RNA–Protein interactions for RNA: ENST00000563498.1

NME3-204, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2 BASIC

Gene NME3, Length 920 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-204ENST00000563498 CDC23Q9UJX2 597 aa17.94■□□□□ 0.46
NME3-204ENST00000563498 NXT1Q9UKK6 140 aaKnown RBP17.94■□□□□ 0.46
NME3-204ENST00000563498 ENTPD4Q9Y227 616 aa17.94■□□□□ 0.46
NME3-204ENST00000563498 PRSS21Q9Y6M0 314 aa17.94■□□□□ 0.46
NME3-204ENST00000563498 CCDC78A2IDD5 438 aa17.93■□□□□ 0.46
NME3-204ENST00000563498 AKR1B15C9JRZ8 316 aaPredicted RBP17.93■□□□□ 0.46
NME3-204ENST00000563498 HNRNPRO43390 633 aaKnown RBP17.93■□□□□ 0.46
NME3-204ENST00000563498 OR56A5P0C7T3 313 aa17.93■□□□□ 0.46
NME3-204ENST00000563498 MAGP20916 626 aa17.93■□□□□ 0.46
NME3-204ENST00000563498 RAB28P51157 221 aa17.93■□□□□ 0.46
NME3-204ENST00000563498 ZNF169Q14929 603 aaPredicted RBP17.93■□□□□ 0.46
NME3-204ENST00000563498 ZRSR2Q15696 482 aaKnown RBP17.93■□□□□ 0.46
NME3-204ENST00000563498 NKG7Q16617 165 aa17.93■□□□□ 0.46
NME3-204ENST00000563498 PARP6Q2NL67 630 aa17.93■□□□□ 0.46
NME3-204ENST00000563498 KIRREL2Q6UWL6 708 aa17.93■□□□□ 0.46
NME3-204ENST00000563498 TTLL10Q6ZVT0 673 aa17.93■□□□□ 0.46
NME3-204ENST00000563498 MICALCLQ6ZW33 695 aa17.93■□□□□ 0.46
NME3-204ENST00000563498 MCATQ8IVS2 390 aaKnown RBP17.93■□□□□ 0.46
NME3-204ENST00000563498 SLC22A18Q96BI1 424 aa17.93■□□□□ 0.46
NME3-204ENST00000563498 VPS50Q96JG6 964 aa17.93■□□□□ 0.46
NME3-204ENST00000563498 ALS2CR12Q96Q35 445 aa17.93■□□□□ 0.46
NME3-204ENST00000563498 LHPPQ9H008 270 aa17.93■□□□□ 0.46
NME3-204ENST00000563498 OSGIN2Q9Y236 505 aa17.93■□□□□ 0.46
NME3-204ENST00000563498 HS3ST3B1Q9Y662 390 aa17.93■□□□□ 0.46
NME3-204ENST00000563498 MROH6A6NGR9 719 aa17.92■□□□□ 0.46
NME3-204ENST00000563498 F8W8V4 182 aa17.92■□□□□ 0.46
NME3-204ENST00000563498 DSCR3O14972 297 aa17.92■□□□□ 0.46
NME3-204ENST00000563498 TJP3O95049 919 aa17.92■□□□□ 0.46
NME3-204ENST00000563498 TPH1P17752 444 aa17.92■□□□□ 0.46
NME3-204ENST00000563498 MSNP26038 577 aaKnown RBP17.92■□□□□ 0.46
NME3-204ENST00000563498 PKLRP30613 574 aa17.92■□□□□ 0.46
NME3-204ENST00000563498 POU6F1Q14863 301 aa17.92■□□□□ 0.46
NME3-204ENST00000563498 BRD3Q15059 726 aa17.92■□□□□ 0.46
NME3-204ENST00000563498 TLR1Q15399 786 aa17.92■□□□□ 0.46
NME3-204ENST00000563498 DNAJC21Q5F1R6 531 aaKnown RBP17.92■□□□□ 0.46
NME3-204ENST00000563498 FCRL6Q6DN72 434 aa17.92■□□□□ 0.46
NME3-204ENST00000563498 ARHGEF18Q6ZSZ5 1173 aa17.92■□□□□ 0.46
NME3-204ENST00000563498 CALR3Q96L12 384 aaKnown RBP17.92■□□□□ 0.46
NME3-204ENST00000563498 FAM118BQ9BPY3 351 aa17.92■□□□□ 0.46
NME3-204ENST00000563498 EPS8L2Q9H6S3 715 aa17.92■□□□□ 0.46
NME3-204ENST00000563498 IL1RAPL1Q9NZN1 696 aa17.92■□□□□ 0.46
NME3-204ENST00000563498 PLAGL1Q9UM63 463 aa17.92■□□□□ 0.46
NME3-204ENST00000563498 PCDHA13Q9Y5I0 950 aa17.92■□□□□ 0.46
NME3-204ENST00000563498 CROCCQ5TZA2 2017 aa17.91■□□□□ 0.46
NME3-204ENST00000563498 SNRNP200O75643 2136 aaKnown RBP17.91■□□□□ 0.46
NME3-204ENST00000563498 FOXN2P32314 431 aa17.91■□□□□ 0.46
NME3-204ENST00000563498 CETN2P41208 172 aa17.91■□□□□ 0.46
NME3-204ENST00000563498 CDC16Q13042 620 aa17.91■□□□□ 0.46
NME3-204ENST00000563498 TBX2Q13207 712 aaPredicted RBP17.91■□□□□ 0.46
NME3-204ENST00000563498 GRM7Q14831 915 aa17.91■□□□□ 0.46
NME3-204ENST00000563498 TUBB8Q3ZCM7 444 aa17.91■□□□□ 0.46
NME3-204ENST00000563498 ZC3H12BQ5HYM0 836 aaKnown RBP17.91■□□□□ 0.46
NME3-204ENST00000563498 TCTE1Q5JU00 501 aa17.91■□□□□ 0.46
NME3-204ENST00000563498 COX15Q7KZN9 410 aa17.91■□□□□ 0.46
NME3-204ENST00000563498 SLC22A15Q8IZD6 547 aa17.91■□□□□ 0.46
NME3-204ENST00000563498 LINC01555Q8NAE3 123 aa17.91■□□□□ 0.46
NME3-204ENST00000563498 MARVELD3Q96A59 401 aa17.91■□□□□ 0.46
NME3-204ENST00000563498 ZNF285Q96NJ3 590 aa17.91■□□□□ 0.46
NME3-204ENST00000563498 SLX1AQ9BQ83 275 aa17.91■□□□□ 0.46
NME3-204ENST00000563498 MENTQ9BUN1 341 aa17.91■□□□□ 0.46
NME3-204ENST00000563498 SEMA3GQ9NS98 782 aa17.91■□□□□ 0.46
NME3-204ENST00000563498 CUTCQ9NTM9 273 aa17.91■□□□□ 0.46
NME3-204ENST00000563498 INTS7Q9NVH2 962 aaKnown RBP17.91■□□□□ 0.46
NME3-204ENST00000563498 DOCK10Q96BY6 2186 aa17.9■□□□□ 0.46
NME3-204ENST00000563498 A0A1B0GUH1 482 aa17.9■□□□□ 0.46
NME3-204ENST00000563498 ALOX12BO75342 701 aa17.9■□□□□ 0.46
NME3-204ENST00000563498 S1PR4O95977 384 aa17.9■□□□□ 0.46
NME3-204ENST00000563498 RPN2P04844 631 aa17.9■□□□□ 0.46
NME3-204ENST00000563498 STSP08842 583 aa17.9■□□□□ 0.46
NME3-204ENST00000563498 CD9P21926 228 aa17.9■□□□□ 0.46
NME3-204ENST00000563498 ELAVL4P26378 380 aaKnown RBP17.9■□□□□ 0.46
NME3-204ENST00000563498 RWDD2BP57060 319 aa17.9■□□□□ 0.46
NME3-204ENST00000563498 SPA17Q15506 151 aa17.9■□□□□ 0.46
NME3-204ENST00000563498 P3H1Q32P28 736 aa17.9■□□□□ 0.46
NME3-204ENST00000563498 RPUSD3Q6P087 351 aaKnown RBP17.9■□□□□ 0.46
NME3-204ENST00000563498 NAPRTQ6XQN6 538 aa17.9■□□□□ 0.46
NME3-204ENST00000563498 FAM20CQ8IXL6 584 aa17.9■□□□□ 0.46
NME3-204ENST00000563498 SRRM1Q8IYB3 904 aaKnown RBP17.9■□□□□ 0.46
NME3-204ENST00000563498 CNDP1Q96KN2 507 aa17.9■□□□□ 0.46
NME3-204ENST00000563498 LMF1Q96S06 567 aa17.9■□□□□ 0.46
NME3-204ENST00000563498 TFR2Q9UP52 801 aa17.9■□□□□ 0.46
NME3-204ENST00000563498 TEP1Q99973 2627 aaKnown RBP17.9■□□□□ 0.46
NME3-204ENST00000563498 CCDC162PA2VCL2 907 aa17.89■□□□□ 0.45
NME3-204ENST00000563498 FITM1A5D6W6 292 aa17.89■□□□□ 0.45
NME3-204ENST00000563498 VSTM2BA6NLU5 285 aa17.89■□□□□ 0.45
NME3-204ENST00000563498 PSMD3O43242 534 aa17.89■□□□□ 0.45
NME3-204ENST00000563498 FKBP9O95302 570 aa17.89■□□□□ 0.45
NME3-204ENST00000563498 METTL18O95568 372 aa17.89■□□□□ 0.45
NME3-204ENST00000563498 MFAP5Q13361 173 aa17.89■□□□□ 0.45
NME3-204ENST00000563498 RBBP7Q16576 425 aa17.89■□□□□ 0.45
NME3-204ENST00000563498 FAM214AQ32MH5 1076 aa17.89■□□□□ 0.45
NME3-204ENST00000563498 FAM180AQ6UWF9 173 aa17.89■□□□□ 0.45
NME3-204ENST00000563498 ISLR2Q6UXK2 745 aa17.89■□□□□ 0.45
NME3-204ENST00000563498 DCUN1D3Q8IWE4 304 aa17.89■□□□□ 0.45
NME3-204ENST00000563498 PARP9Q8IXQ6 854 aa17.89■□□□□ 0.45
NME3-204ENST00000563498 CCDC170Q8IYT3 715 aa17.89■□□□□ 0.45
NME3-204ENST00000563498 TTC29Q8NA56 475 aaPredicted RBP17.89■□□□□ 0.45
NME3-204ENST00000563498 OR11G2Q8NGC1 345 aa17.89■□□□□ 0.45
NME3-204ENST00000563498 TTC1Q99614 292 aa17.89■□□□□ 0.45
NME3-204ENST00000563498 TRIM56Q9BRZ2 755 aaKnown RBP17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms