RNA–Protein interactions for RNA: ENST00000577539.1

VAPA-203, Transcript of VAMP associated protein A, humanhuman

Gene VAPA, Length 3,760 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-203ENST00000577539 TYW5A2RUC4 315 aaKnown RBP5.25□□□□□ -1.57
VAPA-203ENST00000577539 M0R082 166 aa5.25□□□□□ -1.57
VAPA-203ENST00000577539 KDELR3O43731 214 aa5.25□□□□□ -1.57
VAPA-203ENST00000577539 PENKP01210 267 aaPredicted RBP5.25□□□□□ -1.57
VAPA-203ENST00000577539 PRLP01236 227 aa5.25□□□□□ -1.57
VAPA-203ENST00000577539 ASLP04424 464 aa5.25□□□□□ -1.57
VAPA-203ENST00000577539 RPS17P08708 135 aaKnown RBP5.25□□□□□ -1.57
VAPA-203ENST00000577539 G6PDP11413 515 aa5.25□□□□□ -1.57
VAPA-203ENST00000577539 SLC5A2P31639 672 aa5.25□□□□□ -1.57
VAPA-203ENST00000577539 GKP32189 559 aa5.25□□□□□ -1.57
VAPA-203ENST00000577539 PSMD8P48556 350 aa5.25□□□□□ -1.57
VAPA-203ENST00000577539 RGS4P49798 205 aa5.25□□□□□ -1.57
VAPA-203ENST00000577539 HK3P52790 923 aa5.25□□□□□ -1.57
VAPA-203ENST00000577539 OR4D2P58180 307 aa5.25□□□□□ -1.57
VAPA-203ENST00000577539 ERVPABLB-1P60509 514 aa5.25□□□□□ -1.57
VAPA-203ENST00000577539 ERVK-8P63133 956 aa5.25□□□□□ -1.57
VAPA-203ENST00000577539 TXNL4AP83876 142 aaKnown RBP5.25□□□□□ -1.57
VAPA-203ENST00000577539 SMAD3P84022 425 aaKnown RBP5.25□□□□□ -1.57
VAPA-203ENST00000577539 IL1RL1Q01638 556 aa5.25□□□□□ -1.57
VAPA-203ENST00000577539 ID3Q02535 119 aa5.25□□□□□ -1.57
VAPA-203ENST00000577539 PPP1R8Q12972 351 aaKnown RBP5.25□□□□□ -1.57
VAPA-203ENST00000577539 TGFBIQ15582 683 aa5.25□□□□□ -1.57
VAPA-203ENST00000577539 TYSND1Q2T9J0 566 aa5.25□□□□□ -1.57
VAPA-203ENST00000577539 NANOGP8Q6NSW7 305 aa5.25□□□□□ -1.57
VAPA-203ENST00000577539 DEFB128Q7Z7B8 93 aa5.25□□□□□ -1.57
VAPA-203ENST00000577539 ADGRG5Q8IZF4 528 aa5.25□□□□□ -1.57
VAPA-203ENST00000577539 OR2T11Q8NH01 316 aa5.25□□□□□ -1.57
VAPA-203ENST00000577539 ZNF417Q8TAU3 575 aa5.25□□□□□ -1.57
VAPA-203ENST00000577539 NCSTNQ92542 709 aa5.25□□□□□ -1.57
VAPA-203ENST00000577539 PEX13Q92968 403 aa5.25□□□□□ -1.57
VAPA-203ENST00000577539 ZUFSPQ96AP4 578 aa5.25□□□□□ -1.57
VAPA-203ENST00000577539 TMEM125Q96AQ2 219 aa5.25□□□□□ -1.57
VAPA-203ENST00000577539 ZNF587Q96SQ5 575 aaPredicted RBP5.25□□□□□ -1.57
VAPA-203ENST00000577539 CHID1Q9BWS9 393 aa5.25□□□□□ -1.57
VAPA-203ENST00000577539 CIPCQ9C0C6 399 aa5.25□□□□□ -1.57
VAPA-203ENST00000577539 ADNPQ9H2P0 1102 aa5.25□□□□□ -1.57
VAPA-203ENST00000577539 NSUN3Q9H649 340 aaKnown RBP5.25□□□□□ -1.57
VAPA-203ENST00000577539 IPPKQ9H8X2 491 aa5.25□□□□□ -1.57
VAPA-203ENST00000577539 NANOGQ9H9S0 305 aa5.25□□□□□ -1.57
VAPA-203ENST00000577539 PDFQ9HBH1 243 aa5.25□□□□□ -1.57
VAPA-203ENST00000577539 POPDC3Q9HBV1 291 aa5.25□□□□□ -1.57
VAPA-203ENST00000577539 OLAHQ9NV23 265 aa5.25□□□□□ -1.57
VAPA-203ENST00000577539 KLQ9UEF7 1012 aa5.25□□□□□ -1.57
VAPA-203ENST00000577539 CRLS1Q9UJA2 301 aa5.25□□□□□ -1.57
VAPA-203ENST00000577539 CNOT11Q9UKZ1 510 aaKnown RBP5.25□□□□□ -1.57
VAPA-203ENST00000577539 MED16Q9Y2X0 877 aa5.25□□□□□ -1.57
VAPA-203ENST00000577539 SQORQ9Y6N5 450 aa5.25□□□□□ -1.57
VAPA-203ENST00000577539 SCN10AQ9Y5Y9 1956 aa5.25□□□□□ -1.57
VAPA-203ENST00000577539 C1orf232A0A0U1RR37 186 aa5.25□□□□□ -1.57
VAPA-203ENST00000577539 TMEM189-UBE2V1I3L0A0 370 aa5.25□□□□□ -1.57
VAPA-203ENST00000577539 K7ERQ8 282 aa5.25□□□□□ -1.57
VAPA-203ENST00000577539 PRRG1O14668 218 aa5.25□□□□□ -1.57
VAPA-203ENST00000577539 WNT9AO14904 365 aa5.25□□□□□ -1.57
VAPA-203ENST00000577539 WISP3O95389 354 aaPredicted RBP5.25□□□□□ -1.57
VAPA-203ENST00000577539 GALTP07902 379 aa5.25□□□□□ -1.57
VAPA-203ENST00000577539 PIM1P11309 404 aaPredicted RBP5.25□□□□□ -1.57
VAPA-203ENST00000577539 ADH5P11766 374 aa5.25□□□□□ -1.57
VAPA-203ENST00000577539 FCGR1AP12314 374 aa5.25□□□□□ -1.57
VAPA-203ENST00000577539 HSD17B1P14061 328 aa5.25□□□□□ -1.57
VAPA-203ENST00000577539 CDH2P19022 906 aaPredicted RBP5.25□□□□□ -1.57
VAPA-203ENST00000577539 TUFMP49411 452 aaKnown RBP5.25□□□□□ -1.57
VAPA-203ENST00000577539 SUOXP51687 545 aa5.25□□□□□ -1.57
VAPA-203ENST00000577539 CCL23P55773 120 aa5.25□□□□□ -1.57
VAPA-203ENST00000577539 HMGCS1Q01581 520 aa5.25□□□□□ -1.57
VAPA-203ENST00000577539 ELAVL2Q12926 359 aaKnown RBP5.25□□□□□ -1.57
VAPA-203ENST00000577539 ARHGEF7Q14155 803 aa5.25□□□□□ -1.57
VAPA-203ENST00000577539 SETMARQ53H47 684 aaPredicted RBP5.25□□□□□ -1.57
VAPA-203ENST00000577539 TMTC4Q5T4D3 741 aa5.25□□□□□ -1.57
VAPA-203ENST00000577539 ARMC12Q5T9G4 340 aa5.25□□□□□ -1.57
VAPA-203ENST00000577539 LETMD1Q6P1Q0 360 aa5.25□□□□□ -1.57
VAPA-203ENST00000577539 CARM1Q86X55 608 aa5.25□□□□□ -1.57
VAPA-203ENST00000577539 PHYKPLQ8IUZ5 450 aa5.25□□□□□ -1.57
VAPA-203ENST00000577539 ANKFN1Q8N957 763 aa5.25□□□□□ -1.57
VAPA-203ENST00000577539 OR4F6Q8NGB9 312 aa5.25□□□□□ -1.57
VAPA-203ENST00000577539 CDC26Q8NHZ8 85 aa5.25□□□□□ -1.57
VAPA-203ENST00000577539 ITFG1Q8TB96 612 aa5.25□□□□□ -1.57
VAPA-203ENST00000577539 CD200R1Q8TD46 325 aa5.25□□□□□ -1.57
VAPA-203ENST00000577539 FATE1Q969F0 183 aa5.25□□□□□ -1.57
VAPA-203ENST00000577539 WBP2Q969T9 261 aa5.25□□□□□ -1.57
VAPA-203ENST00000577539 SDCCAG3Q96C92 435 aa5.25□□□□□ -1.57
VAPA-203ENST00000577539 BIRC8Q96P09 236 aa5.25□□□□□ -1.57
VAPA-203ENST00000577539 PLEKHG4BQ96PX9 1271 aa5.25□□□□□ -1.57
VAPA-203ENST00000577539 TRIB3Q96RU7 358 aa5.25□□□□□ -1.57
VAPA-203ENST00000577539 GPATCH1Q9BRR8 931 aaKnown RBP5.25□□□□□ -1.57
VAPA-203ENST00000577539 TRIM54Q9BYV2 358 aa5.25□□□□□ -1.57
VAPA-203ENST00000577539 SLC2A11Q9BYW1 496 aa5.25□□□□□ -1.57
VAPA-203ENST00000577539 EPB41L1Q9H4G0 881 aa5.25□□□□□ -1.57
VAPA-203ENST00000577539 POLR1BQ9H9Y6 1135 aa5.25□□□□□ -1.57
VAPA-203ENST00000577539 AASDHPPTQ9NRN7 309 aa5.25□□□□□ -1.57
VAPA-203ENST00000577539 MARCH5Q9NX47 278 aa5.25□□□□□ -1.57
VAPA-203ENST00000577539 DUS2Q9NX74 493 aaKnown RBP5.25□□□□□ -1.57
VAPA-203ENST00000577539 PKD2L2Q9NZM6 624 aa5.25□□□□□ -1.57
VAPA-203ENST00000577539 SLC8A2Q9UPR5 921 aa5.25□□□□□ -1.57
VAPA-203ENST00000577539 TBC1D30Q9Y2I9 924 aa5.25□□□□□ -1.57
VAPA-203ENST00000577539 OAS3Q9Y6K5 1087 aaKnown RBP5.25□□□□□ -1.57
VAPA-203ENST00000577539 ILVBLA1L0T0 632 aa5.24□□□□□ -1.57
VAPA-203ENST00000577539 C2orf78A6NCI8 922 aa5.24□□□□□ -1.57
VAPA-203ENST00000577539 ZNF840PA6NDX5 716 aa5.24□□□□□ -1.57
VAPA-203ENST00000577539 PABPN1LA6NDY0 278 aaKnown RBP5.24□□□□□ -1.57
VAPA-203ENST00000577539 RAD51BO15315 384 aa5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms