RNA–Protein interactions for RNA: ENST00000569720.1

SPG7-221, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 909 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-221ENST00000569720 SLC6A19Q695T7 634 aa12.65□□□□□ -0.38
SPG7-221ENST00000569720 NAPRTQ6XQN6 538 aa12.65□□□□□ -0.38
SPG7-221ENST00000569720 NLRP9Q7RTR0 991 aa12.65□□□□□ -0.38
SPG7-221ENST00000569720 MRGPREQ86SM8 312 aa12.65□□□□□ -0.38
SPG7-221ENST00000569720 RASGEF1CQ8N431 466 aa12.65□□□□□ -0.38
SPG7-221ENST00000569720 ZNF655Q8N720 491 aaPredicted RBP12.65□□□□□ -0.38
SPG7-221ENST00000569720 RBMXL3Q8N7X1 1067 aaKnown RBP12.65□□□□□ -0.38
SPG7-221ENST00000569720 OR6P1Q8NGX9 317 aa12.65□□□□□ -0.38
SPG7-221ENST00000569720 OR4L1Q8NH43 312 aa12.65□□□□□ -0.38
SPG7-221ENST00000569720 DENND1AQ8TEH3 1009 aa12.65□□□□□ -0.38
SPG7-221ENST00000569720 SSC4DQ8WTU2 575 aa12.65□□□□□ -0.38
SPG7-221ENST00000569720 DLG3Q92796 817 aa12.65□□□□□ -0.38
SPG7-221ENST00000569720 HDAC10Q969S8 669 aa12.65□□□□□ -0.38
SPG7-221ENST00000569720 GBP5Q96PP8 586 aa12.65□□□□□ -0.38
SPG7-221ENST00000569720 OSBPL9Q96SU4 736 aa12.65□□□□□ -0.38
SPG7-221ENST00000569720 LUZP4Q9P127 313 aa12.65□□□□□ -0.38
SPG7-221ENST00000569720 ANAPC5Q9UJX4 755 aa12.65□□□□□ -0.38
SPG7-221ENST00000569720 RIMKLBQ9ULI2 386 aa12.65□□□□□ -0.38
SPG7-221ENST00000569720 PLAGL1Q9UM63 463 aa12.65□□□□□ -0.38
SPG7-221ENST00000569720 NUP210LQ5VU65 1888 aa12.65□□□□□ -0.38
SPG7-221ENST00000569720 BHMG1C9JSJ3 638 aaPredicted RBP12.64□□□□□ -0.39
SPG7-221ENST00000569720 H3BMH7 237 aa12.64□□□□□ -0.39
SPG7-221ENST00000569720 OR1I1O60431 355 aa12.64□□□□□ -0.39
SPG7-221ENST00000569720 IPO13O94829 963 aaKnown RBP12.64□□□□□ -0.39
SPG7-221ENST00000569720 GOT2P00505 430 aaKnown RBP12.64□□□□□ -0.39
SPG7-221ENST00000569720 IFNB1P01574 187 aa12.64□□□□□ -0.39
SPG7-221ENST00000569720 ATXN8OSP0DMR3 200 aa12.64□□□□□ -0.39
SPG7-221ENST00000569720 ADRA1DP25100 572 aa12.64□□□□□ -0.39
SPG7-221ENST00000569720 GABRA4P48169 554 aa12.64□□□□□ -0.39
SPG7-221ENST00000569720 RAB28P51157 221 aa12.64□□□□□ -0.39
SPG7-221ENST00000569720 CSE1LP55060 971 aaKnown RBP12.64□□□□□ -0.39
SPG7-221ENST00000569720 PRAMEP78395 509 aa12.64□□□□□ -0.39
SPG7-221ENST00000569720 CYP2A13Q16696 494 aa12.64□□□□□ -0.39
SPG7-221ENST00000569720 NKAIN1Q4KMZ8 207 aa12.64□□□□□ -0.39
SPG7-221ENST00000569720 AARS2Q5JTZ9 985 aaKnown RBP12.64□□□□□ -0.39
SPG7-221ENST00000569720 TSTD2Q5T7W7 516 aa12.64□□□□□ -0.39
SPG7-221ENST00000569720 IQCKQ8N0W5 287 aa12.64□□□□□ -0.39
SPG7-221ENST00000569720 GALNT16Q8N428 558 aa12.64□□□□□ -0.39
SPG7-221ENST00000569720 DNAJC22Q8N4W6 341 aa12.64□□□□□ -0.39
SPG7-221ENST00000569720 OR13J1Q8NGT2 312 aa12.64□□□□□ -0.39
SPG7-221ENST00000569720 OR2Y1Q8NGV0 311 aa12.64□□□□□ -0.39
SPG7-221ENST00000569720 FLVCR1-AS1Q8TAF5 88 aa12.64□□□□□ -0.39
SPG7-221ENST00000569720 ASZ1Q8WWH4 475 aa12.64□□□□□ -0.39
SPG7-221ENST00000569720 TM9SF4Q92544 642 aa12.64□□□□□ -0.39
SPG7-221ENST00000569720 SLC22A18Q96BI1 424 aa12.64□□□□□ -0.39
SPG7-221ENST00000569720 PTERQ96BW5 349 aa12.64□□□□□ -0.39
SPG7-221ENST00000569720 RANBP9Q96S59 729 aa12.64□□□□□ -0.39
SPG7-221ENST00000569720 CARD6Q9BX69 1037 aa12.64□□□□□ -0.39
SPG7-221ENST00000569720 ETNK1Q9HBU6 452 aa12.64□□□□□ -0.39
SPG7-221ENST00000569720 INTS7Q9NVH2 962 aaKnown RBP12.64□□□□□ -0.39
SPG7-221ENST00000569720 CUEDC1Q9NWM3 386 aaPredicted RBP12.64□□□□□ -0.39
SPG7-221ENST00000569720 CAMSAP3Q9P1Y5 1249 aaPredicted RBP12.64□□□□□ -0.39
SPG7-221ENST00000569720 DHCR7Q9UBM7 475 aaKnown RBP12.64□□□□□ -0.39
SPG7-221ENST00000569720 PCM1Q15154 2024 aa12.63□□□□□ -0.39
SPG7-221ENST00000569720 TCRBV7S2A1N4TA0A589 114 aa12.63□□□□□ -0.39
SPG7-221ENST00000569720 HCRTR1O43613 425 aa12.63□□□□□ -0.39
SPG7-221ENST00000569720 SUN1O94901 812 aa12.63□□□□□ -0.39
SPG7-221ENST00000569720 APOA4P06727 396 aa12.63□□□□□ -0.39
SPG7-221ENST00000569720 TPBGLP0DKB5 382 aa12.63□□□□□ -0.39
SPG7-221ENST00000569720 PIM1P11309 404 aaPredicted RBP12.63□□□□□ -0.39
SPG7-221ENST00000569720 ALAS2P22557 587 aa12.63□□□□□ -0.39
SPG7-221ENST00000569720 PKLRP30613 574 aa12.63□□□□□ -0.39
SPG7-221ENST00000569720 ARSFP54793 590 aa12.63□□□□□ -0.39
SPG7-221ENST00000569720 CKAP4Q07065 602 aaKnown RBP12.63□□□□□ -0.39
SPG7-221ENST00000569720 HSPA14Q0VDF9 509 aa12.63□□□□□ -0.39
SPG7-221ENST00000569720 MYBPC3Q14896 1274 aa12.63□□□□□ -0.39
SPG7-221ENST00000569720 SLC9A5Q14940 896 aa12.63□□□□□ -0.39
SPG7-221ENST00000569720 TMED2Q15363 201 aa12.63□□□□□ -0.39
SPG7-221ENST00000569720 PRR30Q53SZ7 412 aaPredicted RBP12.63□□□□□ -0.39
SPG7-221ENST00000569720 DCAF10Q5QP82 559 aa12.63□□□□□ -0.39
SPG7-221ENST00000569720 TTC23LQ6PF05 361 aa12.63□□□□□ -0.39
SPG7-221ENST00000569720 SLC22A15Q8IZD6 547 aa12.63□□□□□ -0.39
SPG7-221ENST00000569720 C17orf53Q8N3J3 647 aaPredicted RBP12.63□□□□□ -0.39
SPG7-221ENST00000569720 Q8NA96 180 aa12.63□□□□□ -0.39
SPG7-221ENST00000569720 GSDMBQ8TAX9 411 aa12.63□□□□□ -0.39
SPG7-221ENST00000569720 ATG4AQ8WYN0 398 aa12.63□□□□□ -0.39
SPG7-221ENST00000569720 PEX13Q92968 403 aa12.63□□□□□ -0.39
SPG7-221ENST00000569720 RUNDC3BQ96NL0 473 aa12.63□□□□□ -0.39
SPG7-221ENST00000569720 P4HTMQ9NXG6 502 aa12.63□□□□□ -0.39
SPG7-221ENST00000569720 EURLQ9NYK6 297 aa12.63□□□□□ -0.39
SPG7-221ENST00000569720 PLEKHB1Q9UF11 243 aaPredicted RBP12.63□□□□□ -0.39
SPG7-221ENST00000569720 CDC23Q9UJX2 597 aa12.63□□□□□ -0.39
SPG7-221ENST00000569720 SLC39A10Q9ULF5 831 aa12.63□□□□□ -0.39
SPG7-221ENST00000569720 ZNF148Q9UQR1 794 aa12.63□□□□□ -0.39
SPG7-221ENST00000569720 CDYLQ9Y232 598 aa12.63□□□□□ -0.39
SPG7-221ENST00000569720 PCSK5Q92824 1860 aa12.63□□□□□ -0.39
SPG7-221ENST00000569720 TEX15Q9BXT5 2789 aa12.63□□□□□ -0.39
SPG7-221ENST00000569720 GOLGA6L10A0A0M3HER8 536 aa12.62□□□□□ -0.39
SPG7-221ENST00000569720 TCP11X1B4DZS4 312 aa12.62□□□□□ -0.39
SPG7-221ENST00000569720 PGRMC1O00264 195 aaKnown RBP12.62□□□□□ -0.39
SPG7-221ENST00000569720 LIASO43766 372 aa12.62□□□□□ -0.39
SPG7-221ENST00000569720 DDAH2O95865 285 aa12.62□□□□□ -0.39
SPG7-221ENST00000569720 S1PR4O95977 384 aa12.62□□□□□ -0.39
SPG7-221ENST00000569720 MAGP20916 626 aa12.62□□□□□ -0.39
SPG7-221ENST00000569720 CD9P21926 228 aa12.62□□□□□ -0.39
SPG7-221ENST00000569720 PEBP1P30086 187 aaKnown RBP12.62□□□□□ -0.39
SPG7-221ENST00000569720 CCR7P32248 378 aa12.62□□□□□ -0.39
SPG7-221ENST00000569720 ACVR1Q04771 509 aa12.62□□□□□ -0.39
SPG7-221ENST00000569720 WHAMMP3Q1A5X7 153 aa12.62□□□□□ -0.39
SPG7-221ENST00000569720 EIF2S3LQ2VIR3 472 aaKnown RBP12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms