RNA–Protein interactions for RNA: ENST00000566328.2

SMG1-212, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-212ENST00000566328 INTS11Q5TA45 600 aaKnown RBP1.71□□□□□ -2.14
SMG1-212ENST00000566328 RNLSQ5VYX0 342 aa1.71□□□□□ -2.14
SMG1-212ENST00000566328 CYP20A1Q6UW02 462 aa1.71□□□□□ -2.14
SMG1-212ENST00000566328 LCLAT1Q6UWP7 414 aa1.71□□□□□ -2.14
SMG1-212ENST00000566328 CYP26C1Q6V0L0 522 aa1.71□□□□□ -2.14
SMG1-212ENST00000566328 TMEM139Q8IV31 216 aa1.71□□□□□ -2.14
SMG1-212ENST00000566328 CDK20Q8IZL9 346 aa1.71□□□□□ -2.14
SMG1-212ENST00000566328 EID3Q8N140 333 aa1.71□□□□□ -2.14
SMG1-212ENST00000566328 TRIML1Q8N9V2 468 aa1.71□□□□□ -2.14
SMG1-212ENST00000566328 OR13J1Q8NGT2 312 aa1.71□□□□□ -2.14
SMG1-212ENST00000566328 OR52N5Q8NH56 324 aa1.71□□□□□ -2.14
SMG1-212ENST00000566328 OR1L3Q8NH93 324 aa1.71□□□□□ -2.14
SMG1-212ENST00000566328 ETNPPLQ8TBG4 499 aa1.71□□□□□ -2.14
SMG1-212ENST00000566328 IRGQQ8WZA9 623 aa1.71□□□□□ -2.14
SMG1-212ENST00000566328 ATXN7L3BQ96GX2 97 aa1.71□□□□□ -2.14
SMG1-212ENST00000566328 RPS6KC1Q96S38 1066 aa1.71□□□□□ -2.14
SMG1-212ENST00000566328 TDRD1Q9BXT4 1180 aaKnown RBP1.71□□□□□ -2.14
SMG1-212ENST00000566328 OR2B2Q9GZK3 357 aa1.71□□□□□ -2.14
SMG1-212ENST00000566328 MIS12Q9H081 205 aa1.71□□□□□ -2.14
SMG1-212ENST00000566328 S1PR5Q9H228 398 aa1.71□□□□□ -2.14
SMG1-212ENST00000566328 DNAJC18Q9H819 358 aa1.71□□□□□ -2.14
SMG1-212ENST00000566328 POLR1BQ9H9Y6 1135 aa1.71□□□□□ -2.14
SMG1-212ENST00000566328 EHD2Q9NZN4 543 aa1.71□□□□□ -2.14
SMG1-212ENST00000566328 SLC13A4Q9UKG4 626 aa1.71□□□□□ -2.14
SMG1-212ENST00000566328 ARHGAP26Q9UNA1 814 aa1.71□□□□□ -2.14
SMG1-212ENST00000566328 ERCC6L2Q5T890 1561 aa1.71□□□□□ -2.14
SMG1-212ENST00000566328 SNAPC4Q5SXM2 1469 aa1.7□□□□□ -2.14
SMG1-212ENST00000566328 IFT140Q96RY7 1462 aa1.7□□□□□ -2.14
SMG1-212ENST00000566328 RIMBP3CA6NJZ7 1639 aa1.7□□□□□ -2.14
SMG1-212ENST00000566328 RIMBP3BA6NNM3 1639 aa1.7□□□□□ -2.14
SMG1-212ENST00000566328 RIMBP3Q9UFD9 1639 aa1.7□□□□□ -2.14
SMG1-212ENST00000566328 TRIOBPQ9H2D6 2365 aa1.7□□□□□ -2.14
SMG1-212ENST00000566328 IGHV4-30-2A0A087WSY4 118 aa1.7□□□□□ -2.14
SMG1-212ENST00000566328 HYKKA2RU49 373 aa1.7□□□□□ -2.14
SMG1-212ENST00000566328 SHISA7A6NL88 538 aa1.7□□□□□ -2.14
SMG1-212ENST00000566328 TO15178 435 aa1.7□□□□□ -2.14
SMG1-212ENST00000566328 SSX4O60224 188 aa1.7□□□□□ -2.14
SMG1-212ENST00000566328 LY6G6DO95868 133 aa1.7□□□□□ -2.14
SMG1-212ENST00000566328 PRKAR1AP10644 381 aa1.7□□□□□ -2.14
SMG1-212ENST00000566328 ETV5P41161 510 aa1.7□□□□□ -2.14
SMG1-212ENST00000566328 HNRNPA3P51991 378 aaKnown RBP1.7□□□□□ -2.14
SMG1-212ENST00000566328 EIF4A2Q14240 407 aaKnown RBP1.7□□□□□ -2.14
SMG1-212ENST00000566328 SQLEQ14534 574 aa1.7□□□□□ -2.14
SMG1-212ENST00000566328 MTF1Q14872 753 aa1.7□□□□□ -2.14
SMG1-212ENST00000566328 ITPRIPL2Q3MIP1 535 aa1.7□□□□□ -2.14
SMG1-212ENST00000566328 ZER1Q7Z7L7 766 aa1.7□□□□□ -2.14
SMG1-212ENST00000566328 COMMD2Q86X83 199 aa1.7□□□□□ -2.14
SMG1-212ENST00000566328 CATSPERDQ86XM0 798 aa1.7□□□□□ -2.14
SMG1-212ENST00000566328 POC5Q8NA72 575 aa1.7□□□□□ -2.14
SMG1-212ENST00000566328 HJURPQ8NCD3 748 aaPredicted RBP1.7□□□□□ -2.14
SMG1-212ENST00000566328 C9orf43Q8TAL5 461 aaPredicted RBP1.7□□□□□ -2.14
SMG1-212ENST00000566328 C11orf45Q8TAV5 145 aa1.7□□□□□ -2.14
SMG1-212ENST00000566328 CCDC107Q8WV48 283 aa1.7□□□□□ -2.14
SMG1-212ENST00000566328 ZNF597Q96LX8 424 aa1.7□□□□□ -2.14
SMG1-212ENST00000566328 GAD1Q99259 594 aa1.7□□□□□ -2.14
SMG1-212ENST00000566328 LCE3DQ9BYE3 92 aa1.7□□□□□ -2.14
SMG1-212ENST00000566328 HOXD1Q9GZZ0 328 aa1.7□□□□□ -2.14
SMG1-212ENST00000566328 PAIP1Q9H074 479 aaKnown RBP1.7□□□□□ -2.14
SMG1-212ENST00000566328 C19orf25Q9UFG5 118 aaPredicted RBP1.7□□□□□ -2.14
SMG1-212ENST00000566328 IKZF3Q9UKT9 509 aa1.7□□□□□ -2.14
SMG1-212ENST00000566328 MTUS1Q9ULD2 1270 aa1.7□□□□□ -2.14
SMG1-212ENST00000566328 PCDHGA5Q9Y5G8 931 aa1.7□□□□□ -2.14
SMG1-212ENST00000566328 KCNE2Q9Y6J6 123 aa1.7□□□□□ -2.14
SMG1-212ENST00000566328 STYXL1Q9Y6J8 313 aa1.7□□□□□ -2.14
SMG1-212ENST00000566328 MUC19Q7Z5P9 8384 aa1.7□□□□□ -2.14
SMG1-212ENST00000566328 ARHGEF11O15085 1522 aa1.7□□□□□ -2.14
SMG1-212ENST00000566328 TARBP1Q13395 1621 aaKnown RBP1.69□□□□□ -2.14
SMG1-212ENST00000566328 GAPVD1Q14C86 1478 aa1.69□□□□□ -2.14
SMG1-212ENST00000566328 ARAP1Q96P48 1450 aa1.69□□□□□ -2.14
SMG1-212ENST00000566328 UMODL1Q5DID0 1318 aa1.69□□□□□ -2.14
SMG1-212ENST00000566328 FAM205AQ6ZU69 1335 aa1.69□□□□□ -2.14
SMG1-212ENST00000566328 CHD1O14646 1710 aa1.69□□□□□ -2.14
SMG1-212ENST00000566328 FAM237BA0A1B0GVD1 139 aa1.69□□□□□ -2.14
SMG1-212ENST00000566328 OGTO15294 1046 aa1.69□□□□□ -2.14
SMG1-212ENST00000566328 LRCH4O75427 683 aa1.69□□□□□ -2.14
SMG1-212ENST00000566328 KRT6AP02538 564 aa1.69□□□□□ -2.14
SMG1-212ENST00000566328 KRT6BP04259 564 aa1.69□□□□□ -2.14
SMG1-212ENST00000566328 CDH3P22223 829 aa1.69□□□□□ -2.14
SMG1-212ENST00000566328 CCT5P48643 541 aa1.69□□□□□ -2.14
SMG1-212ENST00000566328 KRT6CP48668 564 aa1.69□□□□□ -2.14
SMG1-212ENST00000566328 CSNK2BP67870 215 aa1.69□□□□□ -2.14
SMG1-212ENST00000566328 MELKQ14680 651 aa1.69□□□□□ -2.14
SMG1-212ENST00000566328 GRAMD1BQ3KR37 738 aa1.69□□□□□ -2.14
SMG1-212ENST00000566328 SLC25A53Q5H9E4 307 aa1.69□□□□□ -2.14
SMG1-212ENST00000566328 CCBE1Q6UXH8 406 aaPredicted RBP1.69□□□□□ -2.14
SMG1-212ENST00000566328 TIPARPQ7Z3E1 657 aaKnown RBP1.69□□□□□ -2.14
SMG1-212ENST00000566328 FAM114A1Q8IWE2 563 aa1.69□□□□□ -2.14
SMG1-212ENST00000566328 CFAP206Q8IYR0 622 aa1.69□□□□□ -2.14
SMG1-212ENST00000566328 PRR22Q8IZ63 422 aa1.69□□□□□ -2.14
SMG1-212ENST00000566328 CD177Q8N6Q3 437 aa1.69□□□□□ -2.14
SMG1-212ENST00000566328 PAPD5Q8NDF8 572 aaKnown RBP1.69□□□□□ -2.14
SMG1-212ENST00000566328 OR5T2Q8NGG2 359 aa1.69□□□□□ -2.14
SMG1-212ENST00000566328 MOSPD2Q8NHP6 518 aa1.69□□□□□ -2.14
SMG1-212ENST00000566328 ARHGEF2Q92974 986 aaKnown RBP1.69□□□□□ -2.14
SMG1-212ENST00000566328 ELMOD3Q96FG2 381 aa1.69□□□□□ -2.14
SMG1-212ENST00000566328 C1orf74Q96LT6 269 aa1.69□□□□□ -2.14
SMG1-212ENST00000566328 WDFY2Q96P53 400 aa1.69□□□□□ -2.14
SMG1-212ENST00000566328 SPAG5Q96R06 1193 aa1.69□□□□□ -2.14
SMG1-212ENST00000566328 SDHCQ99643 169 aaPredicted RBP1.69□□□□□ -2.14
SMG1-212ENST00000566328 MAP3K3Q99759 626 aa1.69□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms