RNA–Protein interactions for RNA: ENST00000575049.1

TSR1-203, Transcript of TSR1, ribosome maturation factor, humanhuman

TSL 3

Gene TSR1, Length 387 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSR1-203ENST00000575049 A0A0A0MQY5 61 aa4.8□□□□□ -1.64
TSR1-203ENST00000575049 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP4.8□□□□□ -1.64
TSR1-203ENST00000575049 CPED1A4D0V7 1026 aa4.8□□□□□ -1.64
TSR1-203ENST00000575049 TTC34A8MYJ7 566 aa4.8□□□□□ -1.64
TSR1-203ENST00000575049 FAM157AC9JC47 383 aa4.8□□□□□ -1.64
TSR1-203ENST00000575049 H0YIV9 168 aa4.8□□□□□ -1.64
TSR1-203ENST00000575049 CLDN4O14493 209 aa4.8□□□□□ -1.64
TSR1-203ENST00000575049 CTDSPLO15194 276 aa4.8□□□□□ -1.64
TSR1-203ENST00000575049 CTAGE5O15320 804 aa4.8□□□□□ -1.64
TSR1-203ENST00000575049 MPPED1O15442 326 aa4.8□□□□□ -1.64
TSR1-203ENST00000575049 PRAMEF11O60813 436 aa4.8□□□□□ -1.64
TSR1-203ENST00000575049 FCGR3BO75015 233 aa4.8□□□□□ -1.64
TSR1-203ENST00000575049 HSF2BPO75031 334 aa4.8□□□□□ -1.64
TSR1-203ENST00000575049 ATG13O75143 517 aa4.8□□□□□ -1.64
TSR1-203ENST00000575049 PGLSO95336 258 aa4.8□□□□□ -1.64
TSR1-203ENST00000575049 PAHP00439 452 aa4.8□□□□□ -1.64
TSR1-203ENST00000575049 CXCL10P02778 98 aa4.8□□□□□ -1.64
TSR1-203ENST00000575049 PGK2P07205 417 aa4.8□□□□□ -1.64
TSR1-203ENST00000575049 PLA2G4BP0C869 781 aa4.8□□□□□ -1.64
TSR1-203ENST00000575049 SLC6A6P31641 620 aa4.8□□□□□ -1.64
TSR1-203ENST00000575049 CCR1P32246 355 aa4.8□□□□□ -1.64
TSR1-203ENST00000575049 ZNF84P51523 738 aa4.8□□□□□ -1.64
TSR1-203ENST00000575049 ZNF75DP51815 510 aa4.8□□□□□ -1.64
TSR1-203ENST00000575049 INHBEP58166 350 aa4.8□□□□□ -1.64
TSR1-203ENST00000575049 NXPH1P58417 271 aa4.8□□□□□ -1.64
TSR1-203ENST00000575049 PPP2R2BQ00005 443 aa4.8□□□□□ -1.64
TSR1-203ENST00000575049 SORDQ00796 357 aa4.8□□□□□ -1.64
TSR1-203ENST00000575049 ITIH3Q06033 890 aa4.8□□□□□ -1.64
TSR1-203ENST00000575049 ZNF169Q14929 603 aaPredicted RBP4.8□□□□□ -1.64
TSR1-203ENST00000575049 SOWAHAQ2M3V2 549 aa4.8□□□□□ -1.64
TSR1-203ENST00000575049 TCTN1Q2MV58 587 aa4.8□□□□□ -1.64
TSR1-203ENST00000575049 FILIP1LQ4L180 1135 aa4.8□□□□□ -1.64
TSR1-203ENST00000575049 SGO1Q5FBB7 561 aa4.8□□□□□ -1.64
TSR1-203ENST00000575049 DDX59Q5T1V6 619 aaKnown RBP eCLIP4.8□□□□□ -1.64
TSR1-203ENST00000575049 VWA5B1Q5TIE3 1220 aa4.8□□□□□ -1.64
TSR1-203ENST00000575049 TBC1D9BQ66K14 1250 aa4.8□□□□□ -1.64
TSR1-203ENST00000575049 KIAA0895LQ68EN5 471 aa4.8□□□□□ -1.64
TSR1-203ENST00000575049 KCTD11Q693B1 232 aa4.8□□□□□ -1.64
TSR1-203ENST00000575049 WBP2NLQ6ICG8 309 aa4.8□□□□□ -1.64
TSR1-203ENST00000575049 SULT1C3Q6IMI6 304 aa4.8□□□□□ -1.64
TSR1-203ENST00000575049 NOTUMQ6P988 496 aa4.8□□□□□ -1.64
TSR1-203ENST00000575049 OLFML1Q6UWY5 402 aa4.8□□□□□ -1.64
TSR1-203ENST00000575049 TAS2R42Q7RTR8 314 aa4.8□□□□□ -1.64
TSR1-203ENST00000575049 TMEM173Q86WV6 379 aaPredicted RBP4.8□□□□□ -1.64
TSR1-203ENST00000575049 SPATA2LQ8IUW3 424 aaPredicted RBP4.8□□□□□ -1.64
TSR1-203ENST00000575049 AQP12AQ8IXF9 295 aa4.8□□□□□ -1.64
TSR1-203ENST00000575049 LRRC43Q8N309 656 aa4.8□□□□□ -1.64
TSR1-203ENST00000575049 TMEM217Q8N7C4 229 aa4.8□□□□□ -1.64
TSR1-203ENST00000575049 AMER3Q8N944 861 aa4.8□□□□□ -1.64
TSR1-203ENST00000575049 CCDC112Q8NEF3 446 aa4.8□□□□□ -1.64
TSR1-203ENST00000575049 OR52K1Q8NGK4 314 aa4.8□□□□□ -1.64
TSR1-203ENST00000575049 HUS1BQ8NHY5 278 aa4.8□□□□□ -1.64
TSR1-203ENST00000575049 IP6K1Q92551 441 aa4.8□□□□□ -1.64
TSR1-203ENST00000575049 FIG4Q92562 907 aa4.8□□□□□ -1.64
TSR1-203ENST00000575049 AP2M1Q96CW1 435 aa4.8□□□□□ -1.64
TSR1-203ENST00000575049 MSI2Q96DH6 328 aaKnown RBP4.8□□□□□ -1.64
TSR1-203ENST00000575049 SGF29Q96ES7 293 aa4.8□□□□□ -1.64
TSR1-203ENST00000575049 OTUB1Q96FW1 271 aaPredicted RBP4.8□□□□□ -1.64
TSR1-203ENST00000575049 KAZALD1Q96I82 304 aa4.8□□□□□ -1.64
TSR1-203ENST00000575049 EPSTI1Q96J88 318 aa4.8□□□□□ -1.64
TSR1-203ENST00000575049 PGBD1Q96JS3 809 aa4.8□□□□□ -1.64
TSR1-203ENST00000575049 SLC41A2Q96JW4 573 aa4.8□□□□□ -1.64
TSR1-203ENST00000575049 MS4A10Q96PG2 267 aa4.8□□□□□ -1.64
TSR1-203ENST00000575049 SLITRK1Q96PX8 696 aa4.8□□□□□ -1.64
TSR1-203ENST00000575049 CCDC77Q9BR77 488 aa4.8□□□□□ -1.64
TSR1-203ENST00000575049 MXRA8Q9BRK3 442 aa4.8□□□□□ -1.64
TSR1-203ENST00000575049 RNF26Q9BY78 433 aaPredicted RBP4.8□□□□□ -1.64
TSR1-203ENST00000575049 FRMD8Q9BZ67 464 aaPredicted RBP4.8□□□□□ -1.64
TSR1-203ENST00000575049 SLITRK6Q9H5Y7 841 aa4.8□□□□□ -1.64
TSR1-203ENST00000575049 CHMP1AQ9HD42 196 aaPredicted RBP4.8□□□□□ -1.64
TSR1-203ENST00000575049 KCNMB3Q9NPA1 279 aa4.8□□□□□ -1.64
TSR1-203ENST00000575049 PPANQ9NQ55 473 aaKnown RBP4.8□□□□□ -1.64
TSR1-203ENST00000575049 TCF7L2Q9NQB0 619 aa4.8□□□□□ -1.64
TSR1-203ENST00000575049 KLHL1Q9NR64 748 aa4.8□□□□□ -1.64
TSR1-203ENST00000575049 TMEM184CQ9NVA4 438 aa4.8□□□□□ -1.64
TSR1-203ENST00000575049 MTPAPQ9NVV4 582 aaKnown RBP eCLIP4.8□□□□□ -1.64
TSR1-203ENST00000575049 FOXJ2Q9P0K8 574 aa4.8□□□□□ -1.64
TSR1-203ENST00000575049 SEMA5BQ9P283 1151 aa4.8□□□□□ -1.64
TSR1-203ENST00000575049 POLKQ9UBT6 870 aa4.8□□□□□ -1.64
TSR1-203ENST00000575049 UBQLN2Q9UHD9 624 aa4.8□□□□□ -1.64
TSR1-203ENST00000575049 ATP6V1HQ9UI12 483 aa4.8□□□□□ -1.64
TSR1-203ENST00000575049 IPO11Q9UI26 975 aaKnown RBP4.8□□□□□ -1.64
TSR1-203ENST00000575049 TRAF3IP3Q9Y228 551 aa4.8□□□□□ -1.64
TSR1-203ENST00000575049 EXOC6BQ9Y2D4 811 aa4.8□□□□□ -1.64
TSR1-203ENST00000575049 CHTOPQ9Y3Y2 248 aaKnown RBP4.8□□□□□ -1.64
TSR1-203ENST00000575049 KIF1BO60333 1816 aa4.8□□□□□ -1.64
TSR1-203ENST00000575049 ANKRD26Q9UPS8 1709 aa4.8□□□□□ -1.64
TSR1-203ENST00000575049 NPATQ14207 1427 aa4.8□□□□□ -1.64
TSR1-203ENST00000575049 NCAPD2Q15021 1401 aa4.8□□□□□ -1.64
TSR1-203ENST00000575049 ELP1O95163 1332 aa4.79□□□□□ -1.64
TSR1-203ENST00000575049 MROH5Q6ZUA9 1318 aa4.79□□□□□ -1.64
TSR1-203ENST00000575049 PPLO60437 1756 aa4.79□□□□□ -1.64
TSR1-203ENST00000575049 HSPB2A8KAH6 182 aa4.79□□□□□ -1.64
TSR1-203ENST00000575049 E9PBE3 544 aa4.79□□□□□ -1.64
TSR1-203ENST00000575049 H0YGN5 161 aa4.79□□□□□ -1.64
TSR1-203ENST00000575049 EBAG9O00559 213 aa4.79□□□□□ -1.64
TSR1-203ENST00000575049 HS3ST1O14792 307 aa4.79□□□□□ -1.64
TSR1-203ENST00000575049 TEX28O15482 410 aa4.79□□□□□ -1.64
TSR1-203ENST00000575049 KIF1CO43896 1103 aaKnown RBP4.79□□□□□ -1.64
TSR1-203ENST00000575049 CAVIN2O95810 425 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms