RNA–Protein interactions for RNA: ENST00000571018.5

TVP23B-204, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 2

Gene TVP23B, Length 718 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-204ENST00000571018 RAB11FIP5Q9BXF6 653 aa12.24□□□□□ -0.45
TVP23B-204ENST00000571018 CHRNA10Q9GZZ6 450 aa12.24□□□□□ -0.45
TVP23B-204ENST00000571018 KLHL25Q9H0H3 589 aa12.24□□□□□ -0.45
TVP23B-204ENST00000571018 LNPEPQ9UIQ6 1025 aa12.24□□□□□ -0.45
TVP23B-204ENST00000571018 SLC39A10Q9ULF5 831 aa12.24□□□□□ -0.45
TVP23B-204ENST00000571018 CHMP2BQ9UQN3 213 aa12.24□□□□□ -0.45
TVP23B-204ENST00000571018 RUVBL2Q9Y230 463 aaKnown RBP12.24□□□□□ -0.45
TVP23B-204ENST00000571018 DHRS7Q9Y394 339 aa12.24□□□□□ -0.45
TVP23B-204ENST00000571018 PTPRQQ9UMZ3 2332 aa12.23□□□□□ -0.45
TVP23B-204ENST00000571018 A0A0J9YY10 115 aa12.23□□□□□ -0.45
TVP23B-204ENST00000571018 ERVH48-1M5A8F1 160 aa12.23□□□□□ -0.45
TVP23B-204ENST00000571018 ATXN7O15265 892 aaPredicted RBP12.23□□□□□ -0.45
TVP23B-204ENST00000571018 PSIP1O75475 530 aaKnown RBP12.23□□□□□ -0.45
TVP23B-204ENST00000571018 GABRB3P28472 473 aa12.23□□□□□ -0.45
TVP23B-204ENST00000571018 CARSP49589 748 aaKnown RBP12.23□□□□□ -0.45
TVP23B-204ENST00000571018 PDIA2Q13087 525 aaKnown RBP12.23□□□□□ -0.45
TVP23B-204ENST00000571018 FRG1Q14331 258 aaKnown RBP12.23□□□□□ -0.45
TVP23B-204ENST00000571018 CCSMST1Q4G0I0 132 aa12.23□□□□□ -0.45
TVP23B-204ENST00000571018 TEDDM1Q5T9Z0 273 aa12.23□□□□□ -0.45
TVP23B-204ENST00000571018 KIAA1614Q5VZ46 1190 aa12.23□□□□□ -0.45
TVP23B-204ENST00000571018 STEAP4Q687X5 459 aa12.23□□□□□ -0.45
TVP23B-204ENST00000571018 CDHR3Q6ZTQ4 885 aa12.23□□□□□ -0.45
TVP23B-204ENST00000571018 KIAA0408Q6ZU52 694 aa12.23□□□□□ -0.45
TVP23B-204ENST00000571018 GALNT7Q86SF2 657 aa12.23□□□□□ -0.45
TVP23B-204ENST00000571018 TRIM73Q86UV7 250 aa12.23□□□□□ -0.45
TVP23B-204ENST00000571018 RAB42Q8N4Z0 105 aa12.23□□□□□ -0.45
TVP23B-204ENST00000571018 C19orf47Q8N9M1 422 aaKnown RBP12.23□□□□□ -0.45
TVP23B-204ENST00000571018 LSM14AQ8ND56 463 aaKnown RBP12.23□□□□□ -0.45
TVP23B-204ENST00000571018 GIMAP7Q8NHV1 300 aa12.23□□□□□ -0.45
TVP23B-204ENST00000571018 HMGCLL1Q8TB92 370 aa12.23□□□□□ -0.45
TVP23B-204ENST00000571018 TTC9Q92623 222 aa12.23□□□□□ -0.45
TVP23B-204ENST00000571018 INPP5DQ92835 1189 aa12.23□□□□□ -0.45
TVP23B-204ENST00000571018 RNF31Q96EP0 1072 aa12.23□□□□□ -0.45
TVP23B-204ENST00000571018 WBP1Q96G27 269 aa12.23□□□□□ -0.45
TVP23B-204ENST00000571018 CFAP36Q96G28 342 aa12.23□□□□□ -0.45
TVP23B-204ENST00000571018 TCTN2Q96GX1 697 aa12.23□□□□□ -0.45
TVP23B-204ENST00000571018 SLC45A3Q96JT2 553 aa12.23□□□□□ -0.45
TVP23B-204ENST00000571018 C16orf45Q96MC5 204 aaPredicted RBP12.23□□□□□ -0.45
TVP23B-204ENST00000571018 IL17FQ96PD4 163 aa12.23□□□□□ -0.45
TVP23B-204ENST00000571018 BBC3Q96PG8 261 aaPredicted RBP12.23□□□□□ -0.45
TVP23B-204ENST00000571018 GPR21Q99679 349 aa12.23□□□□□ -0.45
TVP23B-204ENST00000571018 SLC12A9Q9BXP2 914 aa12.23□□□□□ -0.45
TVP23B-204ENST00000571018 GPN2Q9H9Y4 310 aaPredicted RBP12.23□□□□□ -0.45
TVP23B-204ENST00000571018 FANCEQ9HB96 536 aa12.23□□□□□ -0.45
TVP23B-204ENST00000571018 FAM60AQ9NP50 221 aa12.23□□□□□ -0.45
TVP23B-204ENST00000571018 WHRNQ9P202 907 aa12.23□□□□□ -0.45
TVP23B-204ENST00000571018 CIDEBQ9UHD4 219 aa12.23□□□□□ -0.45
TVP23B-204ENST00000571018 PADI1Q9ULC6 663 aa12.23□□□□□ -0.45
TVP23B-204ENST00000571018 AHCTF1Q8WYP5 2266 aa12.22□□□□□ -0.45
TVP23B-204ENST00000571018 PRICKLE3O43900 615 aaPredicted RBP12.22□□□□□ -0.45
TVP23B-204ENST00000571018 VPS26AO75436 327 aa12.22□□□□□ -0.45
TVP23B-204ENST00000571018 SCRG1O75711 98 aa12.22□□□□□ -0.45
TVP23B-204ENST00000571018 AHSGP02765 367 aa12.22□□□□□ -0.45
TVP23B-204ENST00000571018 NTRK1P04629 796 aa12.22□□□□□ -0.45
TVP23B-204ENST00000571018 CCNYL3P0C7X3 344 aa12.22□□□□□ -0.45
TVP23B-204ENST00000571018 MPC1LP0DKB6 136 aa12.22□□□□□ -0.45
TVP23B-204ENST00000571018 CBSLP0DN79 551 aa12.22□□□□□ -0.45
TVP23B-204ENST00000571018 ENO3P13929 434 aaPredicted RBP12.22□□□□□ -0.45
TVP23B-204ENST00000571018 CBSP35520 551 aa12.22□□□□□ -0.45
TVP23B-204ENST00000571018 BDKRB1P46663 353 aa12.22□□□□□ -0.45
TVP23B-204ENST00000571018 GABRA4P48169 554 aa12.22□□□□□ -0.45
TVP23B-204ENST00000571018 CALCOCO2Q13137 446 aa12.22□□□□□ -0.45
TVP23B-204ENST00000571018 ZIC1Q15915 447 aa12.22□□□□□ -0.45
TVP23B-204ENST00000571018 DUPD1Q68J44 220 aa12.22□□□□□ -0.45
TVP23B-204ENST00000571018 TRMT10BQ6PF06 316 aaKnown RBP12.22□□□□□ -0.45
TVP23B-204ENST00000571018 PCSK4Q6UW60 755 aa12.22□□□□□ -0.45
TVP23B-204ENST00000571018 CYHR1Q6ZMK1 362 aa12.22□□□□□ -0.45
TVP23B-204ENST00000571018 TMEM126BQ8IUX1 230 aa12.22□□□□□ -0.45
TVP23B-204ENST00000571018 ANKMY2Q8IV38 441 aa12.22□□□□□ -0.45
TVP23B-204ENST00000571018 C2orf73Q8N5S3 287 aaPredicted RBP12.22□□□□□ -0.45
TVP23B-204ENST00000571018 LMNTD1Q8N9Z9 388 aa12.22□□□□□ -0.45
TVP23B-204ENST00000571018 FBXO36Q8NEA4 188 aa12.22□□□□□ -0.45
TVP23B-204ENST00000571018 OR1L3Q8NH93 324 aa12.22□□□□□ -0.45
TVP23B-204ENST00000571018 CD200R1Q8TD46 325 aa12.22□□□□□ -0.45
TVP23B-204ENST00000571018 DENND1AQ8TEH3 1009 aa12.22□□□□□ -0.45
TVP23B-204ENST00000571018 DPH5Q9H2P9 285 aa12.22□□□□□ -0.45
TVP23B-204ENST00000571018 PPANQ9NQ55 473 aaKnown RBP12.22□□□□□ -0.45
TVP23B-204ENST00000571018 LHX9Q9NQ69 397 aa12.22□□□□□ -0.45
TVP23B-204ENST00000571018 SPATA7Q9P0W8 599 aa12.22□□□□□ -0.45
TVP23B-204ENST00000571018 TSR3Q9UJK0 312 aaKnown RBP12.22□□□□□ -0.45
TVP23B-204ENST00000571018 SERTAD3Q9UJW9 196 aa12.22□□□□□ -0.45
TVP23B-204ENST00000571018 CDC23Q9UJX2 597 aa12.22□□□□□ -0.45
TVP23B-204ENST00000571018 PCDHB3Q9Y5E6 796 aa12.22□□□□□ -0.45
TVP23B-204ENST00000571018 CACNA1GO43497 2377 aa12.22□□□□□ -0.45
TVP23B-204ENST00000571018 ZFHX4Q86UP3 3567 aa12.21□□□□□ -0.45
TVP23B-204ENST00000571018 KRT87PA6NCN2 255 aa12.21□□□□□ -0.45
TVP23B-204ENST00000571018 ARHGEF33A8MVX0 844 aa12.21□□□□□ -0.45
TVP23B-204ENST00000571018 TMEM150CB9EJG8 249 aa12.21□□□□□ -0.45
TVP23B-204ENST00000571018 GFYI3L273 518 aa12.21□□□□□ -0.45
TVP23B-204ENST00000571018 EIF3FO00303 357 aaPredicted RBP12.21□□□□□ -0.45
TVP23B-204ENST00000571018 TERTO14746 1132 aaKnown RBP12.21□□□□□ -0.45
TVP23B-204ENST00000571018 CPNE3O75131 537 aaKnown RBP12.21□□□□□ -0.45
TVP23B-204ENST00000571018 FKBP9O95302 570 aa12.21□□□□□ -0.45
TVP23B-204ENST00000571018 CATP04040 527 aaKnown RBP12.21□□□□□ -0.45
TVP23B-204ENST00000571018 ITGB2P05107 769 aa12.21□□□□□ -0.45
TVP23B-204ENST00000571018 ERGP11308 486 aa12.21□□□□□ -0.45
TVP23B-204ENST00000571018 SKIV2L2P42285 1042 aaKnown RBP12.21□□□□□ -0.45
TVP23B-204ENST00000571018 TIAL1Q01085 375 aaKnown RBP eCLIP12.21□□□□□ -0.45
TVP23B-204ENST00000571018 CKAP4Q07065 602 aaKnown RBP12.21□□□□□ -0.45
TVP23B-204ENST00000571018 CUL1Q13616 776 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms