RNA–Protein interactions for RNA: ENST00000576218.5

SMG6-220, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 902 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-220ENST00000576218 ZBED8Q8IZ13 594 aa14.74□□□□□ -0.05
SMG6-220ENST00000576218 GPATCH11Q8N954 259 aa14.74□□□□□ -0.05
SMG6-220ENST00000576218 C2CD4AQ8NCU7 369 aaPredicted RBP14.74□□□□□ -0.05
SMG6-220ENST00000576218 FBXO36Q8NEA4 188 aa14.74□□□□□ -0.05
SMG6-220ENST00000576218 OR2L8Q8NGY9 312 aa14.74□□□□□ -0.05
SMG6-220ENST00000576218 ZNF501Q96CX3 271 aaPredicted RBP14.74□□□□□ -0.05
SMG6-220ENST00000576218 NDNQ99608 321 aa14.74□□□□□ -0.05
SMG6-220ENST00000576218 GPR21Q99679 349 aa14.74□□□□□ -0.05
SMG6-220ENST00000576218 ERP44Q9BS26 406 aa14.74□□□□□ -0.05
SMG6-220ENST00000576218 ZFATQ9P243 1243 aa14.74□□□□□ -0.05
SMG6-220ENST00000576218 CROTQ9UKG9 612 aa14.74□□□□□ -0.05
SMG6-220ENST00000576218 PADI1Q9ULC6 663 aa14.74□□□□□ -0.05
SMG6-220ENST00000576218 SSUH2Q9Y2M2 353 aa14.74□□□□□ -0.05
SMG6-220ENST00000576218 PCDHB3Q9Y5E6 796 aa14.74□□□□□ -0.05
SMG6-220ENST00000576218 E7EQ34 232 aa14.73□□□□□ -0.05
SMG6-220ENST00000576218 TIAF1O95411 115 aa14.73□□□□□ -0.05
SMG6-220ENST00000576218 ENO3P13929 434 aaPredicted RBP14.73□□□□□ -0.05
SMG6-220ENST00000576218 RGS4P49798 205 aa14.73□□□□□ -0.05
SMG6-220ENST00000576218 CLCN7P51798 805 aa14.73□□□□□ -0.05
SMG6-220ENST00000576218 CYP4F2P78329 520 aa14.73□□□□□ -0.05
SMG6-220ENST00000576218 MC1RQ01726 317 aa14.73□□□□□ -0.05
SMG6-220ENST00000576218 DEFB110Q30KQ9 67 aa14.73□□□□□ -0.05
SMG6-220ENST00000576218 C16orf46Q6P387 395 aa14.73□□□□□ -0.05
SMG6-220ENST00000576218 KIAA0408Q6ZU52 694 aa14.73□□□□□ -0.05
SMG6-220ENST00000576218 IGDCC3Q8IVU1 814 aa14.73□□□□□ -0.05
SMG6-220ENST00000576218 STARD8Q92502 1023 aa14.73□□□□□ -0.05
SMG6-220ENST00000576218 INPP5DQ92835 1189 aa14.73□□□□□ -0.05
SMG6-220ENST00000576218 MR1Q95460 341 aa14.73□□□□□ -0.05
SMG6-220ENST00000576218 AARSD1Q9BTE6 412 aaKnown RBP14.73□□□□□ -0.05
SMG6-220ENST00000576218 TAS2R13Q9NYV9 303 aa14.73□□□□□ -0.05
SMG6-220ENST00000576218 SPATA7Q9P0W8 599 aa14.73□□□□□ -0.05
SMG6-220ENST00000576218 WHRNQ9P202 907 aa14.73□□□□□ -0.05
SMG6-220ENST00000576218 GALPQ9UBC7 116 aa14.73□□□□□ -0.05
SMG6-220ENST00000576218 KCND3Q9UK17 655 aa14.73□□□□□ -0.05
SMG6-220ENST00000576218 NBEAQ8NFP9 2946 aa14.72□□□□□ -0.05
SMG6-220ENST00000576218 ZNF839A8K0R7 811 aa14.72□□□□□ -0.05
SMG6-220ENST00000576218 TPBGLP0DKB5 382 aa14.72□□□□□ -0.05
SMG6-220ENST00000576218 ATXN8OSP0DMR3 200 aa14.72□□□□□ -0.05
SMG6-220ENST00000576218 CBSLP0DN79 551 aa14.72□□□□□ -0.05
SMG6-220ENST00000576218 TCN2P20062 427 aa14.72□□□□□ -0.05
SMG6-220ENST00000576218 MAGP20916 626 aa14.72□□□□□ -0.05
SMG6-220ENST00000576218 MCM3P25205 808 aa14.72□□□□□ -0.05
SMG6-220ENST00000576218 CBSP35520 551 aa14.72□□□□□ -0.05
SMG6-220ENST00000576218 PDAP1Q13442 181 aaKnown RBP14.72□□□□□ -0.05
SMG6-220ENST00000576218 LRRC8EQ6NSJ5 796 aa14.72□□□□□ -0.05
SMG6-220ENST00000576218 C8orf74Q6P047 294 aa14.72□□□□□ -0.05
SMG6-220ENST00000576218 ZNF549Q6P9A3 640 aa14.72□□□□□ -0.05
SMG6-220ENST00000576218 CDHR3Q6ZTQ4 885 aa14.72□□□□□ -0.05
SMG6-220ENST00000576218 CCDC25Q86WR0 208 aa14.72□□□□□ -0.05
SMG6-220ENST00000576218 CPNE9Q8IYJ1 553 aa14.72□□□□□ -0.05
SMG6-220ENST00000576218 LMNTD1Q8N9Z9 388 aa14.72□□□□□ -0.05
SMG6-220ENST00000576218 LINC01555Q8NAE3 123 aa14.72□□□□□ -0.05
SMG6-220ENST00000576218 OR1L3Q8NH93 324 aa14.72□□□□□ -0.05
SMG6-220ENST00000576218 PYROXD1Q8WU10 500 aa14.72□□□□□ -0.05
SMG6-220ENST00000576218 SNRNP27Q8WVK2 155 aaKnown RBP14.72□□□□□ -0.05
SMG6-220ENST00000576218 ACTR5Q9H9F9 607 aaPredicted RBP14.72□□□□□ -0.05
SMG6-220ENST00000576218 SAYSD1Q9NPB0 183 aa14.72□□□□□ -0.05
SMG6-220ENST00000576218 LHX9Q9NQ69 397 aa14.72□□□□□ -0.05
SMG6-220ENST00000576218 ABCF3Q9NUQ8 709 aa14.72□□□□□ -0.05
SMG6-220ENST00000576218 TXNDC16Q9P2K2 825 aa14.72□□□□□ -0.05
SMG6-220ENST00000576218 DHRS7Q9Y394 339 aa14.72□□□□□ -0.05
SMG6-220ENST00000576218 TEX264Q9Y6I9 313 aa14.72□□□□□ -0.05
SMG6-220ENST00000576218 KRT87PA6NCN2 255 aa14.71□□□□□ -0.05
SMG6-220ENST00000576218 ARHGEF33A8MVX0 844 aa14.71□□□□□ -0.05
SMG6-220ENST00000576218 ATXN7O15265 892 aaPredicted RBP14.71□□□□□ -0.05
SMG6-220ENST00000576218 ZBTB14O43829 449 aa14.71□□□□□ -0.05
SMG6-220ENST00000576218 OR2B3O76000 313 aa14.71□□□□□ -0.05
SMG6-220ENST00000576218 MATN4O95460 622 aa14.71□□□□□ -0.05
SMG6-220ENST00000576218 HBQ1P09105 142 aa14.71□□□□□ -0.05
SMG6-220ENST00000576218 MPC1LP0DKB6 136 aa14.71□□□□□ -0.05
SMG6-220ENST00000576218 WT1P19544 449 aaPredicted RBP14.71□□□□□ -0.05
SMG6-220ENST00000576218 OAS2P29728 719 aaKnown RBP14.71□□□□□ -0.05
SMG6-220ENST00000576218 PEBP1P30086 187 aaKnown RBP14.71□□□□□ -0.05
SMG6-220ENST00000576218 RPA3P35244 121 aaPredicted RBP14.71□□□□□ -0.05
SMG6-220ENST00000576218 SKIV2L2P42285 1042 aaKnown RBP14.71□□□□□ -0.05
SMG6-220ENST00000576218 RPS15P62841 145 aaKnown RBP14.71□□□□□ -0.05
SMG6-220ENST00000576218 CCSMST1Q4G0I0 132 aa14.71□□□□□ -0.05
SMG6-220ENST00000576218 NEK10Q6ZWH5 1172 aa14.71□□□□□ -0.05
SMG6-220ENST00000576218 FAM20CQ8IXL6 584 aa14.71□□□□□ -0.05
SMG6-220ENST00000576218 SYTL1Q8IYJ3 562 aa14.71□□□□□ -0.05
SMG6-220ENST00000576218 MYO1HQ8N1T3 1032 aa14.71□□□□□ -0.05
SMG6-220ENST00000576218 OR9A1PQ8NGU1 263 aa14.71□□□□□ -0.05
SMG6-220ENST00000576218 GIMAP7Q8NHV1 300 aa14.71□□□□□ -0.05
SMG6-220ENST00000576218 CD200R1Q8TD46 325 aa14.71□□□□□ -0.05
SMG6-220ENST00000576218 SLC39A7Q92504 469 aa14.71□□□□□ -0.05
SMG6-220ENST00000576218 SLC45A3Q96JT2 553 aa14.71□□□□□ -0.05
SMG6-220ENST00000576218 SLC30A3Q99726 388 aa14.71□□□□□ -0.05
SMG6-220ENST00000576218 MIPEPQ99797 713 aa14.71□□□□□ -0.05
SMG6-220ENST00000576218 SPRY4Q9C004 299 aa14.71□□□□□ -0.05
SMG6-220ENST00000576218 TXLNGQ9NUQ3 528 aa14.71□□□□□ -0.05
SMG6-220ENST00000576218 KLHL42Q9P2K6 505 aa14.71□□□□□ -0.05
SMG6-220ENST00000576218 SLC17A6Q9P2U8 582 aa14.71□□□□□ -0.05
SMG6-220ENST00000576218 CDC23Q9UJX2 597 aa14.71□□□□□ -0.05
SMG6-220ENST00000576218 KLHL20Q9Y2M5 609 aa14.71□□□□□ -0.05
SMG6-220ENST00000576218 PSIP1O75475 530 aaKnown RBP14.7□□□□□ -0.06
SMG6-220ENST00000576218 SAT1P21673 171 aa14.7□□□□□ -0.06
SMG6-220ENST00000576218 CMPK1P30085 196 aa14.7□□□□□ -0.06
SMG6-220ENST00000576218 HSD17B2P37059 387 aa14.7□□□□□ -0.06
SMG6-220ENST00000576218 PLTPP55058 493 aa14.7□□□□□ -0.06
SMG6-220ENST00000576218 CAV1Q03135 178 aa14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms