RNA–Protein interactions for RNA: ENST00000580541.1

SKA2-205, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 3 BASIC

Gene SKA2, Length 689 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-205ENST00000580541 TCP10LQ8TDR4 215 aa13.86□□□□□ -0.19
SKA2-205ENST00000580541 SMPDL3AQ92484 453 aa13.86□□□□□ -0.19
SKA2-205ENST00000580541 DLG3Q92796 817 aa13.86□□□□□ -0.19
SKA2-205ENST00000580541 ATOH8Q96SQ7 321 aa13.86□□□□□ -0.19
SKA2-205ENST00000580541 CAPS2Q9BXY5 557 aa13.86□□□□□ -0.19
SKA2-205ENST00000580541 UNKQ9C0B0 810 aaKnown RBP13.86□□□□□ -0.19
SKA2-205ENST00000580541 XPR1Q9UBH6 696 aa13.86□□□□□ -0.19
SKA2-205ENST00000580541 BTBD3Q9Y2F9 522 aa13.86□□□□□ -0.19
SKA2-205ENST00000580541 PCM1Q15154 2024 aa13.86□□□□□ -0.19
SKA2-205ENST00000580541 PCNX2A6NKB5 2137 aa13.85□□□□□ -0.19
SKA2-205ENST00000580541 COL5A1P20908 1838 aaPredicted RBP13.85□□□□□ -0.19
SKA2-205ENST00000580541 FOXO6A8MYZ6 492 aa13.85□□□□□ -0.19
SKA2-205ENST00000580541 MAP3K7O43318 606 aa13.85□□□□□ -0.19
SKA2-205ENST00000580541 TYROBPO43914 113 aa13.85□□□□□ -0.19
SKA2-205ENST00000580541 FKBP9O95302 570 aa13.85□□□□□ -0.19
SKA2-205ENST00000580541 SLC16A8O95907 504 aa13.85□□□□□ -0.19
SKA2-205ENST00000580541 PROS1P07225 676 aa13.85□□□□□ -0.19
SKA2-205ENST00000580541 MYL2P10916 166 aa13.85□□□□□ -0.19
SKA2-205ENST00000580541 CPA3P15088 417 aa13.85□□□□□ -0.19
SKA2-205ENST00000580541 CSRP1P21291 193 aaKnown RBP13.85□□□□□ -0.19
SKA2-205ENST00000580541 ATP5F1P24539 256 aaPredicted RBP13.85□□□□□ -0.19
SKA2-205ENST00000580541 PRKAA2P54646 552 aa13.85□□□□□ -0.19
SKA2-205ENST00000580541 SQSTM1Q13501 440 aa13.85□□□□□ -0.19
SKA2-205ENST00000580541 KIR2DS3Q14952 304 aa13.85□□□□□ -0.19
SKA2-205ENST00000580541 NAA25Q14CX7 972 aa13.85□□□□□ -0.19
SKA2-205ENST00000580541 PHKG1Q16816 387 aa13.85□□□□□ -0.19
SKA2-205ENST00000580541 EEF1AKMT2Q5JPI9 291 aaKnown RBP13.85□□□□□ -0.19
SKA2-205ENST00000580541 CAPN13Q6MZZ7 669 aaPredicted RBP13.85□□□□□ -0.19
SKA2-205ENST00000580541 AGTRAPQ6RW13 159 aa13.85□□□□□ -0.19
SKA2-205ENST00000580541 PIP4P1Q86T03 277 aa13.85□□□□□ -0.19
SKA2-205ENST00000580541 PLXDC1Q8IUK5 500 aa13.85□□□□□ -0.19
SKA2-205ENST00000580541 FBXO39Q8N4B4 442 aa13.85□□□□□ -0.19
SKA2-205ENST00000580541 PDPRQ8NCN5 879 aa13.85□□□□□ -0.19
SKA2-205ENST00000580541 IFI44Q8TCB0 444 aa13.85□□□□□ -0.19
SKA2-205ENST00000580541 CCDC74AQ96AQ1 378 aa13.85□□□□□ -0.19
SKA2-205ENST00000580541 ARL8AQ96BM9 186 aa13.85□□□□□ -0.19
SKA2-205ENST00000580541 ZDHHC12Q96GR4 267 aa13.85□□□□□ -0.19
SKA2-205ENST00000580541 MIPEPQ99797 713 aa13.85□□□□□ -0.19
SKA2-205ENST00000580541 RAB33BQ9H082 229 aa13.85□□□□□ -0.19
SKA2-205ENST00000580541 ZNF358Q9NW07 568 aa13.85□□□□□ -0.19
SKA2-205ENST00000580541 HRASLS2Q9NWW9 162 aa13.85□□□□□ -0.19
SKA2-205ENST00000580541 WWOXQ9NZC7 414 aa13.85□□□□□ -0.19
SKA2-205ENST00000580541 CPSF2Q9P2I0 782 aaKnown RBP13.85□□□□□ -0.19
SKA2-205ENST00000580541 RAPGEFL1Q9UHV5 662 aa13.85□□□□□ -0.19
SKA2-205ENST00000580541 CDV3Q9UKY7 258 aaKnown RBP13.85□□□□□ -0.19
SKA2-205ENST00000580541 PCDHGA1Q9Y5H4 931 aa13.85□□□□□ -0.19
SKA2-205ENST00000580541 MYO15AQ9UKN7 3530 aa13.85□□□□□ -0.19
SKA2-205ENST00000580541 PIPSLA2A3N6 862 aa13.84□□□□□ -0.19
SKA2-205ENST00000580541 OR6C74A6NCV1 312 aa13.84□□□□□ -0.19
SKA2-205ENST00000580541 NCF1BA6NI72 391 aaPredicted RBP13.84□□□□□ -0.19
SKA2-205ENST00000580541 NCF1CA8MVU1 366 aaPredicted RBP13.84□□□□□ -0.19
SKA2-205ENST00000580541 C2orf74A8MZ97 194 aa13.84□□□□□ -0.19
SKA2-205ENST00000580541 STX16-NPEPL1H3BU86 382 aa13.84□□□□□ -0.19
SKA2-205ENST00000580541 STX16O14662 325 aa13.84□□□□□ -0.19
SKA2-205ENST00000580541 PLIN3O60664 434 aa13.84□□□□□ -0.19
SKA2-205ENST00000580541 CBFA2T3O75081 653 aa13.84□□□□□ -0.19
SKA2-205ENST00000580541 CCNDBP1O95273 360 aa13.84□□□□□ -0.19
SKA2-205ENST00000580541 PROCP04070 461 aa13.84□□□□□ -0.19
SKA2-205ENST00000580541 NCF1P14598 390 aaPredicted RBP13.84□□□□□ -0.19
SKA2-205ENST00000580541 PKLRP30613 574 aa13.84□□□□□ -0.19
SKA2-205ENST00000580541 RPA3P35244 121 aaPredicted RBP13.84□□□□□ -0.19
SKA2-205ENST00000580541 GGT5P36269 586 aa13.84□□□□□ -0.19
SKA2-205ENST00000580541 KCNC1P48547 511 aa13.84□□□□□ -0.19
SKA2-205ENST00000580541 PIK3CGP48736 1102 aa13.84□□□□□ -0.19
SKA2-205ENST00000580541 TRIP6Q15654 476 aaKnown RBP13.84□□□□□ -0.19
SKA2-205ENST00000580541 PFKFB4Q16877 469 aa13.84□□□□□ -0.19
SKA2-205ENST00000580541 THEMIS2Q5TEJ8 643 aa13.84□□□□□ -0.19
SKA2-205ENST00000580541 HHATQ5VTY9 493 aa13.84□□□□□ -0.19
SKA2-205ENST00000580541 C16orf46Q6P387 395 aa13.84□□□□□ -0.19
SKA2-205ENST00000580541 GUSBP11Q6P575 273 aa13.84□□□□□ -0.19
SKA2-205ENST00000580541 GLRX5Q86SX6 157 aa13.84□□□□□ -0.19
SKA2-205ENST00000580541 SFTPA2Q8IWL1 248 aa13.84□□□□□ -0.19
SKA2-205ENST00000580541 ARFGAP2Q8N6H7 521 aa13.84□□□□□ -0.19
SKA2-205ENST00000580541 Q8N9G6 341 aaPredicted RBP13.84□□□□□ -0.19
SKA2-205ENST00000580541 ZNF480Q8WV37 535 aa13.84□□□□□ -0.19
SKA2-205ENST00000580541 EXT2Q93063 718 aa13.84□□□□□ -0.19
SKA2-205ENST00000580541 ZBTB9Q96C00 473 aa13.84□□□□□ -0.19
SKA2-205ENST00000580541 RHBDF1Q96CC6 855 aa13.84□□□□□ -0.19
SKA2-205ENST00000580541 FAM122AQ96E09 287 aa13.84□□□□□ -0.19
SKA2-205ENST00000580541 CCDC3Q9BQI4 270 aa13.84□□□□□ -0.19
SKA2-205ENST00000580541 HAUS8Q9BT25 410 aa13.84□□□□□ -0.19
SKA2-205ENST00000580541 ZMYND15Q9H091 742 aa13.84□□□□□ -0.19
SKA2-205ENST00000580541 CCDC177Q9NQR7 707 aaPredicted RBP13.84□□□□□ -0.19
SKA2-205ENST00000580541 STOX2Q9P2F5 926 aaPredicted RBP13.84□□□□□ -0.19
SKA2-205ENST00000580541 PTBP2Q9UKA9 531 aaKnown RBP13.84□□□□□ -0.19
SKA2-205ENST00000580541 ICKQ9UPZ9 632 aa13.84□□□□□ -0.19
SKA2-205ENST00000580541 PCDHB11Q9Y5F2 797 aa13.84□□□□□ -0.19
SKA2-205ENST00000580541 UNC13CQ8NB66 2214 aa13.84□□□□□ -0.19
SKA2-205ENST00000580541 LAMA1P25391 3075 aa13.84□□□□□ -0.19
SKA2-205ENST00000580541 IGHV1OR21-1A0A087WYE8 117 aa13.83□□□□□ -0.2
SKA2-205ENST00000580541 LY6G6EA0A0G2JKS1 128 aa13.83□□□□□ -0.2
SKA2-205ENST00000580541 OR5K3A6NET4 321 aa13.83□□□□□ -0.2
SKA2-205ENST00000580541 ISM1B1AKI9 464 aa13.83□□□□□ -0.2
SKA2-205ENST00000580541 UBXN8O00124 270 aa13.83□□□□□ -0.2
SKA2-205ENST00000580541 SLC30A4O14863 429 aa13.83□□□□□ -0.2
SKA2-205ENST00000580541 KLK8O60259 260 aa13.83□□□□□ -0.2
SKA2-205ENST00000580541 STK16O75716 305 aa13.83□□□□□ -0.2
SKA2-205ENST00000580541 CHRM5P08912 532 aaPredicted RBP13.83□□□□□ -0.2
SKA2-205ENST00000580541 ERGP11308 486 aa13.83□□□□□ -0.2
SKA2-205ENST00000580541 NEFHP12036 1026 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms