RNA–Protein interactions for RNA: ENST00000586638.5

APOC1-201, Transcript of apolipoprotein C1, humanhuman

TSL 3 BASIC

Gene APOC1, Length 425 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-201ENST00000586638 POM121BA6NF01 834 aa9.9□□□□□ -0.82
APOC1-201ENST00000586638 LRRC72A6NJI9 287 aa9.9□□□□□ -0.82
APOC1-201ENST00000586638 LATO43561 262 aa9.9□□□□□ -0.82
APOC1-201ENST00000586638 KATNA1O75449 491 aa9.9□□□□□ -0.82
APOC1-201ENST00000586638 STK16O75716 305 aa9.9□□□□□ -0.82
APOC1-201ENST00000586638 ATP6AP2O75787 350 aa9.9□□□□□ -0.82
APOC1-201ENST00000586638 FSBPO95073 299 aa9.9□□□□□ -0.82
APOC1-201ENST00000586638 C1orf105O95561 183 aa9.9□□□□□ -0.82
APOC1-201ENST00000586638 SEMA4FO95754 770 aa9.9□□□□□ -0.82
APOC1-201ENST00000586638 HIST1H2AGP0C0S8 130 aaPredicted RBP9.9□□□□□ -0.82
APOC1-201ENST00000586638 UROSP10746 265 aa9.9□□□□□ -0.82
APOC1-201ENST00000586638 ACP5P13686 325 aa9.9□□□□□ -0.82
APOC1-201ENST00000586638 HIST1H2ADP20671 130 aa9.9□□□□□ -0.82
APOC1-201ENST00000586638 MAP4P27816 1152 aaKnown RBP9.9□□□□□ -0.82
APOC1-201ENST00000586638 HMOX2P30519 316 aa9.9□□□□□ -0.82
APOC1-201ENST00000586638 NOVA1P51513 510 aaKnown RBP9.9□□□□□ -0.82
APOC1-201ENST00000586638 AP1S2P56377 157 aa9.9□□□□□ -0.82
APOC1-201ENST00000586638 KIAA1024LP59773 190 aa9.9□□□□□ -0.82
APOC1-201ENST00000586638 SFSWAPQ12872 951 aaKnown RBP9.9□□□□□ -0.82
APOC1-201ENST00000586638 ZXDCQ2QGD7 858 aaPredicted RBP9.9□□□□□ -0.82
APOC1-201ENST00000586638 PTCHD3Q3KNS1 767 aa9.9□□□□□ -0.82
APOC1-201ENST00000586638 MAP7D1Q3KQU3 841 aa9.9□□□□□ -0.82
APOC1-201ENST00000586638 CDKL4Q5MAI5 379 aa9.9□□□□□ -0.82
APOC1-201ENST00000586638 TPRG1LQ5T0D9 272 aa9.9□□□□□ -0.82
APOC1-201ENST00000586638 TCEAL6Q6IPX3 200 aa9.9□□□□□ -0.82
APOC1-201ENST00000586638 DUS1LQ6P1R4 473 aaKnown RBP9.9□□□□□ -0.82
APOC1-201ENST00000586638 NEK5Q6P3R8 708 aa9.9□□□□□ -0.82
APOC1-201ENST00000586638 GCNT7Q6ZNI0 430 aa9.9□□□□□ -0.82
APOC1-201ENST00000586638 SYT13Q7L8C5 426 aa9.9□□□□□ -0.82
APOC1-201ENST00000586638 PDZD3Q86UT5 571 aa9.9□□□□□ -0.82
APOC1-201ENST00000586638 POU5F2Q8N7G0 328 aa9.9□□□□□ -0.82
APOC1-201ENST00000586638 PPFIBP2Q8ND30 876 aa9.9□□□□□ -0.82
APOC1-201ENST00000586638 DENND6BQ8NEG7 585 aa9.9□□□□□ -0.82
APOC1-201ENST00000586638 TSTD1Q8NFU3 115 aa9.9□□□□□ -0.82
APOC1-201ENST00000586638 OR4F6Q8NGB9 312 aa9.9□□□□□ -0.82
APOC1-201ENST00000586638 MCOLN3Q8TDD5 553 aa9.9□□□□□ -0.82
APOC1-201ENST00000586638 ACTRT2Q8TDY3 377 aa9.9□□□□□ -0.82
APOC1-201ENST00000586638 TCEAL3Q969E4 200 aa9.9□□□□□ -0.82
APOC1-201ENST00000586638 PYCR2Q96C36 320 aa9.9□□□□□ -0.82
APOC1-201ENST00000586638 NSL1Q96IY1 281 aa9.9□□□□□ -0.82
APOC1-201ENST00000586638 HIST1H2AHQ96KK5 128 aa9.9□□□□□ -0.82
APOC1-201ENST00000586638 FOPNLQ96NB1 174 aa9.9□□□□□ -0.82
APOC1-201ENST00000586638 PKP4Q99569 1192 aa9.9□□□□□ -0.82
APOC1-201ENST00000586638 HIST1H2AJQ99878 128 aa9.9□□□□□ -0.82
APOC1-201ENST00000586638 H2AFJQ9BTM1 129 aa9.9□□□□□ -0.82
APOC1-201ENST00000586638 APOOQ9BUR5 198 aa9.9□□□□□ -0.82
APOC1-201ENST00000586638 EDEM2Q9BV94 578 aa9.9□□□□□ -0.82
APOC1-201ENST00000586638 TPSD1Q9BZJ3 242 aa9.9□□□□□ -0.82
APOC1-201ENST00000586638 ATG10Q9H0Y0 220 aa9.9□□□□□ -0.82
APOC1-201ENST00000586638 OR52A5Q9H2C5 316 aa9.9□□□□□ -0.82
APOC1-201ENST00000586638 C6orf106Q9H6K1 298 aaPredicted RBP9.9□□□□□ -0.82
APOC1-201ENST00000586638 IPPKQ9H8X2 491 aa9.9□□□□□ -0.82
APOC1-201ENST00000586638 MRPL40Q9NQ50 206 aaKnown RBP9.9□□□□□ -0.82
APOC1-201ENST00000586638 DNAJC11Q9NVH1 559 aa9.9□□□□□ -0.82
APOC1-201ENST00000586638 STOX2Q9P2F5 926 aaPredicted RBP9.9□□□□□ -0.82
APOC1-201ENST00000586638 POLG2Q9UHN1 485 aa9.9□□□□□ -0.82
APOC1-201ENST00000586638 ZNHIT2Q9UHR6 403 aa9.9□□□□□ -0.82
APOC1-201ENST00000586638 TAGLN3Q9UI15 199 aa9.9□□□□□ -0.82
APOC1-201ENST00000586638 PSMD13Q9UNM6 376 aa9.9□□□□□ -0.82
APOC1-201ENST00000586638 STK38LQ9Y2H1 464 aa9.9□□□□□ -0.82
APOC1-201ENST00000586638 PLEKHM1Q9Y4G2 1056 aa9.9□□□□□ -0.82
APOC1-201ENST00000586638 COPG1Q9Y678 874 aaKnown RBP9.9□□□□□ -0.82
APOC1-201ENST00000586638 GCN1Q92616 2671 aaKnown RBP9.9□□□□□ -0.82
APOC1-201ENST00000586638 TP53BP1Q12888 1972 aaPredicted RBP9.9□□□□□ -0.83
APOC1-201ENST00000586638 ZZEF1O43149 2961 aa9.89□□□□□ -0.83
APOC1-201ENST00000586638 ASH1LQ9NR48 2969 aaKnown RBP9.89□□□□□ -0.83
APOC1-201ENST00000586638 EML5Q05BV3 1969 aa9.89□□□□□ -0.83
APOC1-201ENST00000586638 C17orf113A0A1B0GUU1 675 aa9.89□□□□□ -0.83
APOC1-201ENST00000586638 C1QTNF9BB2RNN3 333 aa9.89□□□□□ -0.83
APOC1-201ENST00000586638 H0Y8X5 98 aa9.89□□□□□ -0.83
APOC1-201ENST00000586638 CACNB4O00305 520 aaPredicted RBP9.89□□□□□ -0.83
APOC1-201ENST00000586638 FFAR3O14843 346 aa9.89□□□□□ -0.83
APOC1-201ENST00000586638 KMOO15229 486 aa9.89□□□□□ -0.83
APOC1-201ENST00000586638 GPR42O15529 346 aa9.89□□□□□ -0.83
APOC1-201ENST00000586638 APBB3O95704 486 aa9.89□□□□□ -0.83
APOC1-201ENST00000586638 OTCP00480 354 aa9.89□□□□□ -0.83
APOC1-201ENST00000586638 FUCA1P04066 466 aa9.89□□□□□ -0.83
APOC1-201ENST00000586638 CEACAM5P06731 702 aa9.89□□□□□ -0.83
APOC1-201ENST00000586638 CAPN1P07384 714 aa9.89□□□□□ -0.83
APOC1-201ENST00000586638 FGF4P08620 206 aa9.89□□□□□ -0.83
APOC1-201ENST00000586638 LINC00032P0C843 101 aa9.89□□□□□ -0.83
APOC1-201ENST00000586638 C1QTNF9P0C862 333 aa9.89□□□□□ -0.83
APOC1-201ENST00000586638 ESRRAP11474 423 aaPredicted RBP9.89□□□□□ -0.83
APOC1-201ENST00000586638 EPORP19235 508 aa9.89□□□□□ -0.83
APOC1-201ENST00000586638 HNRNPA2B1P22626 353 aaKnown RBP9.89□□□□□ -0.83
APOC1-201ENST00000586638 PIK3R1P27986 724 aa9.89□□□□□ -0.83
APOC1-201ENST00000586638 IMPA1P29218 277 aa9.89□□□□□ -0.83
APOC1-201ENST00000586638 PIK3CGP48736 1102 aa9.89□□□□□ -0.83
APOC1-201ENST00000586638 DGKEP52429 567 aa9.89□□□□□ -0.83
APOC1-201ENST00000586638 KCNJ2P63252 427 aa9.89□□□□□ -0.83
APOC1-201ENST00000586638 KLF10Q13118 480 aa9.89□□□□□ -0.83
APOC1-201ENST00000586638 NAA25Q14CX7 972 aa9.89□□□□□ -0.83
APOC1-201ENST00000586638 TCEA2Q15560 299 aa9.89□□□□□ -0.83
APOC1-201ENST00000586638 TBCCQ15814 346 aa9.89□□□□□ -0.83
APOC1-201ENST00000586638 UNQ6494/PRO21346Q6UXR6 183 aa9.89□□□□□ -0.83
APOC1-201ENST00000586638 RINLQ6ZS11 566 aa9.89□□□□□ -0.83
APOC1-201ENST00000586638 GK5Q6ZS86 529 aa9.89□□□□□ -0.83
APOC1-201ENST00000586638 EFL1Q7Z2Z2 1120 aaKnown RBP9.89□□□□□ -0.83
APOC1-201ENST00000586638 AMZ2Q86W34 360 aa9.89□□□□□ -0.83
APOC1-201ENST00000586638 GALNT13Q8IUC8 556 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms