RNA–Protein interactions for RNA: ENST00000566635.5

HERC2-208, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 2, humanhuman

TSL 1 (best)

Gene HERC2, Length 2,114 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2-208ENST00000566635 CCDC22O60826 627 aa17.18■□□□□ 0.34
HERC2-208ENST00000566635 CBX6O95503 412 aa17.18■□□□□ 0.34
HERC2-208ENST00000566635 EML2O95834 649 aa17.18■□□□□ 0.34
HERC2-208ENST00000566635 LINC00032P0C843 101 aa17.18■□□□□ 0.34
HERC2-208ENST00000566635 NCF2P19878 526 aaPredicted RBP17.18■□□□□ 0.34
HERC2-208ENST00000566635 IDSP22304 550 aa17.18■□□□□ 0.34
HERC2-208ENST00000566635 FASTKQ14296 549 aaKnown RBP17.18■□□□□ 0.34
HERC2-208ENST00000566635 ZNF542PQ5EBM4 170 aa17.18■□□□□ 0.34
HERC2-208ENST00000566635 TTC23LQ6PF05 361 aa17.18■□□□□ 0.34
HERC2-208ENST00000566635 MYLK4Q86YV6 388 aaPredicted RBP17.18■□□□□ 0.34
HERC2-208ENST00000566635 TREML1Q86YW5 311 aa17.18■□□□□ 0.34
HERC2-208ENST00000566635 SYTL1Q8IYJ3 562 aa17.18■□□□□ 0.34
HERC2-208ENST00000566635 METTL6Q8TCB7 284 aa17.18■□□□□ 0.34
HERC2-208ENST00000566635 STON2Q8WXE9 905 aa17.18■□□□□ 0.34
HERC2-208ENST00000566635 SPACA7Q96KW9 195 aa17.18■□□□□ 0.34
HERC2-208ENST00000566635 OR4K3Q96R72 315 aa17.18■□□□□ 0.34
HERC2-208ENST00000566635 NTMT1Q9BV86 223 aa17.18■□□□□ 0.34
HERC2-208ENST00000566635 NUSAP1Q9BXS6 441 aaKnown RBP17.18■□□□□ 0.34
HERC2-208ENST00000566635 TCEAL2Q9H3H9 227 aaPredicted RBP17.18■□□□□ 0.34
HERC2-208ENST00000566635 SPATA6Q9NWH7 488 aaPredicted RBP17.18■□□□□ 0.34
HERC2-208ENST00000566635 SCHIP1Q9P0W5 487 aaPredicted RBP17.18■□□□□ 0.34
HERC2-208ENST00000566635 FANCMQ8IYD8 2048 aa17.17■□□□□ 0.34
HERC2-208ENST00000566635 TOR1BO14657 336 aa17.17■□□□□ 0.34
HERC2-208ENST00000566635 FFAR3O14843 346 aa17.17■□□□□ 0.34
HERC2-208ENST00000566635 GPR42O15529 346 aa17.17■□□□□ 0.34
HERC2-208ENST00000566635 PRAMEF4O60810 478 aa17.17■□□□□ 0.34
HERC2-208ENST00000566635 KCNJ13O60928 360 aa17.17■□□□□ 0.34
HERC2-208ENST00000566635 CD27P26842 260 aa17.17■□□□□ 0.34
HERC2-208ENST00000566635 EIF2B5Q13144 721 aaKnown RBP17.17■□□□□ 0.34
HERC2-208ENST00000566635 TSTA3Q13630 321 aaPredicted RBP17.17■□□□□ 0.34
HERC2-208ENST00000566635 PRAMEF9Q5VWM5 478 aa17.17■□□□□ 0.34
HERC2-208ENST00000566635 SLC30A9Q6PML9 568 aa17.17■□□□□ 0.34
HERC2-208ENST00000566635 KLHDC8AQ8IYD2 350 aa17.17■□□□□ 0.34
HERC2-208ENST00000566635 GBP7Q8N8V2 638 aaPredicted RBP17.17■□□□□ 0.34
HERC2-208ENST00000566635 RAD51AP1Q96B01 352 aa17.17■□□□□ 0.34
HERC2-208ENST00000566635 HSPA12BQ96MM6 686 aa17.17■□□□□ 0.34
HERC2-208ENST00000566635 CATSPER2Q96P56 530 aa17.17■□□□□ 0.34
HERC2-208ENST00000566635 HBEGFQ99075 208 aa17.17■□□□□ 0.34
HERC2-208ENST00000566635 CCDC106Q9BWC9 280 aa17.17■□□□□ 0.34
HERC2-208ENST00000566635 ACTR8Q9H981 624 aa17.17■□□□□ 0.34
HERC2-208ENST00000566635 TBC1D29Q9UFV1 150 aa17.17■□□□□ 0.34
HERC2-208ENST00000566635 HGFP14210 728 aa17.17■□□□□ 0.34
HERC2-208ENST00000566635 BNIP1Q12981 228 aa17.17■□□□□ 0.34
HERC2-208ENST00000566635 CDC16Q13042 620 aa17.17■□□□□ 0.34
HERC2-208ENST00000566635 FZD2Q14332 565 aa17.17■□□□□ 0.34
HERC2-208ENST00000566635 LACTB2Q53H82 288 aaPredicted RBP17.17■□□□□ 0.34
HERC2-208ENST00000566635 LRRC56Q8IYG6 542 aaPredicted RBP17.17■□□□□ 0.34
HERC2-208ENST00000566635 CADM4Q8NFZ8 388 aa17.17■□□□□ 0.34
HERC2-208ENST00000566635 MAGEC3Q8TD91 643 aa17.17■□□□□ 0.34
HERC2-208ENST00000566635 ACTRT2Q8TDY3 377 aa17.17■□□□□ 0.34
HERC2-208ENST00000566635 FERD3LQ96RJ6 166 aa17.17■□□□□ 0.34
HERC2-208ENST00000566635 IER2Q9BTL4 223 aa17.17■□□□□ 0.34
HERC2-208ENST00000566635 TRIT1Q9H3H1 467 aaKnown RBP17.17■□□□□ 0.34
HERC2-208ENST00000566635 ARL8BQ9NVJ2 186 aa17.17■□□□□ 0.34
HERC2-208ENST00000566635 TRPS1Q9UHF7 1281 aa17.17■□□□□ 0.34
HERC2-208ENST00000566635 KLF15Q9UIH9 416 aa17.17■□□□□ 0.34
HERC2-208ENST00000566635 TECTAO75443 2155 aa17.16■□□□□ 0.34
HERC2-208ENST00000566635 ABCA7Q8IZY2 2146 aa17.16■□□□□ 0.34
HERC2-208ENST00000566635 PRAMEF33A0A0G2JMD5 474 aa17.16■□□□□ 0.34
HERC2-208ENST00000566635 SPTY2D1-AS1A0A0U1RR47 76 aa17.16■□□□□ 0.34
HERC2-208ENST00000566635 MEI4A8MW99 385 aa17.16■□□□□ 0.34
HERC2-208ENST00000566635 PRR5-ARHGAP8B1AHC4 643 aa17.16■□□□□ 0.34
HERC2-208ENST00000566635 E7EQ34 232 aa17.16■□□□□ 0.34
HERC2-208ENST00000566635 WNT1P04628 370 aa17.16■□□□□ 0.34
HERC2-208ENST00000566635 RPN2P04844 631 aa17.16■□□□□ 0.34
HERC2-208ENST00000566635 EBLN1P0CF75 366 aa17.16■□□□□ 0.34
HERC2-208ENST00000566635 ACTR1BP42025 376 aa17.16■□□□□ 0.34
HERC2-208ENST00000566635 PNLIPRP1P54315 467 aa17.16■□□□□ 0.34
HERC2-208ENST00000566635 ACTR1AP61163 376 aa17.16■□□□□ 0.34
HERC2-208ENST00000566635 UAP1L1Q3KQV9 507 aa17.16■□□□□ 0.34
HERC2-208ENST00000566635 USP39Q53GS9 565 aaKnown RBP17.16■□□□□ 0.34
HERC2-208ENST00000566635 SUSD1Q6UWL2 747 aa17.16■□□□□ 0.34
HERC2-208ENST00000566635 C2orf73Q8N5S3 287 aaPredicted RBP17.16■□□□□ 0.34
HERC2-208ENST00000566635 EDAQ92838 391 aa17.16■□□□□ 0.34
HERC2-208ENST00000566635 POLG2Q9UHN1 485 aa17.16■□□□□ 0.34
HERC2-208ENST00000566635 SLC12A4Q9UP95 1085 aa17.16■□□□□ 0.34
HERC2-208ENST00000566635 SH2B3Q9UQQ2 575 aa17.16■□□□□ 0.34
HERC2-208ENST00000566635 CACNA1IQ9P0X4 2223 aa17.16■□□□□ 0.34
HERC2-208ENST00000566635 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa17.15■□□□□ 0.34
HERC2-208ENST00000566635 CAPN14A8MX76 684 aa17.15■□□□□ 0.34
HERC2-208ENST00000566635 DCXO43602 365 aa17.15■□□□□ 0.34
HERC2-208ENST00000566635 CLDN9O95484 217 aa17.15■□□□□ 0.34
HERC2-208ENST00000566635 CHEK2O96017 543 aa17.15■□□□□ 0.34
HERC2-208ENST00000566635 ENO1P06733 434 aaKnown RBP17.15■□□□□ 0.34
HERC2-208ENST00000566635 HMOX2P30519 316 aa17.15■□□□□ 0.34
HERC2-208ENST00000566635 LRP8Q14114 963 aa17.15■□□□□ 0.34
HERC2-208ENST00000566635 PTK2BQ14289 1009 aa17.15■□□□□ 0.34
HERC2-208ENST00000566635 LARP4Q71RC2 724 aaKnown RBP eCLIP17.15■□□□□ 0.34
HERC2-208ENST00000566635 TMEFF1Q8IYR6 380 aa17.15■□□□□ 0.34
HERC2-208ENST00000566635 OR2T11Q8NH01 316 aa17.15■□□□□ 0.34
HERC2-208ENST00000566635 CEP70Q8NHQ1 597 aa17.15■□□□□ 0.34
HERC2-208ENST00000566635 KLHDC7BQ96G42 594 aa17.15■□□□□ 0.34
HERC2-208ENST00000566635 MENTQ9BUN1 341 aa17.15■□□□□ 0.34
HERC2-208ENST00000566635 MIR1-1HGQ9H1L0 117 aa17.15■□□□□ 0.34
HERC2-208ENST00000566635 AKTIPQ9H8T0 292 aa17.15■□□□□ 0.34
HERC2-208ENST00000566635 DGKBQ9Y6T7 804 aa17.15■□□□□ 0.34
HERC2-208ENST00000566635 BDP1A6H8Y1 2624 aa17.15■□□□□ 0.34
HERC2-208ENST00000566635 E7ENX8 843 aa17.15■□□□□ 0.34
HERC2-208ENST00000566635 CELA2BP08218 269 aaPredicted RBP17.15■□□□□ 0.34
HERC2-208ENST00000566635 T-ENOLP0DO92 83 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms