RNA–Protein interactions for RNA: ENST00000564106.1

UBFD1-203, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 2

Gene UBFD1, Length 587 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-203ENST00000564106 MFSD2AQ8NA29 543 aa9.51□□□□□ -0.89
UBFD1-203ENST00000564106 OR56A4Q8NGH8 313 aa9.51□□□□□ -0.89
UBFD1-203ENST00000564106 SKA1Q96BD8 255 aa9.51□□□□□ -0.89
UBFD1-203ENST00000564106 CNDP2Q96KP4 475 aaKnown RBP9.51□□□□□ -0.89
UBFD1-203ENST00000564106 LINC00615Q96LM1 132 aaPredicted RBP9.51□□□□□ -0.89
UBFD1-203ENST00000564106 FOPNLQ96NB1 174 aa9.51□□□□□ -0.89
UBFD1-203ENST00000564106 BBC3Q96PG8 261 aaPredicted RBP9.51□□□□□ -0.89
UBFD1-203ENST00000564106 CDC6Q99741 560 aa9.51□□□□□ -0.89
UBFD1-203ENST00000564106 CCT7Q99832 543 aa9.51□□□□□ -0.89
UBFD1-203ENST00000564106 EGFL8Q99944 293 aa9.51□□□□□ -0.89
UBFD1-203ENST00000564106 CCM2Q9BSQ5 444 aa9.51□□□□□ -0.89
UBFD1-203ENST00000564106 TCEAL2Q9H3H9 227 aaPredicted RBP9.51□□□□□ -0.89
UBFD1-203ENST00000564106 COG4Q9H9E3 785 aa9.51□□□□□ -0.89
UBFD1-203ENST00000564106 GPR27Q9NS67 375 aa9.51□□□□□ -0.89
UBFD1-203ENST00000564106 TMPRSS11EQ9UL52 423 aa9.51□□□□□ -0.89
UBFD1-203ENST00000564106 SLC12A4Q9UP95 1085 aa9.51□□□□□ -0.89
UBFD1-203ENST00000564106 CDYLQ9Y232 598 aa9.51□□□□□ -0.89
UBFD1-203ENST00000564106 DNMT3AQ9Y6K1 912 aaPredicted RBP9.51□□□□□ -0.89
UBFD1-203ENST00000564106 PTPRQQ9UMZ3 2332 aa9.5□□□□□ -0.89
UBFD1-203ENST00000564106 OR2AG2A6NM03 316 aa9.5□□□□□ -0.89
UBFD1-203ENST00000564106 SLC22A2O15244 555 aa9.5□□□□□ -0.89
UBFD1-203ENST00000564106 INPP4BO15327 924 aa9.5□□□□□ -0.89
UBFD1-203ENST00000564106 SIGLEC6O43699 453 aa9.5□□□□□ -0.89
UBFD1-203ENST00000564106 TLX3O43711 291 aaPredicted RBP9.5□□□□□ -0.89
UBFD1-203ENST00000564106 DIAPH2O60879 1101 aa9.5□□□□□ -0.89
UBFD1-203ENST00000564106 KATNA1O75449 491 aa9.5□□□□□ -0.89
UBFD1-203ENST00000564106 GPC4O75487 556 aa9.5□□□□□ -0.89
UBFD1-203ENST00000564106 CRCPO75575 148 aa9.5□□□□□ -0.89
UBFD1-203ENST00000564106 SLCO2B1O94956 709 aa9.5□□□□□ -0.89
UBFD1-203ENST00000564106 LDOC1O95751 146 aaPredicted RBP9.5□□□□□ -0.89
UBFD1-203ENST00000564106 SOD1P00441 154 aa9.5□□□□□ -0.89
UBFD1-203ENST00000564106 CATP04040 527 aaKnown RBP9.5□□□□□ -0.89
UBFD1-203ENST00000564106 FGF4P08620 206 aa9.5□□□□□ -0.89
UBFD1-203ENST00000564106 THEGLP0DJG4 465 aa9.5□□□□□ -0.89
UBFD1-203ENST00000564106 MPSTP25325 297 aa9.5□□□□□ -0.89
UBFD1-203ENST00000564106 MAP4P27816 1152 aaKnown RBP9.5□□□□□ -0.89
UBFD1-203ENST00000564106 ARRB2P32121 409 aa9.5□□□□□ -0.89
UBFD1-203ENST00000564106 CA5AP35218 305 aa9.5□□□□□ -0.89
UBFD1-203ENST00000564106 KCNC1P48547 511 aa9.5□□□□□ -0.89
UBFD1-203ENST00000564106 PKNOX1P55347 436 aa9.5□□□□□ -0.89
UBFD1-203ENST00000564106 CLCQ05315 142 aa9.5□□□□□ -0.89
UBFD1-203ENST00000564106 SF3A3Q12874 501 aaKnown RBP eCLIP9.5□□□□□ -0.89
UBFD1-203ENST00000564106 GALNTL6Q49A17 601 aa9.5□□□□□ -0.89
UBFD1-203ENST00000564106 UNC50Q53HI1 259 aa9.5□□□□□ -0.89
UBFD1-203ENST00000564106 PNCKQ6P2M8 343 aa9.5□□□□□ -0.89
UBFD1-203ENST00000564106 UBE2R2Q712K3 238 aaPredicted RBP9.5□□□□□ -0.89
UBFD1-203ENST00000564106 DET1Q7L5Y6 550 aa9.5□□□□□ -0.89
UBFD1-203ENST00000564106 MTDHQ86UE4 582 aaKnown RBP9.5□□□□□ -0.89
UBFD1-203ENST00000564106 HORMAD1Q86X24 394 aa9.5□□□□□ -0.89
UBFD1-203ENST00000564106 TRAPPC5Q8IUR0 188 aa9.5□□□□□ -0.89
UBFD1-203ENST00000564106 CLYBLQ8N0X4 340 aa9.5□□□□□ -0.89
UBFD1-203ENST00000564106 LSMEM2Q8N112 164 aa9.5□□□□□ -0.89
UBFD1-203ENST00000564106 RASGEF1AQ8N9B8 481 aa9.5□□□□□ -0.89
UBFD1-203ENST00000564106 DENND6BQ8NEG7 585 aa9.5□□□□□ -0.89
UBFD1-203ENST00000564106 LKAAEAR1Q8TD35 194 aa9.5□□□□□ -0.89
UBFD1-203ENST00000564106 MCOLN3Q8TDD5 553 aa9.5□□□□□ -0.89
UBFD1-203ENST00000564106 UBTD2Q8WUN7 234 aa9.5□□□□□ -0.89
UBFD1-203ENST00000564106 SKA2Q8WVK7 121 aaPredicted RBP9.5□□□□□ -0.89
UBFD1-203ENST00000564106 ATL1Q8WXF7 558 aa9.5□□□□□ -0.89
UBFD1-203ENST00000564106 COX14Q96I36 57 aa9.5□□□□□ -0.89
UBFD1-203ENST00000564106 MAGEB10Q96LZ2 347 aaPredicted RBP9.5□□□□□ -0.89
UBFD1-203ENST00000564106 CCDC28BQ9BUN5 200 aa9.5□□□□□ -0.89
UBFD1-203ENST00000564106 SLC12A9Q9BXP2 914 aa9.5□□□□□ -0.89
UBFD1-203ENST00000564106 WDR26Q9H7D7 661 aa9.5□□□□□ -0.89
UBFD1-203ENST00000564106 ZNF395Q9H8N7 513 aaPredicted RBP9.5□□□□□ -0.89
UBFD1-203ENST00000564106 PARVBQ9HBI1 364 aa9.5□□□□□ -0.89
UBFD1-203ENST00000564106 TCF7L2Q9NQB0 619 aa9.5□□□□□ -0.89
UBFD1-203ENST00000564106 PHPT1Q9NRX4 125 aaPredicted RBP9.5□□□□□ -0.89
UBFD1-203ENST00000564106 PNPOQ9NVS9 261 aa9.5□□□□□ -0.89
UBFD1-203ENST00000564106 WWOXQ9NZC7 414 aa9.5□□□□□ -0.89
UBFD1-203ENST00000564106 LHX6Q9UPM6 363 aa9.5□□□□□ -0.89
UBFD1-203ENST00000564106 COQ6Q9Y2Z9 468 aa9.5□□□□□ -0.89
UBFD1-203ENST00000564106 KIF26BQ2KJY2 2108 aa9.5□□□□□ -0.89
UBFD1-203ENST00000564106 RP1P56715 2156 aa9.5□□□□□ -0.89
UBFD1-203ENST00000564106 A0A1W2PNU3 283 aaPredicted RBP9.49□□□□□ -0.89
UBFD1-203ENST00000564106 PMS2P1A4D2B8 440 aa9.49□□□□□ -0.89
UBFD1-203ENST00000564106 IGLON5A6NGN9 336 aa9.49□□□□□ -0.89
UBFD1-203ENST00000564106 NCF1BA6NI72 391 aaPredicted RBP9.49□□□□□ -0.89
UBFD1-203ENST00000564106 NCF1CA8MVU1 366 aaPredicted RBP9.49□□□□□ -0.89
UBFD1-203ENST00000564106 FCHO1O14526 889 aa9.49□□□□□ -0.89
UBFD1-203ENST00000564106 HGSO14964 777 aaPredicted RBP9.49□□□□□ -0.89
UBFD1-203ENST00000564106 VPS4BO75351 444 aa9.49□□□□□ -0.89
UBFD1-203ENST00000564106 MTX2O75431 263 aa9.49□□□□□ -0.89
UBFD1-203ENST00000564106 UBOX5O94941 541 aa9.49□□□□□ -0.89
UBFD1-203ENST00000564106 UNC5CO95185 931 aa9.49□□□□□ -0.89
UBFD1-203ENST00000564106 OTCP00480 354 aa9.49□□□□□ -0.89
UBFD1-203ENST00000564106 NCF1P14598 390 aaPredicted RBP9.49□□□□□ -0.89
UBFD1-203ENST00000564106 ADSLP30566 484 aaPredicted RBP9.49□□□□□ -0.89
UBFD1-203ENST00000564106 RPIAP49247 311 aa9.49□□□□□ -0.89
UBFD1-203ENST00000564106 IDH3AP50213 366 aa9.49□□□□□ -0.89
UBFD1-203ENST00000564106 MNAT1P51948 309 aa9.49□□□□□ -0.89
UBFD1-203ENST00000564106 INHBCP55103 352 aa9.49□□□□□ -0.89
UBFD1-203ENST00000564106 INSM1Q01101 510 aaPredicted RBP9.49□□□□□ -0.89
UBFD1-203ENST00000564106 BNIP1Q12981 228 aa9.49□□□□□ -0.89
UBFD1-203ENST00000564106 RPA4Q13156 261 aa9.49□□□□□ -0.89
UBFD1-203ENST00000564106 FZD2Q14332 565 aa9.49□□□□□ -0.89
UBFD1-203ENST00000564106 KRT72Q14CN4 511 aa9.49□□□□□ -0.89
UBFD1-203ENST00000564106 HES3Q5TGS1 186 aa9.49□□□□□ -0.89
UBFD1-203ENST00000564106 TMEM220Q6QAJ8 160 aa9.49□□□□□ -0.89
UBFD1-203ENST00000564106 ABI3BPQ7Z7G0 1075 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms