RNA–Protein interactions for RNA: ENST00000569245.5

COMMD4-225, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 867 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-225ENST00000569245 TRIT1Q9H3H1 467 aaKnown RBP14.05□□□□□ -0.16
COMMD4-225ENST00000569245 XKR8Q9H6D3 395 aa14.05□□□□□ -0.16
COMMD4-225ENST00000569245 PDE7BQ9NP56 450 aa14.05□□□□□ -0.16
COMMD4-225ENST00000569245 PSMC3IPQ9P2W1 217 aaPredicted RBP14.05□□□□□ -0.16
COMMD4-225ENST00000569245 LGALS13Q9UHV8 139 aa14.05□□□□□ -0.16
COMMD4-225ENST00000569245 TDRKHQ9Y2W6 561 aaKnown RBP14.05□□□□□ -0.16
COMMD4-225ENST00000569245 GOLGA6L10A6NI86 522 aa14.04□□□□□ -0.16
COMMD4-225ENST00000569245 IQCF5A8MTL0 148 aa14.04□□□□□ -0.16
COMMD4-225ENST00000569245 GOLGA8KD6RF30 607 aa14.04□□□□□ -0.16
COMMD4-225ENST00000569245 GOLGA8TH3BQL2 631 aa14.04□□□□□ -0.16
COMMD4-225ENST00000569245 MATN2O00339 956 aa14.04□□□□□ -0.16
COMMD4-225ENST00000569245 PRMT5O14744 637 aaPredicted RBP14.04□□□□□ -0.16
COMMD4-225ENST00000569245 PFDN6O15212 129 aa14.04□□□□□ -0.16
COMMD4-225ENST00000569245 ATXN7O15265 892 aaPredicted RBP14.04□□□□□ -0.16
COMMD4-225ENST00000569245 MAP3K7O43318 606 aa14.04□□□□□ -0.16
COMMD4-225ENST00000569245 PIAS1O75925 651 aa14.04□□□□□ -0.16
COMMD4-225ENST00000569245 ZBTB11O95625 1053 aaPredicted RBP14.04□□□□□ -0.16
COMMD4-225ENST00000569245 MYZAPP0CAP1 466 aa14.04□□□□□ -0.16
COMMD4-225ENST00000569245 EBLN1P0CF75 366 aa14.04□□□□□ -0.16
COMMD4-225ENST00000569245 LIFP15018 202 aa14.04□□□□□ -0.16
COMMD4-225ENST00000569245 FOLR1P15328 257 aa14.04□□□□□ -0.16
COMMD4-225ENST00000569245 CDH3P22223 829 aa14.04□□□□□ -0.16
COMMD4-225ENST00000569245 CCR7P32248 378 aa14.04□□□□□ -0.16
COMMD4-225ENST00000569245 GP5P40197 560 aa14.04□□□□□ -0.16
COMMD4-225ENST00000569245 SLC1A2P43004 574 aa14.04□□□□□ -0.16
COMMD4-225ENST00000569245 SLCO1A2P46721 670 aa14.04□□□□□ -0.16
COMMD4-225ENST00000569245 SERPINB9P50453 376 aa14.04□□□□□ -0.16
COMMD4-225ENST00000569245 KPNA2P52292 529 aaKnown RBP14.04□□□□□ -0.16
COMMD4-225ENST00000569245 ILF2Q12905 390 aaKnown RBP14.04□□□□□ -0.16
COMMD4-225ENST00000569245 TUBB3Q13509 450 aa14.04□□□□□ -0.16
COMMD4-225ENST00000569245 TMTC4Q5T4D3 741 aa14.04□□□□□ -0.16
COMMD4-225ENST00000569245 GRTP1Q5TC63 336 aa14.04□□□□□ -0.16
COMMD4-225ENST00000569245 ZNF470Q6ECI4 717 aa14.04□□□□□ -0.16
COMMD4-225ENST00000569245 PPP1R3BQ86XI6 285 aa14.04□□□□□ -0.16
COMMD4-225ENST00000569245 KMT5CQ86Y97 462 aa14.04□□□□□ -0.16
COMMD4-225ENST00000569245 CILP2Q8IUL8 1156 aa14.04□□□□□ -0.16
COMMD4-225ENST00000569245 OR5AR1Q8NGP9 310 aa14.04□□□□□ -0.16
COMMD4-225ENST00000569245 ASZ1Q8WWH4 475 aa14.04□□□□□ -0.16
COMMD4-225ENST00000569245 SLC39A7Q92504 469 aa14.04□□□□□ -0.16
COMMD4-225ENST00000569245 PGM2Q96G03 612 aa14.04□□□□□ -0.16
COMMD4-225ENST00000569245 SLC41A2Q96JW4 573 aa14.04□□□□□ -0.16
COMMD4-225ENST00000569245 TCF12Q99081 682 aa14.04□□□□□ -0.16
COMMD4-225ENST00000569245 MCMBPQ9BTE3 642 aa14.04□□□□□ -0.16
COMMD4-225ENST00000569245 TFB2MQ9H5Q4 396 aaKnown RBP14.04□□□□□ -0.16
COMMD4-225ENST00000569245 GPN2Q9H9Y4 310 aaPredicted RBP14.04□□□□□ -0.16
COMMD4-225ENST00000569245 TMBIM4Q9HC24 238 aa14.04□□□□□ -0.16
COMMD4-225ENST00000569245 SOHLH2Q9NX45 425 aa14.04□□□□□ -0.16
COMMD4-225ENST00000569245 LNPEPQ9UIQ6 1025 aa14.04□□□□□ -0.16
COMMD4-225ENST00000569245 GNPTGQ9UJJ9 305 aa14.04□□□□□ -0.16
COMMD4-225ENST00000569245 FBXO5Q9UKT4 447 aa14.04□□□□□ -0.16
COMMD4-225ENST00000569245 RARRES3Q9UL19 164 aa14.04□□□□□ -0.16
COMMD4-225ENST00000569245 PCDHGA4Q9Y5G9 962 aa14.04□□□□□ -0.16
COMMD4-225ENST00000569245 IKBKGQ9Y6K9 419 aa14.04□□□□□ -0.16
COMMD4-225ENST00000569245 SLC5A10A0PJK1 596 aa14.03□□□□□ -0.16
COMMD4-225ENST00000569245 TLDC2A0PJX2 215 aa14.03□□□□□ -0.16
COMMD4-225ENST00000569245 BTN3A3O00478 584 aa14.03□□□□□ -0.16
COMMD4-225ENST00000569245 BTN3A1O00481 513 aa14.03□□□□□ -0.16
COMMD4-225ENST00000569245 APOA4P06727 396 aa14.03□□□□□ -0.16
COMMD4-225ENST00000569245 ZNF28P17035 718 aa14.03□□□□□ -0.16
COMMD4-225ENST00000569245 CNTFP26441 200 aa14.03□□□□□ -0.16
COMMD4-225ENST00000569245 ACY1Q03154 408 aa14.03□□□□□ -0.16
COMMD4-225ENST00000569245 ABRQ12979 859 aa14.03□□□□□ -0.16
COMMD4-225ENST00000569245 TMED2Q15363 201 aa14.03□□□□□ -0.16
COMMD4-225ENST00000569245 TYSND1Q2T9J0 566 aa14.03□□□□□ -0.16
COMMD4-225ENST00000569245 TNFAIP8L3Q5GJ75 292 aa14.03□□□□□ -0.16
COMMD4-225ENST00000569245 LGSNQ5TDP6 509 aa14.03□□□□□ -0.16
COMMD4-225ENST00000569245 C6orf15Q6UXA7 325 aaPredicted RBP14.03□□□□□ -0.16
COMMD4-225ENST00000569245 TIPARPQ7Z3E1 657 aaKnown RBP14.03□□□□□ -0.16
COMMD4-225ENST00000569245 DENND6AQ8IWF6 608 aa14.03□□□□□ -0.16
COMMD4-225ENST00000569245 TBC1D21Q8IYX1 336 aa14.03□□□□□ -0.16
COMMD4-225ENST00000569245 KRT222Q8N1A0 295 aa14.03□□□□□ -0.16
COMMD4-225ENST00000569245 ESX1Q8N693 406 aa14.03□□□□□ -0.16
COMMD4-225ENST00000569245 CFAP61Q8NHU2 1237 aa14.03□□□□□ -0.16
COMMD4-225ENST00000569245 NRTNQ99748 197 aa14.03□□□□□ -0.16
COMMD4-225ENST00000569245 SEMA5BQ9P283 1151 aa14.03□□□□□ -0.16
COMMD4-225ENST00000569245 TXNDC16Q9P2K2 825 aa14.03□□□□□ -0.16
COMMD4-225ENST00000569245 SLC17A6Q9P2U8 582 aa14.03□□□□□ -0.16
COMMD4-225ENST00000569245 POLG2Q9UHN1 485 aa14.03□□□□□ -0.16
COMMD4-225ENST00000569245 TMEM184BQ9Y519 407 aaPredicted RBP14.03□□□□□ -0.16
COMMD4-225ENST00000569245 PSAT1Q9Y617 370 aa14.03□□□□□ -0.16
COMMD4-225ENST00000569245 ATMQ13315 3056 aa14.02□□□□□ -0.16
COMMD4-225ENST00000569245 IQANK1A0A1B0GTG1 560 aa14.02□□□□□ -0.17
COMMD4-225ENST00000569245 SLC9B1P1A6NJY1 282 aa14.02□□□□□ -0.17
COMMD4-225ENST00000569245 SMIM23A6NLE4 172 aa14.02□□□□□ -0.17
COMMD4-225ENST00000569245 C2orf74A8MZ97 194 aa14.02□□□□□ -0.17
COMMD4-225ENST00000569245 RGS16O15492 202 aaPredicted RBP14.02□□□□□ -0.17
COMMD4-225ENST00000569245 KDM1AO60341 852 aa14.02□□□□□ -0.17
COMMD4-225ENST00000569245 KRT38O76015 456 aa14.02□□□□□ -0.17
COMMD4-225ENST00000569245 KIAA0754O94854 1291 aa14.02□□□□□ -0.17
COMMD4-225ENST00000569245 SYF2O95926 243 aaKnown RBP14.02□□□□□ -0.17
COMMD4-225ENST00000569245 S1PR4O95977 384 aa14.02□□□□□ -0.17
COMMD4-225ENST00000569245 AHSGP02765 367 aa14.02□□□□□ -0.17
COMMD4-225ENST00000569245 CCNYL3P0C7X3 344 aa14.02□□□□□ -0.17
COMMD4-225ENST00000569245 FGF5P12034 268 aa14.02□□□□□ -0.17
COMMD4-225ENST00000569245 WT1P19544 449 aaPredicted RBP14.02□□□□□ -0.17
COMMD4-225ENST00000569245 ACADLP28330 430 aa14.02□□□□□ -0.17
COMMD4-225ENST00000569245 GABRB3P28472 473 aa14.02□□□□□ -0.17
COMMD4-225ENST00000569245 PRDX3P30048 256 aaKnown RBP14.02□□□□□ -0.17
COMMD4-225ENST00000569245 FMO4P31512 558 aa14.02□□□□□ -0.17
COMMD4-225ENST00000569245 SHMT2P34897 504 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms