RNA–Protein interactions for RNA: ENST00000566029.5

CHD9-218, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD9, Length 13,110 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-218ENST00000566029 ELOAQ14241 798 aaKnown RBP2.86□□□□□ -1.95
CHD9-218ENST00000566029 ATPAF1Q5TC12 328 aaPredicted RBP2.86□□□□□ -1.95
CHD9-218ENST00000566029 SCYL2Q6P3W7 929 aa2.86□□□□□ -1.95
CHD9-218ENST00000566029 ZNF852Q6ZMS4 543 aa2.86□□□□□ -1.95
CHD9-218ENST00000566029 LRP11Q86VZ4 500 aa2.86□□□□□ -1.95
CHD9-218ENST00000566029 CCDC36Q8IYA8 594 aa2.86□□□□□ -1.95
CHD9-218ENST00000566029 ZNF527Q8NB42 609 aa2.86□□□□□ -1.95
CHD9-218ENST00000566029 SLAIN1Q8ND83 568 aa2.86□□□□□ -1.95
CHD9-218ENST00000566029 ST8SIA4Q92187 359 aa2.86□□□□□ -1.95
CHD9-218ENST00000566029 GAD1Q99259 594 aa2.86□□□□□ -1.95
CHD9-218ENST00000566029 WACQ9BTA9 647 aa2.86□□□□□ -1.95
CHD9-218ENST00000566029 SLIRPQ9GZT3 109 aaKnown RBP2.86□□□□□ -1.95
CHD9-218ENST00000566029 ILKAPQ9H0C8 392 aaPredicted RBP2.86□□□□□ -1.95
CHD9-218ENST00000566029 CRISPLD1Q9H336 500 aa2.86□□□□□ -1.95
CHD9-218ENST00000566029 MROH8Q9H579 483 aa2.86□□□□□ -1.95
CHD9-218ENST00000566029 ENTPD7Q9NQZ7 604 aa2.86□□□□□ -1.95
CHD9-218ENST00000566029 PNO1Q9NRX1 252 aaKnown RBP2.86□□□□□ -1.95
CHD9-218ENST00000566029 TRHDEQ9UKU6 1024 aa2.86□□□□□ -1.95
CHD9-218ENST00000566029 CSADQ9Y600 493 aa2.86□□□□□ -1.95
CHD9-218ENST00000566029 STYXL1Q9Y6J8 313 aa2.86□□□□□ -1.95
CHD9-218ENST00000566029 SOWAHBA6NEL2 793 aa2.86□□□□□ -1.95
CHD9-218ENST00000566029 HOXD4P09016 255 aaPredicted RBP2.86□□□□□ -1.95
CHD9-218ENST00000566029 CTPS1P17812 591 aa2.86□□□□□ -1.95
CHD9-218ENST00000566029 SCNN1GP51170 649 aa2.86□□□□□ -1.95
CHD9-218ENST00000566029 LGALS3BPQ08380 585 aa2.86□□□□□ -1.95
CHD9-218ENST00000566029 ZNF267Q14586 743 aaPredicted RBP2.86□□□□□ -1.95
CHD9-218ENST00000566029 USP10Q14694 798 aaKnown RBP2.86□□□□□ -1.95
CHD9-218ENST00000566029 ARL13AQ5H913 290 aaPredicted RBP2.86□□□□□ -1.95
CHD9-218ENST00000566029 ZNF517Q6ZMY9 492 aaPredicted RBP2.86□□□□□ -1.95
CHD9-218ENST00000566029 SSX9Q7RTT3 188 aa2.86□□□□□ -1.95
CHD9-218ENST00000566029 PARP16Q8N5Y8 322 aa2.86□□□□□ -1.95
CHD9-218ENST00000566029 OR5K1Q8NHB7 308 aa2.86□□□□□ -1.95
CHD9-218ENST00000566029 CA5BP1Q8WTZ4 195 aa2.86□□□□□ -1.95
CHD9-218ENST00000566029 RLN3Q8WXF3 142 aa2.86□□□□□ -1.95
CHD9-218ENST00000566029 OPALINQ96PE5 141 aa2.86□□□□□ -1.95
CHD9-218ENST00000566029 AMNQ9BXJ7 453 aa2.86□□□□□ -1.95
CHD9-218ENST00000566029 OR51B5Q9H339 312 aa2.86□□□□□ -1.95
CHD9-218ENST00000566029 CFAP97Q9P2B7 532 aa2.86□□□□□ -1.95
CHD9-218ENST00000566029 TMEFF2Q9UIK5 374 aaPredicted RBP2.86□□□□□ -1.95
CHD9-218ENST00000566029 BAIAP2Q9UQB8 552 aa2.86□□□□□ -1.95
CHD9-218ENST00000566029 RUVBL2Q9Y230 463 aaKnown RBP2.86□□□□□ -1.95
CHD9-218ENST00000566029 PRELID3BQ9Y3B1 194 aa2.86□□□□□ -1.95
CHD9-218ENST00000566029 ASB4Q9Y574 426 aa2.86□□□□□ -1.95
CHD9-218ENST00000566029 TAF1LQ8IZX4 1826 aa2.86□□□□□ -1.95
CHD9-218ENST00000566029 A0A0G2JPF8 293 aa2.86□□□□□ -1.95
CHD9-218ENST00000566029 HNRNPCL3B7ZW38 293 aa2.86□□□□□ -1.95
CHD9-218ENST00000566029 B4GAT1O43505 415 aa2.86□□□□□ -1.95
CHD9-218ENST00000566029 RPP14O95059 124 aaKnown RBP2.86□□□□□ -1.95
CHD9-218ENST00000566029 HNRNPCL4P0DMR1 293 aa2.86□□□□□ -1.95
CHD9-218ENST00000566029 ZNF16P17020 682 aaPredicted RBP2.86□□□□□ -1.95
CHD9-218ENST00000566029 BTCP35070 178 aa2.86□□□□□ -1.95
CHD9-218ENST00000566029 SPRP35270 261 aaPredicted RBP2.86□□□□□ -1.95
CHD9-218ENST00000566029 RPL3P39023 403 aaKnown RBP2.86□□□□□ -1.95
CHD9-218ENST00000566029 PNPLA4P41247 253 aa2.86□□□□□ -1.95
CHD9-218ENST00000566029 ZFP36L2P47974 494 aaKnown RBP2.86□□□□□ -1.95
CHD9-218ENST00000566029 CDH11P55287 796 aa2.86□□□□□ -1.95
CHD9-218ENST00000566029 MVKQ03426 396 aa2.86□□□□□ -1.95
CHD9-218ENST00000566029 CUL2Q13617 745 aa2.86□□□□□ -1.95
CHD9-218ENST00000566029 ZNF235Q14590 738 aa2.86□□□□□ -1.95
CHD9-218ENST00000566029 EIF2S3LQ2VIR3 472 aaKnown RBP2.86□□□□□ -1.95
CHD9-218ENST00000566029 ANKRD34AQ69YU3 496 aa2.86□□□□□ -1.95
CHD9-218ENST00000566029 NPNTQ6UXI9 565 aa2.86□□□□□ -1.95
CHD9-218ENST00000566029 C8orf59Q8N0T1 100 aaPredicted RBP2.86□□□□□ -1.95
CHD9-218ENST00000566029 C9orf62Q8N4C0 152 aa2.86□□□□□ -1.95
CHD9-218ENST00000566029 CPT1CQ8TCG5 803 aa2.86□□□□□ -1.95
CHD9-218ENST00000566029 KLHL6Q8WZ60 621 aa2.86□□□□□ -1.95
CHD9-218ENST00000566029 ZHX1-C8orf76Q96EF9 292 aa2.86□□□□□ -1.95
CHD9-218ENST00000566029 FAM213AQ9BRX8 229 aa2.86□□□□□ -1.95
CHD9-218ENST00000566029 PDCD10Q9BUL8 212 aa2.86□□□□□ -1.95
CHD9-218ENST00000566029 TMEM39AQ9NV64 488 aa2.86□□□□□ -1.95
CHD9-218ENST00000566029 MORF4L1Q9UBU8 362 aa2.86□□□□□ -1.95
CHD9-218ENST00000566029 TMPRSS11EQ9UL52 423 aa2.86□□□□□ -1.95
CHD9-218ENST00000566029 GRXCR2A6NFK2 248 aa2.86□□□□□ -1.95
CHD9-218ENST00000566029 WDR64B1ANS9 1081 aa2.86□□□□□ -1.95
CHD9-218ENST00000566029 M0R082 166 aa2.86□□□□□ -1.95
CHD9-218ENST00000566029 APOL3O95236 402 aa2.86□□□□□ -1.95
CHD9-218ENST00000566029 TGM2P21980 687 aa2.86□□□□□ -1.95
CHD9-218ENST00000566029 LIG4P49917 911 aa2.86□□□□□ -1.95
CHD9-218ENST00000566029 GPR85P60893 370 aa2.86□□□□□ -1.95
CHD9-218ENST00000566029 MC1RQ01726 317 aa2.86□□□□□ -1.95
CHD9-218ENST00000566029 GTF2H3Q13889 308 aa2.86□□□□□ -1.95
CHD9-218ENST00000566029 SETMARQ53H47 684 aaPredicted RBP2.86□□□□□ -1.95
CHD9-218ENST00000566029 PDE12Q6L8Q7 609 aaKnown RBP2.86□□□□□ -1.95
CHD9-218ENST00000566029 OVCH2Q7RTZ1 564 aa2.86□□□□□ -1.95
CHD9-218ENST00000566029 NLRP8Q86W28 1048 aa2.86□□□□□ -1.95
CHD9-218ENST00000566029 PTRH1Q86Y79 214 aaKnown RBP2.86□□□□□ -1.95
CHD9-218ENST00000566029 DNERQ8NFT8 737 aa2.86□□□□□ -1.95
CHD9-218ENST00000566029 CCDC126Q96EE4 140 aa2.86□□□□□ -1.95
CHD9-218ENST00000566029 VAT1LQ9HCJ6 419 aa2.86□□□□□ -1.95
CHD9-218ENST00000566029 ASNSD1Q9NWL6 643 aa2.86□□□□□ -1.95
CHD9-218ENST00000566029 FBXO10Q9UK96 956 aa2.86□□□□□ -1.95
CHD9-218ENST00000566029 PCDHB3Q9Y5E6 796 aa2.86□□□□□ -1.95
CHD9-218ENST00000566029 FER1L6Q2WGJ9 1857 aa2.86□□□□□ -1.95
CHD9-218ENST00000566029 hCG_1807616A0A1W2PRN6 198 aa2.86□□□□□ -1.95
CHD9-218ENST00000566029 ZNF98A6NK75 572 aa2.86□□□□□ -1.95
CHD9-218ENST00000566029 MPTX1A8MV57 137 aa2.86□□□□□ -1.95
CHD9-218ENST00000566029 NPIPA2E9PIF3 369 aa2.86□□□□□ -1.95
CHD9-218ENST00000566029 NPIPA5E9PKD4 350 aa2.86□□□□□ -1.95
CHD9-218ENST00000566029 NPIPA3F8WFD2 350 aa2.86□□□□□ -1.95
CHD9-218ENST00000566029 DNAJB6O75190 326 aa2.86□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms