RNA–Protein interactions for RNA: ENST00000564593.1

LINC00560-201, long intergenic non-protein coding RNA 560, humanhuman

TSL 1 (best) BASIC

Gene LINC00560, Length 1,599 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00560-201ENST00000564593 SFMBT2Q5VUG0 894 aa4.35□□□□□ -1.71
LINC00560-201ENST00000564593 ZNF771Q7L3S4 317 aaPredicted RBP4.35□□□□□ -1.71
LINC00560-201ENST00000564593 SIX6OS1Q8N1H7 587 aa4.35□□□□□ -1.71
LINC00560-201ENST00000564593 C9orf106Q8NAJ2 232 aa4.35□□□□□ -1.71
LINC00560-201ENST00000564593 HES6Q96HZ4 224 aa4.35□□□□□ -1.71
LINC00560-201ENST00000564593 CCDC114Q96M63 670 aa4.35□□□□□ -1.71
LINC00560-201ENST00000564593 RAD9AQ99638 391 aa4.35□□□□□ -1.71
LINC00560-201ENST00000564593 ALDH8A1Q9H2A2 487 aaPredicted RBP4.35□□□□□ -1.71
LINC00560-201ENST00000564593 A4GALTQ9NPC4 353 aa4.35□□□□□ -1.71
LINC00560-201ENST00000564593 ECHDC1Q9NTX5 307 aa4.35□□□□□ -1.71
LINC00560-201ENST00000564593 FAM118AQ9NWS6 357 aa4.35□□□□□ -1.71
LINC00560-201ENST00000564593 TMED3Q9Y3Q3 217 aa4.35□□□□□ -1.71
LINC00560-201ENST00000564593 XPNPEP2O43895 674 aa4.34□□□□□ -1.71
LINC00560-201ENST00000564593 SIX3O95343 332 aaPredicted RBP4.34□□□□□ -1.71
LINC00560-201ENST00000564593 MOCS3O95396 460 aa4.34□□□□□ -1.71
LINC00560-201ENST00000564593 TCF4P15884 667 aa4.34□□□□□ -1.71
LINC00560-201ENST00000564593 MUTP22033 750 aa4.34□□□□□ -1.71
LINC00560-201ENST00000564593 MARK3P27448 753 aa4.34□□□□□ -1.71
LINC00560-201ENST00000564593 NAGLUP54802 743 aa4.34□□□□□ -1.71
LINC00560-201ENST00000564593 GAS1P54826 345 aa4.34□□□□□ -1.71
LINC00560-201ENST00000564593 KRT83P78385 493 aa4.34□□□□□ -1.71
LINC00560-201ENST00000564593 LGALS3BPQ08380 585 aa4.34□□□□□ -1.71
LINC00560-201ENST00000564593 ITGA7Q13683 1181 aa4.34□□□□□ -1.71
LINC00560-201ENST00000564593 TUBB2AQ13885 445 aa4.34□□□□□ -1.71
LINC00560-201ENST00000564593 UGT3A2Q3SY77 523 aa4.34□□□□□ -1.71
LINC00560-201ENST00000564593 ZNF672Q499Z4 452 aaPredicted RBP4.34□□□□□ -1.71
LINC00560-201ENST00000564593 CCNYL2Q5T2Q4 361 aa4.34□□□□□ -1.71
LINC00560-201ENST00000564593 FAM91A1Q658Y4 838 aa4.34□□□□□ -1.71
LINC00560-201ENST00000564593 ENPP7Q6UWV6 458 aa4.34□□□□□ -1.71
LINC00560-201ENST00000564593 OR11H4Q8NGC9 324 aa4.34□□□□□ -1.71
LINC00560-201ENST00000564593 VANGL1Q8TAA9 524 aaPredicted RBP4.34□□□□□ -1.71
LINC00560-201ENST00000564593 GRHL3Q8TE85 626 aa4.34□□□□□ -1.71
LINC00560-201ENST00000564593 HSD17B8Q92506 261 aa4.34□□□□□ -1.71
LINC00560-201ENST00000564593 SLC47A1Q96FL8 570 aa4.34□□□□□ -1.71
LINC00560-201ENST00000564593 INTS14Q96SY0 518 aa4.34□□□□□ -1.71
LINC00560-201ENST00000564593 TUBB2BQ9BVA1 445 aa4.34□□□□□ -1.71
LINC00560-201ENST00000564593 PRRG4Q9BZD6 226 aa4.34□□□□□ -1.71
LINC00560-201ENST00000564593 MIS12Q9H081 205 aa4.34□□□□□ -1.71
LINC00560-201ENST00000564593 DNAJC4Q9NNZ3 241 aa4.34□□□□□ -1.71
LINC00560-201ENST00000564593 SPHK1Q9NYA1 384 aa4.34□□□□□ -1.71
LINC00560-201ENST00000564593 TXNDC16Q9P2K2 825 aa4.34□□□□□ -1.71
LINC00560-201ENST00000564593 CACNG4Q9UBN1 327 aa4.34□□□□□ -1.71
LINC00560-201ENST00000564593 UNC13AQ9UPW8 1703 aa4.33□□□□□ -1.72
LINC00560-201ENST00000564593 ENO4A6NNW6 628 aa4.33□□□□□ -1.72
LINC00560-201ENST00000564593 PLOD2O00469 737 aa4.33□□□□□ -1.72
LINC00560-201ENST00000564593 ZFYP08048 801 aaPredicted RBP4.33□□□□□ -1.72
LINC00560-201ENST00000564593 FAM58BPP0C7Q3 252 aa4.33□□□□□ -1.72
LINC00560-201ENST00000564593 IRF2P14316 349 aa4.33□□□□□ -1.72
LINC00560-201ENST00000564593 EPCAMP16422 314 aa4.33□□□□□ -1.72
LINC00560-201ENST00000564593 ADRA2CP18825 462 aa4.33□□□□□ -1.72
LINC00560-201ENST00000564593 HSD17B3P37058 310 aa4.33□□□□□ -1.72
LINC00560-201ENST00000564593 DLK1P80370 383 aa4.33□□□□□ -1.72
LINC00560-201ENST00000564593 RPL36AP83881 106 aaKnown RBP4.33□□□□□ -1.72
LINC00560-201ENST00000564593 ARL16Q0P5N6 197 aa4.33□□□□□ -1.72
LINC00560-201ENST00000564593 PTK6Q13882 451 aa4.33□□□□□ -1.72
LINC00560-201ENST00000564593 ITPRIPL2Q3MIP1 535 aa4.33□□□□□ -1.72
LINC00560-201ENST00000564593 ZNF718Q3SXZ3 478 aa4.33□□□□□ -1.72
LINC00560-201ENST00000564593 DCAF10Q5QP82 559 aa4.33□□□□□ -1.72
LINC00560-201ENST00000564593 CYP4A22Q5TCH4 519 aa4.33□□□□□ -1.72
LINC00560-201ENST00000564593 SHEQ5VZ18 495 aa4.33□□□□□ -1.72
LINC00560-201ENST00000564593 MFSD6Q6ZSS7 791 aa4.33□□□□□ -1.72
LINC00560-201ENST00000564593 TIGD4Q8IY51 512 aa4.33□□□□□ -1.72
LINC00560-201ENST00000564593 CDK20Q8IZL9 346 aa4.33□□□□□ -1.72
LINC00560-201ENST00000564593 BMPERQ8N8U9 685 aa4.33□□□□□ -1.72
LINC00560-201ENST00000564593 C9orf43Q8TAL5 461 aaPredicted RBP4.33□□□□□ -1.72
LINC00560-201ENST00000564593 NSMAFQ92636 917 aa4.33□□□□□ -1.72
LINC00560-201ENST00000564593 ALG14Q96F25 216 aa4.33□□□□□ -1.72
LINC00560-201ENST00000564593 VMP1Q96GC9 406 aa4.33□□□□□ -1.72
LINC00560-201ENST00000564593 ERO1AQ96HE7 468 aa4.33□□□□□ -1.72
LINC00560-201ENST00000564593 NSL1Q96IY1 281 aa4.33□□□□□ -1.72
LINC00560-201ENST00000564593 ZNF354BQ96LW1 612 aa4.33□□□□□ -1.72
LINC00560-201ENST00000564593 RHNO1Q9BSD3 238 aa4.33□□□□□ -1.72
LINC00560-201ENST00000564593 BICC1Q9H694 974 aaKnown RBP4.33□□□□□ -1.72
LINC00560-201ENST00000564593 ZNF556Q9HAH1 456 aa4.33□□□□□ -1.72
LINC00560-201ENST00000564593 ZFP57Q9NU63 452 aa4.33□□□□□ -1.72
LINC00560-201ENST00000564593 COQ3Q9NZJ6 369 aa4.33□□□□□ -1.72
LINC00560-201ENST00000564593 DNAJB9Q9UBS3 223 aa4.33□□□□□ -1.72
LINC00560-201ENST00000564593 ZDHHC2Q9UIJ5 367 aa4.33□□□□□ -1.72
LINC00560-201ENST00000564593 A0A1W2PPK0 400 aa4.32□□□□□ -1.72
LINC00560-201ENST00000564593 FAM86B1E9PN63 330 aa4.32□□□□□ -1.72
LINC00560-201ENST00000564593 PRKRAO75569 313 aaKnown RBP4.32□□□□□ -1.72
LINC00560-201ENST00000564593 PIGNO95427 931 aa4.32□□□□□ -1.72
LINC00560-201ENST00000564593 TGDSO95455 350 aa4.32□□□□□ -1.72
LINC00560-201ENST00000564593 CAVIN2O95810 425 aa4.32□□□□□ -1.72
LINC00560-201ENST00000564593 VIMP08670 466 aaKnown RBP4.32□□□□□ -1.72
LINC00560-201ENST00000564593 FAM86B2P0C5J1 330 aa4.32□□□□□ -1.72
LINC00560-201ENST00000564593 MYL6BP14649 208 aa4.32□□□□□ -1.72
LINC00560-201ENST00000564593 UGCGQ16739 394 aa4.32□□□□□ -1.72
LINC00560-201ENST00000564593 UGP2Q16851 508 aa4.32□□□□□ -1.72
LINC00560-201ENST00000564593 ODF4Q2M2E3 257 aa4.32□□□□□ -1.72
LINC00560-201ENST00000564593 LRRC73Q5JTD7 316 aa4.32□□□□□ -1.72
LINC00560-201ENST00000564593 SPDYCQ5MJ68 293 aa4.32□□□□□ -1.72
LINC00560-201ENST00000564593 MSANTD1Q6ZTZ1 278 aa4.32□□□□□ -1.72
LINC00560-201ENST00000564593 CIARTQ8N365 385 aaPredicted RBP4.32□□□□□ -1.72
LINC00560-201ENST00000564593 RYBPQ8N488 228 aaPredicted RBP4.32□□□□□ -1.72
LINC00560-201ENST00000564593 OR4K1Q8NGD4 311 aa4.32□□□□□ -1.72
LINC00560-201ENST00000564593 OCC1Q8TAD7 63 aa4.32□□□□□ -1.72
LINC00560-201ENST00000564593 OLIG1Q8TAK6 271 aa4.32□□□□□ -1.72
LINC00560-201ENST00000564593 HEXDCQ8WVB3 486 aa4.32□□□□□ -1.72
LINC00560-201ENST00000564593 PROX1Q92786 737 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms