RNA–Protein interactions for RNA: ENST00000563485.2

HMGB1P33-201, Transcript of high mobility group box 1 pseudogene 33, humanhuman

BASIC

Gene HMGB1P33, Length 527 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P33-201ENST00000563485 FAAH2Q6GMR7 532 aa2.73□□□□□ -1.97
HMGB1P33-201ENST00000563485 CCDC70Q6NSX1 233 aa2.73□□□□□ -1.97
HMGB1P33-201ENST00000563485 TEX38Q6PEX7 206 aa2.73□□□□□ -1.97
HMGB1P33-201ENST00000563485 SLC25A47Q6Q0C1 308 aa2.73□□□□□ -1.97
HMGB1P33-201ENST00000563485 CEP57Q86XR8 500 aa2.73□□□□□ -1.97
HMGB1P33-201ENST00000563485 AFAP1Q8N556 730 aa2.73□□□□□ -1.97
HMGB1P33-201ENST00000563485 GPRC5AQ8NFJ5 357 aa2.73□□□□□ -1.97
HMGB1P33-201ENST00000563485 CCDC107Q8WV48 283 aa2.73□□□□□ -1.97
HMGB1P33-201ENST00000563485 HDAC2Q92769 488 aaKnown RBP2.73□□□□□ -1.97
HMGB1P33-201ENST00000563485 CCDC34Q96HJ3 373 aa2.73□□□□□ -1.97
HMGB1P33-201ENST00000563485 C10orf90Q96M02 699 aa2.73□□□□□ -1.97
HMGB1P33-201ENST00000563485 PRICKLE1Q96MT3 831 aaPredicted RBP2.73□□□□□ -1.97
HMGB1P33-201ENST00000563485 NECTIN4Q96NY8 510 aa2.73□□□□□ -1.97
HMGB1P33-201ENST00000563485 PAFAH2Q99487 392 aa2.73□□□□□ -1.97
HMGB1P33-201ENST00000563485 OLFM1Q99784 485 aa2.73□□□□□ -1.97
HMGB1P33-201ENST00000563485 TRIM6Q9C030 488 aaPredicted RBP2.73□□□□□ -1.97
HMGB1P33-201ENST00000563485 THAP2Q9H0W7 228 aa2.73□□□□□ -1.97
HMGB1P33-201ENST00000563485 SERINC1Q9NRX5 453 aa2.73□□□□□ -1.97
HMGB1P33-201ENST00000563485 ARHGEF38Q9NXL2 777 aa2.73□□□□□ -1.97
HMGB1P33-201ENST00000563485 WSB2Q9NYS7 404 aaPredicted RBP2.73□□□□□ -1.97
HMGB1P33-201ENST00000563485 OR6C2Q9NZP2 312 aa2.73□□□□□ -1.97
HMGB1P33-201ENST00000563485 MUTYHQ9UIF7 546 aa2.73□□□□□ -1.97
HMGB1P33-201ENST00000563485 TNNQ9UQP3 1299 aa2.73□□□□□ -1.97
HMGB1P33-201ENST00000563485 ABCA7Q8IZY2 2146 aa2.72□□□□□ -1.97
HMGB1P33-201ENST00000563485 PCDH11YQ9BZA8 1340 aa2.72□□□□□ -1.97
HMGB1P33-201ENST00000563485 ZNF541Q9H0D2 1346 aa2.72□□□□□ -1.97
HMGB1P33-201ENST00000563485 OR2A25A4D2G3 310 aa2.72□□□□□ -1.97
HMGB1P33-201ENST00000563485 MPTX1A8MV57 137 aa2.72□□□□□ -1.97
HMGB1P33-201ENST00000563485 B4DLN1 442 aa2.72□□□□□ -1.97
HMGB1P33-201ENST00000563485 AP3D1O14617 1153 aa2.72□□□□□ -1.97
HMGB1P33-201ENST00000563485 VILLO15195 856 aa2.72□□□□□ -1.97
HMGB1P33-201ENST00000563485 SEC24AO95486 1093 aa2.72□□□□□ -1.97
HMGB1P33-201ENST00000563485 OR2T7P0C7T2 308 aa2.72□□□□□ -1.97
HMGB1P33-201ENST00000563485 CDH3P22223 829 aa2.72□□□□□ -1.97
HMGB1P33-201ENST00000563485 LHCGRP22888 699 aa2.72□□□□□ -1.97
HMGB1P33-201ENST00000563485 PTPN3P26045 913 aa2.72□□□□□ -1.97
HMGB1P33-201ENST00000563485 MRPL12P52815 198 aaKnown RBP2.72□□□□□ -1.97
HMGB1P33-201ENST00000563485 ARF3P61204 181 aaPredicted RBP2.72□□□□□ -1.97
HMGB1P33-201ENST00000563485 ARF1P84077 181 aaKnown RBP2.72□□□□□ -1.97
HMGB1P33-201ENST00000563485 PAX8Q06710 450 aa2.72□□□□□ -1.97
HMGB1P33-201ENST00000563485 ZNF415Q09FC8 603 aa2.72□□□□□ -1.97
HMGB1P33-201ENST00000563485 LMOD3Q0VAK6 560 aa2.72□□□□□ -1.97
HMGB1P33-201ENST00000563485 TAF10Q12962 218 aa2.72□□□□□ -1.97
HMGB1P33-201ENST00000563485 TNIP1Q15025 636 aa2.72□□□□□ -1.97
HMGB1P33-201ENST00000563485 MOGAT2Q3SYC2 334 aa2.72□□□□□ -1.97
HMGB1P33-201ENST00000563485 RAB41Q5JT25 222 aa2.72□□□□□ -1.97
HMGB1P33-201ENST00000563485 DHRS7BQ6IAN0 325 aaPredicted RBP2.72□□□□□ -1.97
HMGB1P33-201ENST00000563485 C1orf131Q8NDD1 294 aaKnown RBP2.72□□□□□ -1.97
HMGB1P33-201ENST00000563485 OR13C3Q8NGS6 347 aa2.72□□□□□ -1.97
HMGB1P33-201ENST00000563485 MIPOL1Q8TD10 442 aa2.72□□□□□ -1.97
HMGB1P33-201ENST00000563485 RASL10AQ92737 203 aa2.72□□□□□ -1.97
HMGB1P33-201ENST00000563485 CDRT15Q96T59 188 aa2.72□□□□□ -1.97
HMGB1P33-201ENST00000563485 RAD9AQ99638 391 aa2.72□□□□□ -1.97
HMGB1P33-201ENST00000563485 SPHK1Q9NYA1 384 aa2.72□□□□□ -1.97
HMGB1P33-201ENST00000563485 LAS1LQ9Y4W2 734 aaKnown RBP2.72□□□□□ -1.97
HMGB1P33-201ENST00000563485 ZNF644Q9H582 1327 aaPredicted RBP2.71□□□□□ -1.98
HMGB1P33-201ENST00000563485 ENO4A6NNW6 628 aa2.71□□□□□ -1.98
HMGB1P33-201ENST00000563485 CTDSP2O14595 271 aa2.71□□□□□ -1.98
HMGB1P33-201ENST00000563485 GLRA3O75311 464 aa2.71□□□□□ -1.98
HMGB1P33-201ENST00000563485 DARSP14868 501 aaKnown RBP2.71□□□□□ -1.98
HMGB1P33-201ENST00000563485 TNFAIP3P21580 790 aa2.71□□□□□ -1.98
HMGB1P33-201ENST00000563485 JAK1P23458 1154 aa2.71□□□□□ -1.98
HMGB1P33-201ENST00000563485 PSMB10P40306 273 aa2.71□□□□□ -1.98
HMGB1P33-201ENST00000563485 MNDAP41218 407 aa2.71□□□□□ -1.98
HMGB1P33-201ENST00000563485 PTGER3P43115 390 aa2.71□□□□□ -1.98
HMGB1P33-201ENST00000563485 PGFP49763 221 aa2.71□□□□□ -1.98
HMGB1P33-201ENST00000563485 CYCSP99999 105 aaKnown RBP2.71□□□□□ -1.98
HMGB1P33-201ENST00000563485 GUCY2DQ02846 1103 aa2.71□□□□□ -1.98
HMGB1P33-201ENST00000563485 LY6DQ14210 128 aa2.71□□□□□ -1.98
HMGB1P33-201ENST00000563485 ODF4Q2M2E3 257 aa2.71□□□□□ -1.98
HMGB1P33-201ENST00000563485 PDLIM3Q53GG5 364 aaPredicted RBP2.71□□□□□ -1.98
HMGB1P33-201ENST00000563485 FAM180BQ6P0A1 224 aa2.71□□□□□ -1.98
HMGB1P33-201ENST00000563485 ADIPOR2Q86V24 386 aa2.71□□□□□ -1.98
HMGB1P33-201ENST00000563485 AQP11Q8NBQ7 271 aa2.71□□□□□ -1.98
HMGB1P33-201ENST00000563485 OR6S1Q8NH40 331 aa2.71□□□□□ -1.98
HMGB1P33-201ENST00000563485 OR1L3Q8NH93 324 aa2.71□□□□□ -1.98
HMGB1P33-201ENST00000563485 MAPK15Q8TD08 544 aa2.71□□□□□ -1.98
HMGB1P33-201ENST00000563485 Q9N2K0 584 aa2.71□□□□□ -1.98
HMGB1P33-201ENST00000563485 PPANQ9NQ55 473 aaKnown RBP2.71□□□□□ -1.98
HMGB1P33-201ENST00000563485 FAM207AQ9NSI2 230 aaPredicted RBP2.71□□□□□ -1.98
HMGB1P33-201ENST00000563485 TEX10Q9NXF1 929 aaPredicted RBP2.71□□□□□ -1.98
HMGB1P33-201ENST00000563485 SUCLA2Q9P2R7 463 aaPredicted RBP2.71□□□□□ -1.98
HMGB1P33-201ENST00000563485 STUB1Q9UNE7 303 aa2.71□□□□□ -1.98
HMGB1P33-201ENST00000563485 NME7Q9Y5B8 376 aa2.71□□□□□ -1.98
HMGB1P33-201ENST00000563485 TMEM221A6NGB7 291 aa2.7□□□□□ -1.98
HMGB1P33-201ENST00000563485 C2orf81A6NN90 581 aa2.7□□□□□ -1.98
HMGB1P33-201ENST00000563485 PI4K2BG5E9Z4 385 aa2.7□□□□□ -1.98
HMGB1P33-201ENST00000563485 CREB3O43889 395 aa2.7□□□□□ -1.98
HMGB1P33-201ENST00000563485 CDK2AP2O75956 126 aa2.7□□□□□ -1.98
HMGB1P33-201ENST00000563485 BCL10O95999 233 aa2.7□□□□□ -1.98
HMGB1P33-201ENST00000563485 IGHV3-13P01766 116 aa2.7□□□□□ -1.98
HMGB1P33-201ENST00000563485 VTNP04004 478 aa2.7□□□□□ -1.98
HMGB1P33-201ENST00000563485 DNAH10OSP0CZ25 163 aa2.7□□□□□ -1.98
HMGB1P33-201ENST00000563485 SMIM18P0DKX4 95 aa2.7□□□□□ -1.98
HMGB1P33-201ENST00000563485 SLC2A2P11168 524 aaPredicted RBP2.7□□□□□ -1.98
HMGB1P33-201ENST00000563485 GJA1P17302 382 aa2.7□□□□□ -1.98
HMGB1P33-201ENST00000563485 TRIM21P19474 475 aaKnown RBP2.7□□□□□ -1.98
HMGB1P33-201ENST00000563485 SLC9A3P48764 834 aa2.7□□□□□ -1.98
HMGB1P33-201ENST00000563485 LBX1P52954 281 aa2.7□□□□□ -1.98
HMGB1P33-201ENST00000563485 CSNK2BP67870 215 aa2.7□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms