RNA–Protein interactions for RNA: ENST00000570273.5

HERPUD1-219, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 1 (best)

Gene HERPUD1, Length 1,425 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-219ENST00000570273 HSPA4LO95757 839 aa14.96□□□□□ -0.01
HERPUD1-219ENST00000570273 VIMP08670 466 aaKnown RBP14.96□□□□□ -0.01
HERPUD1-219ENST00000570273 XRCC1P18887 633 aaPredicted RBP14.96□□□□□ -0.01
HERPUD1-219ENST00000570273 PKLRP30613 574 aa14.96□□□□□ -0.01
HERPUD1-219ENST00000570273 GGT5P36269 586 aa14.96□□□□□ -0.01
HERPUD1-219ENST00000570273 SERPINB5P36952 375 aa14.96□□□□□ -0.01
HERPUD1-219ENST00000570273 GDF5P43026 501 aa14.96□□□□□ -0.01
HERPUD1-219ENST00000570273 CCR10P46092 362 aa14.96□□□□□ -0.01
HERPUD1-219ENST00000570273 SLC6A12P48065 614 aa14.96□□□□□ -0.01
HERPUD1-219ENST00000570273 SLC1A6P48664 564 aa14.96□□□□□ -0.01
HERPUD1-219ENST00000570273 MAZP56270 477 aaKnown RBP14.96□□□□□ -0.01
HERPUD1-219ENST00000570273 ABCE1P61221 599 aaKnown RBP14.96□□□□□ -0.01
HERPUD1-219ENST00000570273 NAA20P61599 178 aa14.96□□□□□ -0.01
HERPUD1-219ENST00000570273 PTCHD3Q3KNS1 767 aa14.96□□□□□ -0.01
HERPUD1-219ENST00000570273 SLC9B2Q86UD5 537 aa14.96□□□□□ -0.01
HERPUD1-219ENST00000570273 SNX31Q8N9S9 440 aa14.96□□□□□ -0.01
HERPUD1-219ENST00000570273 PPFIBP2Q8ND30 876 aa14.96□□□□□ -0.01
HERPUD1-219ENST00000570273 ZNF483Q8TF39 744 aaPredicted RBP14.96□□□□□ -0.01
HERPUD1-219ENST00000570273 JPH3Q8WXH2 748 aaPredicted RBP14.96□□□□□ -0.01
HERPUD1-219ENST00000570273 PYCR2Q96C36 320 aa14.96□□□□□ -0.01
HERPUD1-219ENST00000570273 NSUN5Q96P11 429 aaKnown RBP14.96□□□□□ -0.01
HERPUD1-219ENST00000570273 GTPBP2Q9BX10 602 aaKnown RBP14.96□□□□□ -0.01
HERPUD1-219ENST00000570273 PITPNM3Q9BZ71 974 aa14.96□□□□□ -0.01
HERPUD1-219ENST00000570273 IRF2BPLQ9H1B7 796 aa14.96□□□□□ -0.01
HERPUD1-219ENST00000570273 XKR8Q9H6D3 395 aa14.96□□□□□ -0.01
HERPUD1-219ENST00000570273 IL21RQ9HBE5 538 aa14.96□□□□□ -0.01
HERPUD1-219ENST00000570273 CACNA1EQ15878 2313 aa14.96□□□□□ -0.02
HERPUD1-219ENST00000570273 KNL1Q8NG31 2342 aa14.96□□□□□ -0.02
HERPUD1-219ENST00000570273 K7EPI3 171 aa14.95□□□□□ -0.02
HERPUD1-219ENST00000570273 ITM2AO43736 263 aa14.95□□□□□ -0.02
HERPUD1-219ENST00000570273 TSPAN8P19075 237 aa14.95□□□□□ -0.02
HERPUD1-219ENST00000570273 HSD17B2P37059 387 aa14.95□□□□□ -0.02
HERPUD1-219ENST00000570273 PIK3CGP48736 1102 aa14.95□□□□□ -0.02
HERPUD1-219ENST00000570273 RAB28P51157 221 aa14.95□□□□□ -0.02
HERPUD1-219ENST00000570273 CDH13P55290 713 aa14.95□□□□□ -0.02
HERPUD1-219ENST00000570273 TBPL1P62380 186 aa14.95□□□□□ -0.02
HERPUD1-219ENST00000570273 BIRC2Q13490 618 aa14.95□□□□□ -0.02
HERPUD1-219ENST00000570273 GTF2H2Q13888 395 aa14.95□□□□□ -0.02
HERPUD1-219ENST00000570273 ARHGAP19Q14CB8 494 aa14.95□□□□□ -0.02
HERPUD1-219ENST00000570273 PLCL1Q15111 1095 aa14.95□□□□□ -0.02
HERPUD1-219ENST00000570273 RBBP7Q16576 425 aa14.95□□□□□ -0.02
HERPUD1-219ENST00000570273 CYP2A13Q16696 494 aa14.95□□□□□ -0.02
HERPUD1-219ENST00000570273 TCEAL6Q6IPX3 200 aa14.95□□□□□ -0.02
HERPUD1-219ENST00000570273 GTF2H2CQ6P1K8 395 aa14.95□□□□□ -0.02
HERPUD1-219ENST00000570273 METTL2BQ6P1Q9 378 aaKnown RBP14.95□□□□□ -0.02
HERPUD1-219ENST00000570273 GOLGA7Q7Z5G4 137 aa14.95□□□□□ -0.02
HERPUD1-219ENST00000570273 GATAD2AQ86YP4 633 aa14.95□□□□□ -0.02
HERPUD1-219ENST00000570273 LRRC34Q8IZ02 419 aa14.95□□□□□ -0.02
HERPUD1-219ENST00000570273 TEX9Q8N6V9 391 aa14.95□□□□□ -0.02
HERPUD1-219ENST00000570273 LMNTD1Q8N9Z9 388 aa14.95□□□□□ -0.02
HERPUD1-219ENST00000570273 AVL9Q8NBF6 648 aa14.95□□□□□ -0.02
HERPUD1-219ENST00000570273 KYQ8NBH2 561 aa14.95□□□□□ -0.02
HERPUD1-219ENST00000570273 OR2I1PQ8NGU4 316 aa14.95□□□□□ -0.02
HERPUD1-219ENST00000570273 TRPC4APQ8TEL6 797 aa14.95□□□□□ -0.02
HERPUD1-219ENST00000570273 LCN9Q8WX39 176 aa14.95□□□□□ -0.02
HERPUD1-219ENST00000570273 TCEAL3Q969E4 200 aa14.95□□□□□ -0.02
HERPUD1-219ENST00000570273 CNDP1Q96KN2 507 aa14.95□□□□□ -0.02
HERPUD1-219ENST00000570273 TRMOQ9BU70 441 aa14.95□□□□□ -0.02
HERPUD1-219ENST00000570273 DRC3Q9H069 523 aa14.95□□□□□ -0.02
HERPUD1-219ENST00000570273 ZNF395Q9H8N7 513 aaPredicted RBP14.95□□□□□ -0.02
HERPUD1-219ENST00000570273 SLCO1B3Q9NPD5 702 aa14.95□□□□□ -0.02
HERPUD1-219ENST00000570273 CCDC177Q9NQR7 707 aaPredicted RBP14.95□□□□□ -0.02
HERPUD1-219ENST00000570273 ABCF3Q9NUQ8 709 aa14.95□□□□□ -0.02
HERPUD1-219ENST00000570273 DNAJC11Q9NVH1 559 aa14.95□□□□□ -0.02
HERPUD1-219ENST00000570273 THAP1Q9NVV9 213 aa14.95□□□□□ -0.02
HERPUD1-219ENST00000570273 ICKQ9UPZ9 632 aa14.95□□□□□ -0.02
HERPUD1-219ENST00000570273 WDR87Q6ZQQ6 2873 aa14.94□□□□□ -0.02
HERPUD1-219ENST00000570273 E2F3O00716 465 aa14.94□□□□□ -0.02
HERPUD1-219ENST00000570273 NOBOXO60393 691 aa14.94□□□□□ -0.02
HERPUD1-219ENST00000570273 SHOX2O60902 331 aaPredicted RBP14.94□□□□□ -0.02
HERPUD1-219ENST00000570273 SNNO75324 88 aaPredicted RBP14.94□□□□□ -0.02
HERPUD1-219ENST00000570273 CHRNGP07510 517 aa14.94□□□□□ -0.02
HERPUD1-219ENST00000570273 RETP07949 1114 aa14.94□□□□□ -0.02
HERPUD1-219ENST00000570273 ALPPL2P10696 532 aa14.94□□□□□ -0.02
HERPUD1-219ENST00000570273 ERGP11308 486 aa14.94□□□□□ -0.02
HERPUD1-219ENST00000570273 ENGP17813 658 aa14.94□□□□□ -0.02
HERPUD1-219ENST00000570273 ARRB2P32121 409 aa14.94□□□□□ -0.02
HERPUD1-219ENST00000570273 NBL1P41271 181 aa14.94□□□□□ -0.02
HERPUD1-219ENST00000570273 ATXN3P54252 364 aaPredicted RBP14.94□□□□□ -0.02
HERPUD1-219ENST00000570273 CBX1P83916 185 aa14.94□□□□□ -0.02
HERPUD1-219ENST00000570273 OCRLQ01968 901 aa14.94□□□□□ -0.02
HERPUD1-219ENST00000570273 NHLH1Q02575 133 aa14.94□□□□□ -0.02
HERPUD1-219ENST00000570273 HHEXQ03014 270 aa14.94□□□□□ -0.02
HERPUD1-219ENST00000570273 CLCQ05315 142 aa14.94□□□□□ -0.02
HERPUD1-219ENST00000570273 LCP2Q13094 533 aa14.94□□□□□ -0.02
HERPUD1-219ENST00000570273 FASTKQ14296 549 aaKnown RBP14.94□□□□□ -0.02
HERPUD1-219ENST00000570273 GPR18Q14330 331 aa14.94□□□□□ -0.02
HERPUD1-219ENST00000570273 ZXDCQ2QGD7 858 aaPredicted RBP14.94□□□□□ -0.02
HERPUD1-219ENST00000570273 ARL13AQ5H913 290 aaPredicted RBP14.94□□□□□ -0.02
HERPUD1-219ENST00000570273 C6orf132Q5T0Z8 1188 aa14.94□□□□□ -0.02
HERPUD1-219ENST00000570273 CAPN13Q6MZZ7 669 aaPredicted RBP14.94□□□□□ -0.02
HERPUD1-219ENST00000570273 RBM12BQ8IXT5 1001 aaKnown RBP14.94□□□□□ -0.02
HERPUD1-219ENST00000570273 KLHDC8AQ8IYD2 350 aa14.94□□□□□ -0.02
HERPUD1-219ENST00000570273 SLC25A45Q8N413 288 aa14.94□□□□□ -0.02
HERPUD1-219ENST00000570273 C2orf73Q8N5S3 287 aaPredicted RBP14.94□□□□□ -0.02
HERPUD1-219ENST00000570273 OR56A3Q8NH54 315 aa14.94□□□□□ -0.02
HERPUD1-219ENST00000570273 ATOH1Q92858 354 aaPredicted RBP14.94□□□□□ -0.02
HERPUD1-219ENST00000570273 CHMP6Q96FZ7 201 aa14.94□□□□□ -0.02
HERPUD1-219ENST00000570273 NRTNQ99748 197 aa14.94□□□□□ -0.02
HERPUD1-219ENST00000570273 MENTQ9BUN1 341 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms