RNA–Protein interactions for RNA: ENST00000583363.5

CDK5RAP3-228, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 558 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-228ENST00000583363 GPR156Q8NFN8 814 aa15.88■□□□□ 0.13
CDK5RAP3-228ENST00000583363 OR2I1PQ8NGU4 316 aa15.88■□□□□ 0.13
CDK5RAP3-228ENST00000583363 MAPK15Q8TD08 544 aa15.88■□□□□ 0.13
CDK5RAP3-228ENST00000583363 SLC37A2Q8TED4 501 aa15.88■□□□□ 0.13
CDK5RAP3-228ENST00000583363 FBXL8Q96CD0 374 aa15.88■□□□□ 0.13
CDK5RAP3-228ENST00000583363 PHF21BQ96EK2 531 aa15.88■□□□□ 0.13
CDK5RAP3-228ENST00000583363 EGFL8Q99944 293 aa15.88■□□□□ 0.13
CDK5RAP3-228ENST00000583363 MECRQ9BV79 373 aa15.88■□□□□ 0.13
CDK5RAP3-228ENST00000583363 GTPBP2Q9BX10 602 aaKnown RBP15.88■□□□□ 0.13
CDK5RAP3-228ENST00000583363 KIR3DX1Q9H7L2 352 aa15.88■□□□□ 0.13
CDK5RAP3-228ENST00000583363 SLC40A1Q9NP59 571 aa15.88■□□□□ 0.13
CDK5RAP3-228ENST00000583363 OGFRQ9NZT2 677 aa15.88■□□□□ 0.13
CDK5RAP3-228ENST00000583363 SIRPGQ9P1W8 387 aa15.88■□□□□ 0.13
CDK5RAP3-228ENST00000583363 TDRKHQ9Y2W6 561 aaKnown RBP15.88■□□□□ 0.13
CDK5RAP3-228ENST00000583363 KRT87PA6NCN2 255 aa15.87■□□□□ 0.13
CDK5RAP3-228ENST00000583363 B4DGG1 531 aa15.87■□□□□ 0.13
CDK5RAP3-228ENST00000583363 ZZEF1O43149 2961 aa15.87■□□□□ 0.13
CDK5RAP3-228ENST00000583363 PCDHGA12O60330 932 aa15.87■□□□□ 0.13
CDK5RAP3-228ENST00000583363 ZNF883P0CG24 379 aa15.87■□□□□ 0.13
CDK5RAP3-228ENST00000583363 IMPDH1P20839 514 aa15.87■□□□□ 0.13
CDK5RAP3-228ENST00000583363 HSD17B2P37059 387 aa15.87■□□□□ 0.13
CDK5RAP3-228ENST00000583363 SETDB1Q15047 1291 aa15.87■□□□□ 0.13
CDK5RAP3-228ENST00000583363 C18orf21Q32NC0 220 aaPredicted RBP15.87■□□□□ 0.13
CDK5RAP3-228ENST00000583363 C6orf132Q5T0Z8 1188 aa15.87■□□□□ 0.13
CDK5RAP3-228ENST00000583363 LIPMQ5VYY2 423 aa15.87■□□□□ 0.13
CDK5RAP3-228ENST00000583363 MTERF4Q7Z6M4 381 aaKnown RBP15.87■□□□□ 0.13
CDK5RAP3-228ENST00000583363 TRIM48Q8IWZ4 208 aa15.87■□□□□ 0.13
CDK5RAP3-228ENST00000583363 MINDY1Q8N5J2 469 aa15.87■□□□□ 0.13
CDK5RAP3-228ENST00000583363 OR6Y1Q8NGX8 325 aa15.87■□□□□ 0.13
CDK5RAP3-228ENST00000583363 ATL1Q8WXF7 558 aa15.87■□□□□ 0.13
CDK5RAP3-228ENST00000583363 HGH1Q9BTY7 390 aa15.87■□□□□ 0.13
CDK5RAP3-228ENST00000583363 MENTQ9BUN1 341 aa15.87■□□□□ 0.13
CDK5RAP3-228ENST00000583363 DUSP23Q9BVJ7 150 aa15.87■□□□□ 0.13
CDK5RAP3-228ENST00000583363 POT1Q9NUX5 634 aa15.87■□□□□ 0.13
CDK5RAP3-228ENST00000583363 NLGN3Q9NZ94 848 aa15.87■□□□□ 0.13
CDK5RAP3-228ENST00000583363 NCKIPSDQ9NZQ3 722 aa15.87■□□□□ 0.13
CDK5RAP3-228ENST00000583363 STOX2Q9P2F5 926 aaPredicted RBP15.87■□□□□ 0.13
CDK5RAP3-228ENST00000583363 CIDEBQ9UHD4 219 aa15.87■□□□□ 0.13
CDK5RAP3-228ENST00000583363 LNPEPQ9UIQ6 1025 aa15.87■□□□□ 0.13
CDK5RAP3-228ENST00000583363 WASF3Q9UPY6 502 aa15.87■□□□□ 0.13
CDK5RAP3-228ENST00000583363 FAM208BQ5VWN6 2430 aa15.86■□□□□ 0.13
CDK5RAP3-228ENST00000583363 ASPMQ8IZT6 3477 aa15.86■□□□□ 0.13
CDK5RAP3-228ENST00000583363 POLR3GO15318 223 aaPredicted RBP15.86■□□□□ 0.13
CDK5RAP3-228ENST00000583363 SLC16A8O95907 504 aa15.86■□□□□ 0.13
CDK5RAP3-228ENST00000583363 FGF3P11487 239 aaPredicted RBP15.86■□□□□ 0.13
CDK5RAP3-228ENST00000583363 IMPA1P29218 277 aa15.86■□□□□ 0.13
CDK5RAP3-228ENST00000583363 MDH1P40925 334 aaKnown RBP15.86■□□□□ 0.13
CDK5RAP3-228ENST00000583363 AGTR2P50052 363 aa15.86■□□□□ 0.13
CDK5RAP3-228ENST00000583363 ATXN3P54252 364 aaPredicted RBP15.86■□□□□ 0.13
CDK5RAP3-228ENST00000583363 ARHGAP19Q14CB8 494 aa15.86■□□□□ 0.13
CDK5RAP3-228ENST00000583363 PCBP2Q15366 365 aaKnown RBP eCLIP15.86■□□□□ 0.13
CDK5RAP3-228ENST00000583363 CYP2A13Q16696 494 aa15.86■□□□□ 0.13
CDK5RAP3-228ENST00000583363 CHCHD2P9Q5T1J5 151 aaPredicted RBP15.86■□□□□ 0.13
CDK5RAP3-228ENST00000583363 AGTRAPQ6RW13 159 aa15.86■□□□□ 0.13
CDK5RAP3-228ENST00000583363 UNQ6494/PRO21346Q6UXR6 183 aa15.86■□□□□ 0.13
CDK5RAP3-228ENST00000583363 RAB44Q7Z6P3 723 aaPredicted RBP15.86■□□□□ 0.13
CDK5RAP3-228ENST00000583363 RBM12BQ8IXT5 1001 aaKnown RBP15.86■□□□□ 0.13
CDK5RAP3-228ENST00000583363 LRRC56Q8IYG6 542 aaPredicted RBP15.86■□□□□ 0.13
CDK5RAP3-228ENST00000583363 AVL9Q8NBF6 648 aa15.86■□□□□ 0.13
CDK5RAP3-228ENST00000583363 OR52E1Q8NGJ3 308 aa15.86■□□□□ 0.13
CDK5RAP3-228ENST00000583363 ZNF480Q8WV37 535 aa15.86■□□□□ 0.13
CDK5RAP3-228ENST00000583363 CKAP2Q8WWK9 683 aa15.86■□□□□ 0.13
CDK5RAP3-228ENST00000583363 L3HYPDHQ96EM0 354 aa15.86■□□□□ 0.13
CDK5RAP3-228ENST00000583363 GATA5Q9BWX5 397 aaPredicted RBP15.86■□□□□ 0.13
CDK5RAP3-228ENST00000583363 C1QTNF3Q9BXJ4 246 aa15.86■□□□□ 0.13
CDK5RAP3-228ENST00000583363 DNAAF2Q9NVR5 837 aaKnown RBP15.86■□□□□ 0.13
CDK5RAP3-228ENST00000583363 SPATA7Q9P0W8 599 aa15.86■□□□□ 0.13
CDK5RAP3-228ENST00000583363 PLAGL1Q9UM63 463 aa15.86■□□□□ 0.13
CDK5RAP3-228ENST00000583363 TNPO3Q9Y5L0 923 aaKnown RBP15.86■□□□□ 0.13
CDK5RAP3-228ENST00000583363 ARID1BQ8NFD5 2236 aaPredicted RBP15.86■□□□□ 0.13
CDK5RAP3-228ENST00000583363 SPEGQ15772 3267 aa15.85■□□□□ 0.13
CDK5RAP3-228ENST00000583363 TRIM38O00635 465 aa15.85■□□□□ 0.13
CDK5RAP3-228ENST00000583363 CDX4O14627 284 aaPredicted RBP15.85■□□□□ 0.13
CDK5RAP3-228ENST00000583363 PPM1DO15297 605 aa15.85■□□□□ 0.13
CDK5RAP3-228ENST00000583363 KDM1AO60341 852 aa15.85■□□□□ 0.13
CDK5RAP3-228ENST00000583363 SIX3O95343 332 aaPredicted RBP15.85■□□□□ 0.13
CDK5RAP3-228ENST00000583363 ERGP11308 486 aa15.85■□□□□ 0.13
CDK5RAP3-228ENST00000583363 SPINK2P20155 84 aa15.85■□□□□ 0.13
CDK5RAP3-228ENST00000583363 BGNP21810 368 aa15.85■□□□□ 0.13
CDK5RAP3-228ENST00000583363 FASLGP48023 281 aa15.85■□□□□ 0.13
CDK5RAP3-228ENST00000583363 SLC6A12P48065 614 aa15.85■□□□□ 0.13
CDK5RAP3-228ENST00000583363 PNLIPRP1P54315 467 aa15.85■□□□□ 0.13
CDK5RAP3-228ENST00000583363 NAGLUP54802 743 aa15.85■□□□□ 0.13
CDK5RAP3-228ENST00000583363 GYS2P54840 703 aa15.85■□□□□ 0.13
CDK5RAP3-228ENST00000583363 MAZP56270 477 aaKnown RBP15.85■□□□□ 0.13
CDK5RAP3-228ENST00000583363 HERVK_113P63132 956 aa15.85■□□□□ 0.13
CDK5RAP3-228ENST00000583363 ASPHQ12797 758 aa15.85■□□□□ 0.13
CDK5RAP3-228ENST00000583363 FOXC1Q12948 553 aa15.85■□□□□ 0.13
CDK5RAP3-228ENST00000583363 CHI3L2Q15782 390 aa15.85■□□□□ 0.13
CDK5RAP3-228ENST00000583363 C14orf28Q4W4Y0 310 aa15.85■□□□□ 0.13
CDK5RAP3-228ENST00000583363 UNC50Q53HI1 259 aa15.85■□□□□ 0.13
CDK5RAP3-228ENST00000583363 FBXO48Q5FWF7 155 aa15.85■□□□□ 0.13
CDK5RAP3-228ENST00000583363 ZNF678Q5SXM1 525 aa15.85■□□□□ 0.13
CDK5RAP3-228ENST00000583363 METTL2BQ6P1Q9 378 aaKnown RBP15.85■□□□□ 0.13
CDK5RAP3-228ENST00000583363 DBX2Q6ZNG2 339 aa15.85■□□□□ 0.13
CDK5RAP3-228ENST00000583363 TAX1BP1Q86VP1 789 aa15.85■□□□□ 0.13
CDK5RAP3-228ENST00000583363 TRIM42Q8IWZ5 723 aa15.85■□□□□ 0.13
CDK5RAP3-228ENST00000583363 KLHDC8AQ8IYD2 350 aa15.85■□□□□ 0.13
CDK5RAP3-228ENST00000583363 OR56A3Q8NH54 315 aa15.85■□□□□ 0.13
CDK5RAP3-228ENST00000583363 OR4C6Q8NH72 309 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms