RNA–Protein interactions for RNA: ENST00000572656.2

TRAPPC1-205, Transcript of trafficking protein particle complex 1, humanhuman

TSL 2

Gene TRAPPC1, Length 409 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-205ENST00000572656 ENTPD4Q9Y227 616 aa9.48□□□□□ -0.89
TRAPPC1-205ENST00000572656 OSGIN2Q9Y236 505 aa9.48□□□□□ -0.89
TRAPPC1-205ENST00000572656 PCDHA3Q9Y5H8 950 aa9.48□□□□□ -0.89
TRAPPC1-205ENST00000572656 CREBBPQ92793 2442 aa9.48□□□□□ -0.89
TRAPPC1-205ENST00000572656 CRYBG3Q68DQ2 2970 aa9.48□□□□□ -0.89
TRAPPC1-205ENST00000572656 ESPL1Q14674 2120 aa9.47□□□□□ -0.89
TRAPPC1-205ENST00000572656 ABCA12Q86UK0 2595 aa9.47□□□□□ -0.89
TRAPPC1-205ENST00000572656 MROH6A6NGR9 719 aa9.47□□□□□ -0.89
TRAPPC1-205ENST00000572656 ALOX12BO75342 701 aa9.47□□□□□ -0.89
TRAPPC1-205ENST00000572656 TJP3O95049 919 aa9.47□□□□□ -0.89
TRAPPC1-205ENST00000572656 OR56A5P0C7T3 313 aa9.47□□□□□ -0.89
TRAPPC1-205ENST00000572656 MAGP20916 626 aa9.47□□□□□ -0.89
TRAPPC1-205ENST00000572656 MSNP26038 577 aaKnown RBP9.47□□□□□ -0.89
TRAPPC1-205ENST00000572656 ELAVL4P26378 380 aaKnown RBP9.47□□□□□ -0.89
TRAPPC1-205ENST00000572656 PKLRP30613 574 aa9.47□□□□□ -0.89
TRAPPC1-205ENST00000572656 RAB28P51157 221 aa9.47□□□□□ -0.89
TRAPPC1-205ENST00000572656 CDC16Q13042 620 aa9.47□□□□□ -0.89
TRAPPC1-205ENST00000572656 POU6F1Q14863 301 aa9.47□□□□□ -0.89
TRAPPC1-205ENST00000572656 TLR1Q15399 786 aa9.47□□□□□ -0.89
TRAPPC1-205ENST00000572656 DNAJC21Q5F1R6 531 aaKnown RBP9.47□□□□□ -0.89
TRAPPC1-205ENST00000572656 YOD1Q5VVQ6 348 aaPredicted RBP9.47□□□□□ -0.89
TRAPPC1-205ENST00000572656 KIRREL2Q6UWL6 708 aa9.47□□□□□ -0.89
TRAPPC1-205ENST00000572656 ARHGEF18Q6ZSZ5 1173 aa9.47□□□□□ -0.89
TRAPPC1-205ENST00000572656 FAM20CQ8IXL6 584 aa9.47□□□□□ -0.89
TRAPPC1-205ENST00000572656 PARP9Q8IXQ6 854 aa9.47□□□□□ -0.89
TRAPPC1-205ENST00000572656 LINC01555Q8NAE3 123 aa9.47□□□□□ -0.89
TRAPPC1-205ENST00000572656 MARVELD3Q96A59 401 aa9.47□□□□□ -0.89
TRAPPC1-205ENST00000572656 SLC22A18Q96BI1 424 aa9.47□□□□□ -0.89
TRAPPC1-205ENST00000572656 VPS50Q96JG6 964 aa9.47□□□□□ -0.89
TRAPPC1-205ENST00000572656 CNDP1Q96KN2 507 aa9.47□□□□□ -0.89
TRAPPC1-205ENST00000572656 SPSB2Q99619 263 aa9.47□□□□□ -0.89
TRAPPC1-205ENST00000572656 LHPPQ9H008 270 aa9.47□□□□□ -0.89
TRAPPC1-205ENST00000572656 EPS8L2Q9H6S3 715 aa9.47□□□□□ -0.89
TRAPPC1-205ENST00000572656 ENAMQ9NRM1 1142 aa9.47□□□□□ -0.89
TRAPPC1-205ENST00000572656 NXT1Q9UKK6 140 aaKnown RBP9.47□□□□□ -0.89
TRAPPC1-205ENST00000572656 TFR2Q9UP52 801 aa9.47□□□□□ -0.89
TRAPPC1-205ENST00000572656 KLHL20Q9Y2M5 609 aa9.47□□□□□ -0.89
TRAPPC1-205ENST00000572656 PCDHA13Q9Y5I0 950 aa9.47□□□□□ -0.89
TRAPPC1-205ENST00000572656 HS3ST3B1Q9Y662 390 aa9.47□□□□□ -0.89
TRAPPC1-205ENST00000572656 MED13Q9UHV7 2174 aa9.47□□□□□ -0.89
TRAPPC1-205ENST00000572656 A0A1B0GUH1 482 aa9.46□□□□□ -0.9
TRAPPC1-205ENST00000572656 ARHGAP10A1A4S6 786 aa9.46□□□□□ -0.9
TRAPPC1-205ENST00000572656 OR51F1A6NGY5 319 aa9.46□□□□□ -0.9
TRAPPC1-205ENST00000572656 F8W8V4 182 aa9.46□□□□□ -0.9
TRAPPC1-205ENST00000572656 DSCR3O14972 297 aa9.46□□□□□ -0.9
TRAPPC1-205ENST00000572656 PSMD3O43242 534 aa9.46□□□□□ -0.9
TRAPPC1-205ENST00000572656 METTL18O95568 372 aa9.46□□□□□ -0.9
TRAPPC1-205ENST00000572656 RPN2P04844 631 aa9.46□□□□□ -0.9
TRAPPC1-205ENST00000572656 STSP08842 583 aa9.46□□□□□ -0.9
TRAPPC1-205ENST00000572656 FOXN2P32314 431 aa9.46□□□□□ -0.9
TRAPPC1-205ENST00000572656 CETN2P41208 172 aa9.46□□□□□ -0.9
TRAPPC1-205ENST00000572656 RWDD2BP57060 319 aa9.46□□□□□ -0.9
TRAPPC1-205ENST00000572656 TBX2Q13207 712 aaPredicted RBP9.46□□□□□ -0.9
TRAPPC1-205ENST00000572656 GRM7Q14831 915 aa9.46□□□□□ -0.9
TRAPPC1-205ENST00000572656 RBBP7Q16576 425 aa9.46□□□□□ -0.9
TRAPPC1-205ENST00000572656 TUBB8Q3ZCM7 444 aa9.46□□□□□ -0.9
TRAPPC1-205ENST00000572656 ZC3H12BQ5HYM0 836 aaKnown RBP9.46□□□□□ -0.9
TRAPPC1-205ENST00000572656 TCTE1Q5JU00 501 aa9.46□□□□□ -0.9
TRAPPC1-205ENST00000572656 SP5Q6BEB4 398 aaPredicted RBP9.46□□□□□ -0.9
TRAPPC1-205ENST00000572656 FCRL6Q6DN72 434 aa9.46□□□□□ -0.9
TRAPPC1-205ENST00000572656 RPUSD3Q6P087 351 aaKnown RBP9.46□□□□□ -0.9
TRAPPC1-205ENST00000572656 ISLR2Q6UXK2 745 aa9.46□□□□□ -0.9
TRAPPC1-205ENST00000572656 COX15Q7KZN9 410 aa9.46□□□□□ -0.9
TRAPPC1-205ENST00000572656 SLC22A15Q8IZD6 547 aa9.46□□□□□ -0.9
TRAPPC1-205ENST00000572656 FAM71DQ8N9W8 422 aa9.46□□□□□ -0.9
TRAPPC1-205ENST00000572656 OR11G2Q8NGC1 345 aa9.46□□□□□ -0.9
TRAPPC1-205ENST00000572656 ZDHHC19Q8WVZ1 309 aaPredicted RBP9.46□□□□□ -0.9
TRAPPC1-205ENST00000572656 THOC3Q96J01 351 aaKnown RBP9.46□□□□□ -0.9
TRAPPC1-205ENST00000572656 CALR3Q96L12 384 aaKnown RBP9.46□□□□□ -0.9
TRAPPC1-205ENST00000572656 ZNF285Q96NJ3 590 aa9.46□□□□□ -0.9
TRAPPC1-205ENST00000572656 LMF1Q96S06 567 aa9.46□□□□□ -0.9
TRAPPC1-205ENST00000572656 SLX1AQ9BQ83 275 aa9.46□□□□□ -0.9
TRAPPC1-205ENST00000572656 MENTQ9BUN1 341 aa9.46□□□□□ -0.9
TRAPPC1-205ENST00000572656 SOX17Q9H6I2 414 aaPredicted RBP9.46□□□□□ -0.9
TRAPPC1-205ENST00000572656 SEMA3GQ9NS98 782 aa9.46□□□□□ -0.9
TRAPPC1-205ENST00000572656 CUTCQ9NTM9 273 aa9.46□□□□□ -0.9
TRAPPC1-205ENST00000572656 INTS7Q9NVH2 962 aaKnown RBP9.46□□□□□ -0.9
TRAPPC1-205ENST00000572656 IL1RAPL1Q9NZN1 696 aa9.46□□□□□ -0.9
TRAPPC1-205ENST00000572656 CAMSAP3Q9P1Y5 1249 aaPredicted RBP9.46□□□□□ -0.9
TRAPPC1-205ENST00000572656 IMPACTQ9P2X3 320 aa9.46□□□□□ -0.9
TRAPPC1-205ENST00000572656 CCDC162PA2VCL2 907 aa9.45□□□□□ -0.9
TRAPPC1-205ENST00000572656 FITM1A5D6W6 292 aa9.45□□□□□ -0.9
TRAPPC1-205ENST00000572656 VSTM2BA6NLU5 285 aa9.45□□□□□ -0.9
TRAPPC1-205ENST00000572656 OR1I1O60431 355 aa9.45□□□□□ -0.9
TRAPPC1-205ENST00000572656 ZG16O60844 167 aa9.45□□□□□ -0.9
TRAPPC1-205ENST00000572656 S1PR4O95977 384 aa9.45□□□□□ -0.9
TRAPPC1-205ENST00000572656 PRF1P14222 555 aa9.45□□□□□ -0.9
TRAPPC1-205ENST00000572656 CD9P21926 228 aa9.45□□□□□ -0.9
TRAPPC1-205ENST00000572656 MCM3P25205 808 aa9.45□□□□□ -0.9
TRAPPC1-205ENST00000572656 CCR7P32248 378 aa9.45□□□□□ -0.9
TRAPPC1-205ENST00000572656 GRIA3P42263 894 aa9.45□□□□□ -0.9
TRAPPC1-205ENST00000572656 OR1D4P47884 311 aa9.45□□□□□ -0.9
TRAPPC1-205ENST00000572656 CARSP49589 748 aaKnown RBP9.45□□□□□ -0.9
TRAPPC1-205ENST00000572656 CSE1LP55060 971 aaKnown RBP9.45□□□□□ -0.9
TRAPPC1-205ENST00000572656 HSPA14Q0VDF9 509 aa9.45□□□□□ -0.9
TRAPPC1-205ENST00000572656 Q0VFX4 171 aa9.45□□□□□ -0.9
TRAPPC1-205ENST00000572656 MFAP5Q13361 173 aa9.45□□□□□ -0.9
TRAPPC1-205ENST00000572656 NAA30Q147X3 362 aaPredicted RBP9.45□□□□□ -0.9
TRAPPC1-205ENST00000572656 SPA17Q15506 151 aa9.45□□□□□ -0.9
TRAPPC1-205ENST00000572656 FAM214AQ32MH5 1076 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms