RNA–Protein interactions for RNA: ENST00000587411.5

RANBP3-209, Transcript of RAN binding protein 3, humanhuman

TSL 1 (best)

Gene RANBP3, Length 2,669 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RANBP3-209ENST00000587411 ESR1P03372 595 aa16.08■□□□□ 0.16
RANBP3-209ENST00000587411 ACVRL1P37023 503 aa16.08■□□□□ 0.16
RANBP3-209ENST00000587411 LIPAP38571 399 aa16.08■□□□□ 0.16
RANBP3-209ENST00000587411 COPZ1P61923 177 aa16.08■□□□□ 0.16
RANBP3-209ENST00000587411 ELP6Q0PNE2 266 aa16.08■□□□□ 0.16
RANBP3-209ENST00000587411 TBCEQ15813 527 aaPredicted RBP16.08■□□□□ 0.16
RANBP3-209ENST00000587411 DDX59Q5T1V6 619 aaKnown RBP eCLIP16.08■□□□□ 0.16
RANBP3-209ENST00000587411 CCBE1Q6UXH8 406 aaPredicted RBP16.08■□□□□ 0.16
RANBP3-209ENST00000587411 DEFB132Q7Z7B7 95 aa16.08■□□□□ 0.16
RANBP3-209ENST00000587411 METTL4Q8N3J2 472 aa16.08■□□□□ 0.16
RANBP3-209ENST00000587411 PARP16Q8N5Y8 322 aa16.08■□□□□ 0.16
RANBP3-209ENST00000587411 KRT84Q9NSB2 600 aa16.08■□□□□ 0.16
RANBP3-209ENST00000587411 KIF17Q9P2E2 1029 aa16.08■□□□□ 0.16
RANBP3-209ENST00000587411 RAPGEFL1Q9UHV5 662 aa16.08■□□□□ 0.16
RANBP3-209ENST00000587411 SCML2Q9UQR0 700 aa16.08■□□□□ 0.16
RANBP3-209ENST00000587411 ANKRD12Q6UB98 2062 aa16.08■□□□□ 0.16
RANBP3-209ENST00000587411 GBF1Q92538 1859 aa16.08■□□□□ 0.16
RANBP3-209ENST00000587411 MYO1GB0I1T2 1018 aa16.08■□□□□ 0.16
RANBP3-209ENST00000587411 M0QZQ0 153 aa16.08■□□□□ 0.16
RANBP3-209ENST00000587411 IDH3BO43837 385 aa16.08■□□□□ 0.16
RANBP3-209ENST00000587411 OR1I1O60431 355 aa16.08■□□□□ 0.16
RANBP3-209ENST00000587411 PAX3P23760 479 aa16.08■□□□□ 0.16
RANBP3-209ENST00000587411 HOXA9P31269 272 aa16.08■□□□□ 0.16
RANBP3-209ENST00000587411 BRCC3P46736 316 aa16.08■□□□□ 0.16
RANBP3-209ENST00000587411 CDKN1CP49918 316 aaPredicted RBP16.08■□□□□ 0.16
RANBP3-209ENST00000587411 AGAP6Q5VW22 663 aa16.08■□□□□ 0.16
RANBP3-209ENST00000587411 PSAPL1Q6NUJ1 521 aa16.08■□□□□ 0.16
RANBP3-209ENST00000587411 TRIM46Q7Z4K8 759 aa16.08■□□□□ 0.16
RANBP3-209ENST00000587411 PIANPQ8IYJ0 282 aa16.08■□□□□ 0.16
RANBP3-209ENST00000587411 LPPQ93052 612 aa16.08■□□□□ 0.16
RANBP3-209ENST00000587411 RMDN1Q96DB5 314 aa16.08■□□□□ 0.16
RANBP3-209ENST00000587411 AGAP4Q96P64 663 aa16.08■□□□□ 0.16
RANBP3-209ENST00000587411 MGME1Q9BQP7 344 aa16.08■□□□□ 0.16
RANBP3-209ENST00000587411 LRTM1Q9HBL6 345 aa16.08■□□□□ 0.16
RANBP3-209ENST00000587411 ZMYM5Q9UJ78 669 aa16.08■□□□□ 0.16
RANBP3-209ENST00000587411 MKLN1Q9UL63 735 aa16.08■□□□□ 0.16
RANBP3-209ENST00000587411 ABCG2Q9UNQ0 655 aa16.08■□□□□ 0.16
RANBP3-209ENST00000587411 ARIH1Q9Y4X5 557 aaPredicted RBP16.08■□□□□ 0.16
RANBP3-209ENST00000587411 PEX16Q9Y5Y5 336 aa16.08■□□□□ 0.16
RANBP3-209ENST00000587411 PNMA8CA0A1B0GUJ8 204 aa16.07■□□□□ 0.16
RANBP3-209ENST00000587411 GOLGA8CPA6NN73 597 aa16.07■□□□□ 0.16
RANBP3-209ENST00000587411 WBP4O75554 376 aaKnown RBP16.07■□□□□ 0.16
RANBP3-209ENST00000587411 PGLSO95336 258 aa16.07■□□□□ 0.16
RANBP3-209ENST00000587411 ZNF682O95780 498 aa16.07■□□□□ 0.16
RANBP3-209ENST00000587411 LPOP22079 712 aaPredicted RBP16.07■□□□□ 0.16
RANBP3-209ENST00000587411 OR1E1P30953 314 aa16.07■□□□□ 0.16
RANBP3-209ENST00000587411 DDR2Q16832 855 aa16.07■□□□□ 0.16
RANBP3-209ENST00000587411 SYT16Q17RD7 645 aa16.07■□□□□ 0.16
RANBP3-209ENST00000587411 RAP1GAP2Q684P5 730 aa16.07■□□□□ 0.16
RANBP3-209ENST00000587411 HEATR4Q86WZ0 1026 aa16.07■□□□□ 0.16
RANBP3-209ENST00000587411 HORMAD1Q86X24 394 aa16.07■□□□□ 0.16
RANBP3-209ENST00000587411 GPC2Q8N158 579 aa16.07■□□□□ 0.16
RANBP3-209ENST00000587411 KRTCAP2Q8N6L1 136 aa16.07■□□□□ 0.16
RANBP3-209ENST00000587411 CCDC97Q96F63 343 aaPredicted RBP16.07■□□□□ 0.16
RANBP3-209ENST00000587411 RPRD1AQ96P16 312 aaPredicted RBP16.07■□□□□ 0.16
RANBP3-209ENST00000587411 TINF2Q9BSI4 451 aa16.07■□□□□ 0.16
RANBP3-209ENST00000587411 EMILIN2Q9BXX0 1053 aa16.07■□□□□ 0.16
RANBP3-209ENST00000587411 PDFQ9HBH1 243 aa16.07■□□□□ 0.16
RANBP3-209ENST00000587411 MTPAPQ9NVV4 582 aaKnown RBP eCLIP16.07■□□□□ 0.16
RANBP3-209ENST00000587411 PDP1Q9P0J1 537 aaPredicted RBP16.07■□□□□ 0.16
RANBP3-209ENST00000587411 HAS3O00219 553 aa16.07■□□□□ 0.16
RANBP3-209ENST00000587411 CA12O43570 354 aa16.07■□□□□ 0.16
RANBP3-209ENST00000587411 DBTP11182 482 aaKnown RBP16.07■□□□□ 0.16
RANBP3-209ENST00000587411 ALOX12P18054 663 aa16.07■□□□□ 0.16
RANBP3-209ENST00000587411 MC4RP32245 332 aa16.07■□□□□ 0.16
RANBP3-209ENST00000587411 PTGER3P43115 390 aa16.07■□□□□ 0.16
RANBP3-209ENST00000587411 LAPTM4AQ15012 233 aa16.07■□□□□ 0.16
RANBP3-209ENST00000587411 C18orf21Q32NC0 220 aaPredicted RBP16.07■□□□□ 0.16
RANBP3-209ENST00000587411 TTLL9Q3SXZ7 439 aa16.07■□□□□ 0.16
RANBP3-209ENST00000587411 TAS2R42Q7RTR8 314 aa16.07■□□□□ 0.16
RANBP3-209ENST00000587411 MDGA1Q8NFP4 955 aa16.07■□□□□ 0.16
RANBP3-209ENST00000587411 COPS4Q9BT78 406 aa16.07■□□□□ 0.16
RANBP3-209ENST00000587411 ZFP14Q9HCL3 533 aa16.07■□□□□ 0.16
RANBP3-209ENST00000587411 SARS2Q9NP81 518 aaKnown RBP16.07■□□□□ 0.16
RANBP3-209ENST00000587411 RASSF1Q9NS23 344 aa16.07■□□□□ 0.16
RANBP3-209ENST00000587411 SLC6A13Q9NSD5 602 aa16.07■□□□□ 0.16
RANBP3-209ENST00000587411 ZNF221Q9UK13 617 aa16.07■□□□□ 0.16
RANBP3-209ENST00000587411 GPR182O15218 404 aa16.06■□□□□ 0.16
RANBP3-209ENST00000587411 FFAR2O15552 330 aa16.06■□□□□ 0.16
RANBP3-209ENST00000587411 GLUD1P00367 558 aa16.06■□□□□ 0.16
RANBP3-209ENST00000587411 RPLP0P05388 317 aaKnown RBP16.06■□□□□ 0.16
RANBP3-209ENST00000587411 FABP3P05413 133 aa16.06■□□□□ 0.16
RANBP3-209ENST00000587411 GADD45AP24522 165 aa16.06■□□□□ 0.16
RANBP3-209ENST00000587411 GTF2E2P29084 291 aaKnown RBP16.06■□□□□ 0.16
RANBP3-209ENST00000587411 TIGD6Q17RP2 521 aa16.06■□□□□ 0.16
RANBP3-209ENST00000587411 PAN2Q504Q3 1202 aaKnown RBP16.06■□□□□ 0.16
RANBP3-209ENST00000587411 ZNF544Q6NX49 715 aa16.06■□□□□ 0.16
RANBP3-209ENST00000587411 SBSNQ6UWP8 590 aa16.06■□□□□ 0.16
RANBP3-209ENST00000587411 GDPD3Q7L5L3 318 aa16.06■□□□□ 0.16
RANBP3-209ENST00000587411 SYTL1Q8IYJ3 562 aa16.06■□□□□ 0.16
RANBP3-209ENST00000587411 PGBD3Q8N328 593 aa16.06■□□□□ 0.16
RANBP3-209ENST00000587411 ATG16L2Q8NAA4 619 aa16.06■□□□□ 0.16
RANBP3-209ENST00000587411 IL17RDQ8NFM7 739 aa16.06■□□□□ 0.16
RANBP3-209ENST00000587411 MYDGFQ969H8 173 aa16.06■□□□□ 0.16
RANBP3-209ENST00000587411 SNX18Q96RF0 628 aa16.06■□□□□ 0.16
RANBP3-209ENST00000587411 CDADC1Q9BWV3 514 aa16.06■□□□□ 0.16
RANBP3-209ENST00000587411 CCDC177Q9NQR7 707 aaPredicted RBP16.06■□□□□ 0.16
RANBP3-209ENST00000587411 RPS6KA6Q9UK32 745 aa16.06■□□□□ 0.16
RANBP3-209ENST00000587411 DHRS7Q9Y394 339 aa16.06■□□□□ 0.16
RANBP3-209ENST00000587411 C17orf102A2RUQ5 167 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms