RNA–Protein interactions for RNA: ENST00000576222.1

PCDHGB3-201, Transcript of protocadherin gamma subfamily B, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGB3, Length 4,727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3-201ENST00000576222 SMYD5Q6GMV2 418 aa12.85□□□□□ -0.35
PCDHGB3-201ENST00000576222 MSANTD2Q6P1R3 559 aa12.85□□□□□ -0.35
PCDHGB3-201ENST00000576222 SERPINA9Q86WD7 417 aa12.85□□□□□ -0.35
PCDHGB3-201ENST00000576222 MYO19Q96H55 970 aa12.85□□□□□ -0.35
PCDHGB3-201ENST00000576222 TMEM169Q96HH4 297 aa12.85□□□□□ -0.35
PCDHGB3-201ENST00000576222 ACBD6Q9BR61 282 aa12.85□□□□□ -0.35
PCDHGB3-201ENST00000576222 AIG1Q9NVV5 245 aa12.85□□□□□ -0.35
PCDHGB3-201ENST00000576222 C14orf119Q9NWQ9 140 aa12.85□□□□□ -0.35
PCDHGB3-201ENST00000576222 POFUT2Q9Y2G5 429 aa12.85□□□□□ -0.35
PCDHGB3-201ENST00000576222 GLYATL1P3A0A0U1RQE8 302 aa12.85□□□□□ -0.35
PCDHGB3-201ENST00000576222 FAM72CH0Y354 149 aa12.85□□□□□ -0.35
PCDHGB3-201ENST00000576222 CHST10O43529 356 aa12.85□□□□□ -0.35
PCDHGB3-201ENST00000576222 DFNA5O60443 496 aa12.85□□□□□ -0.35
PCDHGB3-201ENST00000576222 CLDN11O75508 207 aa12.85□□□□□ -0.35
PCDHGB3-201ENST00000576222 EEDO75530 441 aaKnown RBP12.85□□□□□ -0.35
PCDHGB3-201ENST00000576222 CSF2P04141 144 aa12.85□□□□□ -0.35
PCDHGB3-201ENST00000576222 OR4Q2P0C623 313 aa12.85□□□□□ -0.35
PCDHGB3-201ENST00000576222 SPATA31D3P0C874 917 aa12.85□□□□□ -0.35
PCDHGB3-201ENST00000576222 CYP2A6P11509 494 aaPredicted RBP12.85□□□□□ -0.35
PCDHGB3-201ENST00000576222 BMP7P18075 431 aa12.85□□□□□ -0.35
PCDHGB3-201ENST00000576222 CAPN3P20807 821 aa12.85□□□□□ -0.35
PCDHGB3-201ENST00000576222 LEPRP48357 1165 aaKnown RBP12.85□□□□□ -0.35
PCDHGB3-201ENST00000576222 MANFP55145 182 aaKnown RBP12.85□□□□□ -0.35
PCDHGB3-201ENST00000576222 TAF10Q12962 218 aa12.85□□□□□ -0.35
PCDHGB3-201ENST00000576222 GRIK2Q13002 908 aa12.85□□□□□ -0.35
PCDHGB3-201ENST00000576222 MAB21L1Q13394 359 aa12.85□□□□□ -0.35
PCDHGB3-201ENST00000576222 LRP8Q14114 963 aa12.85□□□□□ -0.35
PCDHGB3-201ENST00000576222 SLC36A3Q495N2 470 aa12.85□□□□□ -0.35
PCDHGB3-201ENST00000576222 COQ5Q5HYK3 327 aa12.85□□□□□ -0.35
PCDHGB3-201ENST00000576222 FAM72AQ5TYM5 149 aa12.85□□□□□ -0.35
PCDHGB3-201ENST00000576222 FAM72DQ6L9T8 149 aa12.85□□□□□ -0.35
PCDHGB3-201ENST00000576222 SPATA31D4Q6ZUB0 917 aa12.85□□□□□ -0.35
PCDHGB3-201ENST00000576222 FAM72BQ86X60 149 aa12.85□□□□□ -0.35
PCDHGB3-201ENST00000576222 TMEM102Q8N9M5 508 aaPredicted RBP12.85□□□□□ -0.35
PCDHGB3-201ENST00000576222 OR8J3Q8NGG0 315 aa12.85□□□□□ -0.35
PCDHGB3-201ENST00000576222 NAA50Q9GZZ1 169 aaKnown RBP12.85□□□□□ -0.35
PCDHGB3-201ENST00000576222 AGPAT4Q9NRZ5 378 aa12.85□□□□□ -0.35
PCDHGB3-201ENST00000576222 OLAHQ9NV23 265 aa12.85□□□□□ -0.35
PCDHGB3-201ENST00000576222 TAS2R9Q9NYW1 312 aa12.85□□□□□ -0.35
PCDHGB3-201ENST00000576222 SPIN1Q9Y657 262 aaPredicted RBP12.85□□□□□ -0.35
PCDHGB3-201ENST00000576222 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.85□□□□□ -0.35
PCDHGB3-201ENST00000576222 ZNF26P17031 533 aaPredicted RBP12.85□□□□□ -0.35
PCDHGB3-201ENST00000576222 TACR2P21452 398 aa12.85□□□□□ -0.35
PCDHGB3-201ENST00000576222 INHBCP55103 352 aa12.85□□□□□ -0.35
PCDHGB3-201ENST00000576222 MRPS6P82932 125 aaKnown RBP12.85□□□□□ -0.35
PCDHGB3-201ENST00000576222 ELMOD2Q8IZ81 293 aa12.85□□□□□ -0.35
PCDHGB3-201ENST00000576222 SCAMP5Q8TAC9 235 aa12.85□□□□□ -0.35
PCDHGB3-201ENST00000576222 CHPT1Q8WUD6 406 aa12.85□□□□□ -0.35
PCDHGB3-201ENST00000576222 UCKL1Q9NWZ5 548 aa12.85□□□□□ -0.35
PCDHGB3-201ENST00000576222 TVP23BQ9NYZ1 205 aa12.85□□□□□ -0.35
PCDHGB3-201ENST00000576222 RPS6KB2Q9UBS0 482 aa12.85□□□□□ -0.35
PCDHGB3-201ENST00000576222 ZNF232Q9UNY5 417 aa12.85□□□□□ -0.35
PCDHGB3-201ENST00000576222 ENTPD4Q9Y227 616 aa12.85□□□□□ -0.35
PCDHGB3-201ENST00000576222 NWD2Q9ULI1 1742 aa12.85□□□□□ -0.35
PCDHGB3-201ENST00000576222 A0A1W2PRG6 482 aa12.84□□□□□ -0.35
PCDHGB3-201ENST00000576222 ARVCFO00192 962 aa12.84□□□□□ -0.35
PCDHGB3-201ENST00000576222 STX16O14662 325 aa12.84□□□□□ -0.35
PCDHGB3-201ENST00000576222 PAPSS2O95340 614 aaPredicted RBP12.84□□□□□ -0.35
PCDHGB3-201ENST00000576222 CCNYL3P0C7X3 344 aa12.84□□□□□ -0.35
PCDHGB3-201ENST00000576222 STARP49675 285 aa12.84□□□□□ -0.35
PCDHGB3-201ENST00000576222 GPAT3Q53EU6 434 aa12.84□□□□□ -0.35
PCDHGB3-201ENST00000576222 OR4F3Q6IEY1 312 aa12.84□□□□□ -0.35
PCDHGB3-201ENST00000576222 TRAPPC5Q8IUR0 188 aa12.84□□□□□ -0.35
PCDHGB3-201ENST00000576222 ADGRG5Q8IZF4 528 aa12.84□□□□□ -0.35
PCDHGB3-201ENST00000576222 KCTD7Q96MP8 289 aa12.84□□□□□ -0.35
PCDHGB3-201ENST00000576222 DUSP26Q9BV47 211 aa12.84□□□□□ -0.35
PCDHGB3-201ENST00000576222 TBC1D17Q9HA65 648 aa12.84□□□□□ -0.35
PCDHGB3-201ENST00000576222 CENPBD1B2RD01 187 aa12.84□□□□□ -0.35
PCDHGB3-201ENST00000576222 DCLK1O15075 740 aa12.84□□□□□ -0.35
PCDHGB3-201ENST00000576222 TBL1XO60907 577 aa12.84□□□□□ -0.35
PCDHGB3-201ENST00000576222 PRKCGP05129 697 aa12.84□□□□□ -0.35
PCDHGB3-201ENST00000576222 PRPS1L1P21108 318 aa12.84□□□□□ -0.35
PCDHGB3-201ENST00000576222 TCEA1P23193 301 aaKnown RBP12.84□□□□□ -0.35
PCDHGB3-201ENST00000576222 PSMD4P55036 377 aaKnown RBP12.84□□□□□ -0.35
PCDHGB3-201ENST00000576222 GMFBP60983 142 aa12.84□□□□□ -0.35
PCDHGB3-201ENST00000576222 SNRPD1P62314 119 aaKnown RBP12.84□□□□□ -0.35
PCDHGB3-201ENST00000576222 HSF2Q03933 536 aa12.84□□□□□ -0.35
PCDHGB3-201ENST00000576222 C2orf80Q0P641 193 aa12.84□□□□□ -0.35
PCDHGB3-201ENST00000576222 NOL9Q5SY16 702 aaKnown RBP12.84□□□□□ -0.35
PCDHGB3-201ENST00000576222 MTSS1LQ765P7 747 aa12.84□□□□□ -0.35
PCDHGB3-201ENST00000576222 CDCA5Q96FF9 252 aa12.84□□□□□ -0.35
PCDHGB3-201ENST00000576222 ZDHHC6Q9H6R6 413 aa12.84□□□□□ -0.35
PCDHGB3-201ENST00000576222 KHDRBS3O75525 346 aaKnown RBP12.84□□□□□ -0.35
PCDHGB3-201ENST00000576222 KLHL18O94889 574 aa12.84□□□□□ -0.35
PCDHGB3-201ENST00000576222 DCDC1P59894 354 aa12.84□□□□□ -0.35
PCDHGB3-201ENST00000576222 NFKB2Q00653 900 aa12.84□□□□□ -0.35
PCDHGB3-201ENST00000576222 CXorf57Q6NSI4 855 aaKnown RBP12.84□□□□□ -0.35
PCDHGB3-201ENST00000576222 TBC1D15Q8TC07 691 aa12.84□□□□□ -0.35
PCDHGB3-201ENST00000576222 USP7Q93009 1102 aa12.84□□□□□ -0.35
PCDHGB3-201ENST00000576222 LRCH3Q96II8 777 aa12.84□□□□□ -0.35
PCDHGB3-201ENST00000576222 ART5Q96L15 291 aa12.84□□□□□ -0.35
PCDHGB3-201ENST00000576222 ADARB2Q9NS39 739 aaKnown RBP12.84□□□□□ -0.35
PCDHGB3-201ENST00000576222 RUVBL1Q9Y265 456 aaKnown RBP12.84□□□□□ -0.35
PCDHGB3-201ENST00000576222 OAS3Q9Y6K5 1087 aaKnown RBP12.84□□□□□ -0.35
PCDHGB3-201ENST00000576222 CCDC88AQ3V6T2 1871 aa12.84□□□□□ -0.35
PCDHGB3-201ENST00000576222 LRRC14BA6NHZ5 514 aa12.84□□□□□ -0.35
PCDHGB3-201ENST00000576222 DCKP27707 260 aa12.84□□□□□ -0.35
PCDHGB3-201ENST00000576222 CD40LGP29965 261 aa12.84□□□□□ -0.35
PCDHGB3-201ENST00000576222 MAPKAPK2P49137 400 aa12.84□□□□□ -0.35
PCDHGB3-201ENST00000576222 EPHB3P54753 998 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms