RNA–Protein interactions for RNA: ENST00000572083.5

CCDC40-206, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2

Gene CCDC40, Length 816 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-206ENST00000572083 RPUSD3Q6P087 351 aaKnown RBP19.04■□□□□ 0.64
CCDC40-206ENST00000572083 TBC1D21Q8IYX1 336 aa19.04■□□□□ 0.64
CCDC40-206ENST00000572083 DTWD1Q8N5C7 304 aa19.04■□□□□ 0.64
CCDC40-206ENST00000572083 OR5K2Q8NHB8 316 aa19.04■□□□□ 0.64
CCDC40-206ENST00000572083 ELMO1Q92556 727 aa19.04■□□□□ 0.64
CCDC40-206ENST00000572083 CCDC120Q96HB5 630 aa19.04■□□□□ 0.64
CCDC40-206ENST00000572083 TAAR6Q96RI8 345 aa19.04■□□□□ 0.64
CCDC40-206ENST00000572083 TRIM56Q9BRZ2 755 aaKnown RBP19.04■□□□□ 0.64
CCDC40-206ENST00000572083 SLC26A1Q9H2B4 701 aa19.04■□□□□ 0.64
CCDC40-206ENST00000572083 SPTLC3Q9NUV7 552 aa19.04■□□□□ 0.64
CCDC40-206ENST00000572083 POLG2Q9UHN1 485 aa19.04■□□□□ 0.64
CCDC40-206ENST00000572083 PRSS21Q9Y6M0 314 aa19.04■□□□□ 0.64
CCDC40-206ENST00000572083 CCDC168Q8NDH2 2452 aa19.03■□□□□ 0.64
CCDC40-206ENST00000572083 MYO7BQ6PIF6 2116 aa19.03■□□□□ 0.64
CCDC40-206ENST00000572083 TRGV8A0A0C4DH27 118 aa19.03■□□□□ 0.64
CCDC40-206ENST00000572083 H7C0C1 242 aa19.03■□□□□ 0.64
CCDC40-206ENST00000572083 LIN7AO14910 233 aaPredicted RBP19.03■□□□□ 0.64
CCDC40-206ENST00000572083 PCDH17O14917 1159 aa19.03■□□□□ 0.64
CCDC40-206ENST00000572083 DSCR3O14972 297 aa19.03■□□□□ 0.64
CCDC40-206ENST00000572083 PIM1P11309 404 aaPredicted RBP19.03■□□□□ 0.64
CCDC40-206ENST00000572083 ATP5OP48047 213 aa19.03■□□□□ 0.64
CCDC40-206ENST00000572083 TPM4P67936 248 aa19.03■□□□□ 0.64
CCDC40-206ENST00000572083 ARG2P78540 354 aa19.03■□□□□ 0.64
CCDC40-206ENST00000572083 KIR2DS3Q14952 304 aa19.03■□□□□ 0.64
CCDC40-206ENST00000572083 DBN1Q16643 649 aa19.03■□□□□ 0.64
CCDC40-206ENST00000572083 GFRALQ6UXV0 394 aa19.03■□□□□ 0.64
CCDC40-206ENST00000572083 CCDC50Q8IVM0 306 aa19.03■□□□□ 0.64
CCDC40-206ENST00000572083 MCATQ8IVS2 390 aaKnown RBP19.03■□□□□ 0.64
CCDC40-206ENST00000572083 PIANPQ8IYJ0 282 aa19.03■□□□□ 0.64
CCDC40-206ENST00000572083 LMNTD1Q8N9Z9 388 aa19.03■□□□□ 0.64
CCDC40-206ENST00000572083 NR4A3Q92570 626 aa19.03■□□□□ 0.64
CCDC40-206ENST00000572083 GOLPH3Q9H4A6 298 aa19.03■□□□□ 0.64
CCDC40-206ENST00000572083 ZNF160Q9HCG1 818 aa19.03■□□□□ 0.64
CCDC40-206ENST00000572083 CUTCQ9NTM9 273 aa19.03■□□□□ 0.64
CCDC40-206ENST00000572083 SMARCAL1Q9NZC9 954 aa19.03■□□□□ 0.64
CCDC40-206ENST00000572083 SUCOQ9UBS9 1254 aaKnown RBP19.03■□□□□ 0.64
CCDC40-206ENST00000572083 PSTPIP1O43586 416 aa19.02■□□□□ 0.64
CCDC40-206ENST00000572083 GSTM1P09488 218 aa19.02■□□□□ 0.64
CCDC40-206ENST00000572083 COX6B1P14854 86 aa19.02■□□□□ 0.64
CCDC40-206ENST00000572083 HTR1EP28566 365 aa19.02■□□□□ 0.64
CCDC40-206ENST00000572083 OR1D4P47884 311 aa19.02■□□□□ 0.64
CCDC40-206ENST00000572083 MARCKSL1P49006 195 aa19.02■□□□□ 0.64
CCDC40-206ENST00000572083 GSTM4Q03013 218 aa19.02■□□□□ 0.64
CCDC40-206ENST00000572083 SRSF11Q05519 484 aaKnown RBP19.02■□□□□ 0.64
CCDC40-206ENST00000572083 SPARCL1Q14515 664 aa19.02■□□□□ 0.64
CCDC40-206ENST00000572083 SYTL3Q4VX76 610 aa19.02■□□□□ 0.64
CCDC40-206ENST00000572083 DENND5AQ6IQ26 1287 aa19.02■□□□□ 0.64
CCDC40-206ENST00000572083 BNC2Q6ZN30 1099 aaPredicted RBP19.02■□□□□ 0.64
CCDC40-206ENST00000572083 MRGPRGQ86SM5 289 aa19.02■□□□□ 0.64
CCDC40-206ENST00000572083 TAX1BP1Q86VP1 789 aa19.02■□□□□ 0.64
CCDC40-206ENST00000572083 TBL1YQ9BQ87 522 aa19.02■□□□□ 0.64
CCDC40-206ENST00000572083 ANP32EQ9BTT0 268 aa19.02■□□□□ 0.64
CCDC40-206ENST00000572083 SEMA3GQ9NS98 782 aa19.02■□□□□ 0.64
CCDC40-206ENST00000572083 IFNKQ9P0W0 207 aa19.02■□□□□ 0.64
CCDC40-206ENST00000572083 CIDEBQ9UHD4 219 aa19.02■□□□□ 0.64
CCDC40-206ENST00000572083 SH3BGRL2Q9UJC5 107 aa19.02■□□□□ 0.64
CCDC40-206ENST00000572083 NXT1Q9UKK6 140 aaKnown RBP19.02■□□□□ 0.64
CCDC40-206ENST00000572083 AAR2Q9Y312 384 aaKnown RBP19.02■□□□□ 0.64
CCDC40-206ENST00000572083 MAU2Q9Y6X3 613 aa19.02■□□□□ 0.64
CCDC40-206ENST00000572083 AP2A2O94973 939 aa19.01■□□□□ 0.63
CCDC40-206ENST00000572083 AP2A1O95782 977 aa19.01■□□□□ 0.63
CCDC40-206ENST00000572083 ONECUT2O95948 504 aa19.01■□□□□ 0.63
CCDC40-206ENST00000572083 GRIA3P42263 894 aa19.01■□□□□ 0.63
CCDC40-206ENST00000572083 ANKRD20A2Q5SQ80 823 aa19.01■□□□□ 0.63
CCDC40-206ENST00000572083 ANKRD20A1Q5TYW2 823 aa19.01■□□□□ 0.63
CCDC40-206ENST00000572083 ANKRD20A3Q5VUR7 823 aa19.01■□□□□ 0.63
CCDC40-206ENST00000572083 C2orf73Q8N5S3 287 aaPredicted RBP19.01■□□□□ 0.63
CCDC40-206ENST00000572083 DENND1AQ8TEH3 1009 aa19.01■□□□□ 0.63
CCDC40-206ENST00000572083 C8orf44Q96CB5 159 aa19.01■□□□□ 0.63
CCDC40-206ENST00000572083 LMF1Q96S06 567 aa19.01■□□□□ 0.63
CCDC40-206ENST00000572083 CRB3Q9BUF7 120 aa19.01■□□□□ 0.63
CCDC40-206ENST00000572083 HEMGNQ9BXL5 484 aa19.01■□□□□ 0.63
CCDC40-206ENST00000572083 PLA2G3Q9NZ20 509 aa19.01■□□□□ 0.63
CCDC40-206ENST00000572083 PKDREJQ9NTG1 2253 aa19■□□□□ 0.63
CCDC40-206ENST00000572083 BHMG1C9JSJ3 638 aaPredicted RBP19■□□□□ 0.63
CCDC40-206ENST00000572083 UNC5CO95185 931 aa19■□□□□ 0.63
CCDC40-206ENST00000572083 ACPPP15309 386 aa19■□□□□ 0.63
CCDC40-206ENST00000572083 PKLRP30613 574 aa19■□□□□ 0.63
CCDC40-206ENST00000572083 CSE1LP55060 971 aaKnown RBP19■□□□□ 0.63
CCDC40-206ENST00000572083 PRPSAP1Q14558 356 aa19■□□□□ 0.63
CCDC40-206ENST00000572083 ZNF630Q2M218 657 aaPredicted RBP19■□□□□ 0.63
CCDC40-206ENST00000572083 CAVIN1Q6NZI2 390 aaKnown RBP19■□□□□ 0.63
CCDC40-206ENST00000572083 PRSS58Q8IYP2 241 aa19■□□□□ 0.63
CCDC40-206ENST00000572083 ZNF808Q8N4W9 903 aaPredicted RBP19■□□□□ 0.63
CCDC40-206ENST00000572083 LINC01555Q8NAE3 123 aa19■□□□□ 0.63
CCDC40-206ENST00000572083 VPS50Q96JG6 964 aa19■□□□□ 0.63
CCDC40-206ENST00000572083 DNAJC7Q99615 494 aa19■□□□□ 0.63
CCDC40-206ENST00000572083 C19orf43Q9BQ61 176 aa19■□□□□ 0.63
CCDC40-206ENST00000572083 TRIM8Q9BZR9 551 aa19■□□□□ 0.63
CCDC40-206ENST00000572083 CHST11Q9NPF2 352 aa19■□□□□ 0.63
CCDC40-206ENST00000572083 PTGFRNQ9P2B2 879 aa19■□□□□ 0.63
CCDC40-206ENST00000572083 SLC5A10A0PJK1 596 aa18.99■□□□□ 0.63
CCDC40-206ENST00000572083 MACROD2A1Z1Q3 448 aa18.99■□□□□ 0.63
CCDC40-206ENST00000572083 DYTNA2CJ06 578 aa18.99■□□□□ 0.63
CCDC40-206ENST00000572083 VSTM2BA6NLU5 285 aa18.99■□□□□ 0.63
CCDC40-206ENST00000572083 H7C0S8 307 aa18.99■□□□□ 0.63
CCDC40-206ENST00000572083 APOC4-APOC2K7ER74 178 aa18.99■□□□□ 0.63
CCDC40-206ENST00000572083 CCL21O00585 134 aa18.99■□□□□ 0.63
CCDC40-206ENST00000572083 MAP2K7O14733 419 aa18.99■□□□□ 0.63
CCDC40-206ENST00000572083 ZRANB2O95218 330 aaKnown RBP eCLIP18.99■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms