588555 CRCPO75575 148 aa25.26■■□□□ 1.63
SCAMP4-210ENST00000588555 CAPN1P07384 714 aa25.26■■□□□ 1.63
SCAMP4-210ENST00000588555 ERGP11308 486 aa25.26■■□□□ 1.63
SCAMP4-210ENST00000588555 RACK1P63244 317 aaKnown RBP25.26■■□□□ 1.63
SCAMP4-210ENST00000588555 SPRED3Q2MJR0 410 aa25.26■■□□□ 1.63
SCAMP4-210ENST00000588555 ABRAXAS1Q6UWZ7 409 aa25.26■■□□□ 1.63
SCAMP4-210ENST00000588555 ACAD11Q709F0 780 aa25.26■■□□□ 1.63
SCAMP4-210ENST00000588555 SNX31Q8N9S9 440 aa25.26■■□□□ 1.63
SCAMP4-210ENST00000588555 C3orf30Q96M34 536 aa25.26■■□□□ 1.63
SCAMP4-210ENST00000588555 SCHIP1Q9P0W5 487 aaPredicted RBP25.26■■□□□ 1.63
SCAMP4-210ENST00000588555 PTGDR2Q9Y5Y4 395 aa25.26■■□□□ 1.63
SCAMP4-210ENST00000588555 DNAH14Q0VDD8 3507 aa25.26■■□□□ 1.63
SCAMP4-210ENST00000588555 OR52A4PA6NMU1 304 aa25.26■■□□□ 1.63
SCAMP4-210ENST00000588555 MEI4A8MW99 385 aa25.26■■□□□ 1.63
SCAMP4-210ENST00000588555 E7ENX8 843 aa25.26■■□□□ 1.63
SCAMP4-210ENST00000588555 PRAMEF4O60810 478 aa25.26■■□□□ 1.63
SCAMP4-210ENST00000588555 EML2O95834 649 aa25.26■■□□□ 1.63
SCAMP4-210ENST00000588555 ENO1P06733 434 aaKnown RBP25.26■■□□□ 1.63
SCAMP4-210ENST00000588555 CD38P28907 300 aa25.26■■□□□ 1.63
SCAMP4-210ENST00000588555 TBPL1P62380 186 aa25.26■■□□□ 1.63
SCAMP4-210ENST00000588555 TAP2Q03519 686 aa25.26■■□□□ 1.63
SCAMP4-210ENST00000588555 CDC16Q13042 620 aa25.26■■□□□ 1.63
SCAMP4-210ENST00000588555 PRKG2Q13237 762 aa25.26■■□□□ 1.63
SCAMP4-210ENST00000588555 PRAMEF9Q5VWM5 478 aa25.26■■□□□ 1.63
SCAMP4-210ENST00000588555 METTL21CQ5VZV1 264 aa25.26■■□□□ 1.63
SCAMP4-210ENST00000588555 CCDC121Q6ZUS5 278 aa25.26■■□□□ 1.63
SCAMP4-210ENST00000588555 SYTL1Q8IYJ3 562 aa25.26■■□□□ 1.63
SCAMP4-210ENST00000588555 GBP7Q8N8V2 638 aaPredicted RBP25.26■■□□□ 1.63
SCAMP4-210ENST00000588555 ACTRT2Q8TDY3 377 aa25.26■■□□□ 1.63
SCAMP4-210ENST00000588555 MED8Q96G25 268 aa25.26■■□□□ 1.63
SCAMP4-210ENST00000588555 SGPP1Q9BX95 441 aa25.26■■□□□ 1.63
SCAMP4-210ENST00000588555 TCEAL2Q9H3H9 227 aaPredicted RBP25.26■■□□□ 1.63
SCAMP4-210ENST00000588555 IMP3Q9NV31 184 aaKnown RBP25.26■■□□□ 1.63
SCAMP4-210ENST00000588555 TRPS1Q9UHF7 1281 aa25.26■■□□□ 1.63
SCAMP4-210ENST00000588555 PLAGL1Q9UM63 463 aa25.26■■□□□ 1.63
SCAMP4-210ENST00000588555 TDRKHQ9Y2W6 561 aaKnown RBP25.26■■□□□ 1.63
SCAMP4-210ENST00000588555 RNF11Q9Y3C5 154 aa25.26■■□□□ 1.63
SCAMP4-210ENST00000588555 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa25.25■■□□□ 1.63
SCAMP4-210ENST00000588555 A6NCN8 305 aa25.25■■□□□ 1.63
SCAMP4-210ENST00000588555 E9PBE3 544 aa25.25■■□□□ 1.63
SCAMP4-210ENST00000588555 MAP3K13O43283 966 aa25.25■■□□□ 1.63
SCAMP4-210ENST00000588555 KLHL41O60662 606 aa25.25■■□□□ 1.63
SCAMP4-210ENST00000588555 CCDC22O60826 627 aa25.25■■□□□ 1.63
SCAMP4-210ENST00000588555 TNFP01375 233 aa25.25■■□□□ 1.63
SCAMP4-210ENST00000588555 ARL1P40616 181 aaPredicted RBP25.25■■□□□ 1.63
SCAMP4-210ENST00000588555 PNLIPRP1P54315 467 aa25.25■■□□□ 1.63
SCAMP4-210ENST00000588555 TCEA2Q15560 299 aa25.25■■□□□ 1.63
SCAMP4-210ENST00000588555 RPE65Q16518 533 aa25.25■■□□□ 1.63
SCAMP4-210ENST00000588555 TJAP1Q5JTD0 557 aa25.25■■□□□ 1.63
SCAMP4-210ENST00000588555 SPDYAQ5MJ70 313 aa25.25■■□□□ 1.63
SCAMP4-210ENST00000588555 TCHHL1Q5QJ38 904 aaPredicted RBP25.25■■□□□ 1.63
SCAMP4-210ENST00000588555 FAM91A1Q658Y4 838 aa25.25■■□□□ 1.63
SCAMP4-210ENST00000588555 IQCHQ86VS3 1027 aa25.25■■□□□ 1.63
SCAMP4-210ENST00000588555 DCP2Q8IU60 420 aaKnown RBP25.25■■□□□ 1.63
SCAMP4-210ENST00000588555 TMEFF1Q8IYR6 380 aa25.25■■□□□ 1.63
SCAMP4-210ENST00000588555 RGL4Q8IZJ4 473 aa25.25■■□□□ 1.63
SCAMP4-210ENST00000588555 CHCHD4Q8N4Q1 142 aa25.25■■□□□ 1.63
SCAMP4-210ENST00000588555 LMNTD1Q8N9Z9 388 aa25.25■■□□□ 1.63
SCAMP4-210ENST00000588555 METTL6Q8TCB7 284 aa25.25■■□□□ 1.63
SCAMP4-210ENST00000588555 GPBAR1Q8TDU6 330 aa25.25■■□□□ 1.63
SCAMP4-210ENST00000588555 IL17FQ96PD4 163 aa25.25■■□□□ 1.63
SCAMP4-210ENST00000588555 DUSP15Q9H1R2 295 aaPredicted RBP25.25■■□□□ 1.63
SCAMP4-210ENST00000588555 BTRCQ9Y297 605 aa25.25■■□□□ 1.63
SCAMP4-210ENST00000588555 ZDBF2Q9HCK1 2354 aa25.24■■□□□ 1.63
SCAMP4-210ENST00000588555 CLDN9O95484 217 aa25.24■■□□□ 1.63
SCAMP4-210ENST00000588555 HGFP14210 728 aa25.24■■□□□ 1.63
SCAMP4-210ENST00000588555 ACTR1BP42025 376 aa25.24■■□□□ 1.63
SCAMP4-210ENST00000588555 HNRNPH2P55795 449 aaKnown RBP25.24■■□□□ 1.63
SCAMP4-210ENST00000588555 ACTR1AP61163 376 aa25.24■■□□□ 1.63
SCAMP4-210ENST00000588555 DMTNQ08495 405 aa25.24■■□□□ 1.63
SCAMP4-210ENST00000588555 FASTKQ14296 549 aaKnown RBP25.24■■□□□ 1.63
SCAMP4-210ENST00000588555 SLC30A9Q6PML9 568 aa25.24■■□□□ 1.63
SCAMP4-210ENST00000588555 LAYNQ6UX15 382 aa25.24■■□□□ 1.63
SCAMP4-210ENST00000588555 EFL1Q7Z2Z2 1120 aaKnown RBP25.24■■□□□ 1.63
SCAMP4-210ENST00000588555 PARGQ86W56 976 aa25.24■■□□□ 1.63
SCAMP4-210ENST00000588555 DNASE2BQ8WZ79 361 aa25.24■■□□□ 1.63
SCAMP4-210ENST00000588555 FERD3LQ96RJ6 166 aa25.24■■□□□ 1.63
SCAMP4-210ENST00000588555 TM9SF3Q9HD45 589 aa25.24■■□□□ 1.63
SCAMP4-210ENST00000588555 SAR1AQ9NR31 198 aa25.24■■□□□ 1.63
SCAMP4-210ENST00000588555 FANCMQ8IYD8 2048 aa25.24■■□□□ 1.63
SCAMP4-210ENST00000588555 FNTBP49356 437 aa25.23■■□□□ 1.63
SCAMP4-210ENST00000588555 PCDH1Q08174 1060 aa25.23■■□□□ 1.63
SCAMP4-210ENST00000588555 ARHGAP19Q14CB8 494 aa25.23■■□□□ 1.63
SCAMP4-210ENST00000588555 GGTA1PQ4G0N0 100 aa25.23■■□□□ 1.63
SCAMP4-210ENST00000588555 CAPN13Q6MZZ7 669 aaPredicted RBP25.23■■□□□ 1.63
SCAMP4-210ENST00000588555 L3MBTL4Q8NA19 623 aa25.23■■□□□ 1.63
SCAMP4-210ENST00000588555 CEP70Q8NHQ1 597 aa25.23■■□□□ 1.63
SCAMP4-210ENST00000588555 NRTNQ99748 197 aa25.23■■□□□ 1.63
SCAMP4-210ENST00000588555 ACTR8Q9H981 624 aa25.23■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms