RNA–Protein interactions for RNA: ENST00000563343.5

HERPUD1-206, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 4

Gene HERPUD1, Length 567 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-206ENST00000563343 NDST3O95803 873 aa7.37□□□□□ -1.23
HERPUD1-206ENST00000563343 PIM1P11309 404 aaPredicted RBP7.37□□□□□ -1.23
HERPUD1-206ENST00000563343 ACPPP15309 386 aa7.37□□□□□ -1.23
HERPUD1-206ENST00000563343 MCM3P25205 808 aa7.37□□□□□ -1.23
HERPUD1-206ENST00000563343 PDHA2P29803 388 aa7.37□□□□□ -1.23
HERPUD1-206ENST00000563343 OR1D4P47884 311 aa7.37□□□□□ -1.23
HERPUD1-206ENST00000563343 PRLHRP49683 370 aa7.37□□□□□ -1.23
HERPUD1-206ENST00000563343 ARSFP54793 590 aa7.37□□□□□ -1.23
HERPUD1-206ENST00000563343 PPIDQ08752 370 aaKnown RBP7.37□□□□□ -1.23
HERPUD1-206ENST00000563343 OLIG2Q13516 323 aa7.37□□□□□ -1.23
HERPUD1-206ENST00000563343 DPYSL3Q14195 570 aa7.37□□□□□ -1.23
HERPUD1-206ENST00000563343 KRT33BQ14525 404 aa7.37□□□□□ -1.23
HERPUD1-206ENST00000563343 PCSK7Q16549 785 aa7.37□□□□□ -1.23
HERPUD1-206ENST00000563343 LONRF2Q1L5Z9 754 aa7.37□□□□□ -1.23
HERPUD1-206ENST00000563343 SARM1Q6SZW1 724 aa7.37□□□□□ -1.23
HERPUD1-206ENST00000563343 C3P1Q6ZMU1 363 aa7.37□□□□□ -1.23
HERPUD1-206ENST00000563343 UNC5AQ6ZN44 842 aa7.37□□□□□ -1.23
HERPUD1-206ENST00000563343 NDUFAF7Q7L592 441 aa7.37□□□□□ -1.23
HERPUD1-206ENST00000563343 NT5DC3Q86UY8 548 aa7.37□□□□□ -1.23
HERPUD1-206ENST00000563343 KRTAP1-3Q8IUG1 177 aa7.37□□□□□ -1.23
HERPUD1-206ENST00000563343 CFAP206Q8IYR0 622 aa7.37□□□□□ -1.23
HERPUD1-206ENST00000563343 PQLC3Q8N755 202 aa7.37□□□□□ -1.23
HERPUD1-206ENST00000563343 MDS2Q8NDY4 140 aa7.37□□□□□ -1.23
HERPUD1-206ENST00000563343 WFDC11Q8NEX6 87 aa7.37□□□□□ -1.23
HERPUD1-206ENST00000563343 LILRB4Q8NHJ6 448 aa7.37□□□□□ -1.23
HERPUD1-206ENST00000563343 SPATA22Q8NHS9 363 aa7.37□□□□□ -1.23
HERPUD1-206ENST00000563343 CCDC110Q8TBZ0 833 aa7.37□□□□□ -1.23
HERPUD1-206ENST00000563343 STT3BQ8TCJ2 826 aa7.37□□□□□ -1.23
HERPUD1-206ENST00000563343 DLG3Q92796 817 aa7.37□□□□□ -1.23
HERPUD1-206ENST00000563343 MBD6Q96DN6 1003 aa7.37□□□□□ -1.23
HERPUD1-206ENST00000563343 RBM41Q96IZ5 413 aaKnown RBP7.37□□□□□ -1.23
HERPUD1-206ENST00000563343 VPS50Q96JG6 964 aa7.37□□□□□ -1.23
HERPUD1-206ENST00000563343 C18orf12Q96KH6 178 aa7.37□□□□□ -1.23
HERPUD1-206ENST00000563343 FRMD6Q96NE9 622 aa7.37□□□□□ -1.23
HERPUD1-206ENST00000563343 ZNF285Q96NJ3 590 aa7.37□□□□□ -1.23
HERPUD1-206ENST00000563343 SRPK1Q96SB4 655 aaKnown RBP7.37□□□□□ -1.23
HERPUD1-206ENST00000563343 CCM2Q9BSQ5 444 aa7.37□□□□□ -1.23
HERPUD1-206ENST00000563343 CRB3Q9BUF7 120 aa7.37□□□□□ -1.23
HERPUD1-206ENST00000563343 CEP41Q9BYV8 373 aa7.37□□□□□ -1.23
HERPUD1-206ENST00000563343 UCK2Q9BZX2 261 aa7.37□□□□□ -1.23
HERPUD1-206ENST00000563343 TSPAN10Q9H1Z9 355 aaPredicted RBP7.37□□□□□ -1.23
HERPUD1-206ENST00000563343 MVB12BQ9H7P6 319 aa7.37□□□□□ -1.23
HERPUD1-206ENST00000563343 COG4Q9H9E3 785 aa7.37□□□□□ -1.23
HERPUD1-206ENST00000563343 DNAJB12Q9NXW2 375 aaKnown RBP7.37□□□□□ -1.23
HERPUD1-206ENST00000563343 PLA2G2EQ9NZK7 142 aa7.37□□□□□ -1.23
HERPUD1-206ENST00000563343 HRH3Q9Y5N1 445 aa7.37□□□□□ -1.23
HERPUD1-206ENST00000563343 HEATR5BQ9P2D3 2071 aa7.37□□□□□ -1.23
HERPUD1-206ENST00000563343 IGLV3-12A0A075B6K2 115 aa7.36□□□□□ -1.23
HERPUD1-206ENST00000563343 NSG1A0A0A6YYJ2 146 aa7.36□□□□□ -1.23
HERPUD1-206ENST00000563343 GLYATL1P3A0A0U1RQE8 302 aa7.36□□□□□ -1.23
HERPUD1-206ENST00000563343 LOC285095A0A1B0GVY8 99 aa7.36□□□□□ -1.23
HERPUD1-206ENST00000563343 AGAP14A8MT82 685 aa7.36□□□□□ -1.23
HERPUD1-206ENST00000563343 CTAG2O75638 210 aa7.36□□□□□ -1.23
HERPUD1-206ENST00000563343 HEXAP06865 529 aa7.36□□□□□ -1.23
HERPUD1-206ENST00000563343 CHRM5P08912 532 aaPredicted RBP7.36□□□□□ -1.23
HERPUD1-206ENST00000563343 ZGLP1P0C6A0 271 aa7.36□□□□□ -1.23
HERPUD1-206ENST00000563343 ITGAMP11215 1152 aa7.36□□□□□ -1.23
HERPUD1-206ENST00000563343 PYGMP11217 842 aa7.36□□□□□ -1.23
HERPUD1-206ENST00000563343 MSH3P20585 1137 aa7.36□□□□□ -1.23
HERPUD1-206ENST00000563343 EEF1GP26641 437 aaKnown RBP7.36□□□□□ -1.23
HERPUD1-206ENST00000563343 NSG1P42857 185 aa7.36□□□□□ -1.23
HERPUD1-206ENST00000563343 CD151P48509 253 aa7.36□□□□□ -1.23
HERPUD1-206ENST00000563343 CARSP49589 748 aaKnown RBP7.36□□□□□ -1.23
HERPUD1-206ENST00000563343 MEOX1P50221 254 aa7.36□□□□□ -1.23
HERPUD1-206ENST00000563343 EFNA3P52797 238 aa7.36□□□□□ -1.23
HERPUD1-206ENST00000563343 FANCCQ00597 558 aa7.36□□□□□ -1.23
HERPUD1-206ENST00000563343 HSF1Q00613 529 aa7.36□□□□□ -1.23
HERPUD1-206ENST00000563343 PRKG2Q13237 762 aa7.36□□□□□ -1.23
HERPUD1-206ENST00000563343 ITGA9Q13797 1035 aa7.36□□□□□ -1.23
HERPUD1-206ENST00000563343 KRT31Q15323 416 aa7.36□□□□□ -1.23
HERPUD1-206ENST00000563343 PPP2R5EQ16537 467 aa7.36□□□□□ -1.23
HERPUD1-206ENST00000563343 DPCR1Q3MIW9 517 aa7.36□□□□□ -1.23
HERPUD1-206ENST00000563343 ZNF766Q5HY98 468 aa7.36□□□□□ -1.23
HERPUD1-206ENST00000563343 CCDC122Q5T0U0 273 aa7.36□□□□□ -1.23
HERPUD1-206ENST00000563343 ZDHHC20Q5W0Z9 365 aa7.36□□□□□ -1.23
HERPUD1-206ENST00000563343 CES4AQ5XG92 561 aa7.36□□□□□ -1.23
HERPUD1-206ENST00000563343 PPP1R2P3Q6NXS1 205 aa7.36□□□□□ -1.23
HERPUD1-206ENST00000563343 RIPOR1Q6ZS17 1223 aa7.36□□□□□ -1.23
HERPUD1-206ENST00000563343 NLRP9Q7RTR0 991 aa7.36□□□□□ -1.23
HERPUD1-206ENST00000563343 NIPA2Q8N8Q9 360 aa7.36□□□□□ -1.23
HERPUD1-206ENST00000563343 HDAC10Q969S8 669 aa7.36□□□□□ -1.23
HERPUD1-206ENST00000563343 FAF2Q96CS3 445 aa7.36□□□□□ -1.23
HERPUD1-206ENST00000563343 SCMH1Q96GD3 660 aa7.36□□□□□ -1.23
HERPUD1-206ENST00000563343 SIGLEC12Q96PQ1 595 aa7.36□□□□□ -1.23
HERPUD1-206ENST00000563343 HGH1Q9BTY7 390 aa7.36□□□□□ -1.23
HERPUD1-206ENST00000563343 HES7Q9BYE0 225 aa7.36□□□□□ -1.23
HERPUD1-206ENST00000563343 SLC25A51Q9H1U9 297 aa7.36□□□□□ -1.23
HERPUD1-206ENST00000563343 CLSTN2Q9H4D0 955 aa7.36□□□□□ -1.23
HERPUD1-206ENST00000563343 TRABDQ9H4I3 376 aa7.36□□□□□ -1.23
HERPUD1-206ENST00000563343 CUTCQ9NTM9 273 aa7.36□□□□□ -1.23
HERPUD1-206ENST00000563343 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP7.36□□□□□ -1.23
HERPUD1-206ENST00000563343 COQ3Q9NZJ6 369 aa7.36□□□□□ -1.23
HERPUD1-206ENST00000563343 PPT2Q9UMR5 302 aa7.36□□□□□ -1.23
HERPUD1-206ENST00000563343 RNF6Q9Y252 685 aa7.36□□□□□ -1.23
HERPUD1-206ENST00000563343 PLEKHA6Q9Y2H5 1048 aa7.36□□□□□ -1.23
HERPUD1-206ENST00000563343 LUC7L2Q9Y383 392 aaKnown RBP7.36□□□□□ -1.23
HERPUD1-206ENST00000563343 DNAJC13O75165 2243 aa7.36□□□□□ -1.23
HERPUD1-206ENST00000563343 TLN2Q9Y4G6 2542 aa7.36□□□□□ -1.23
HERPUD1-206ENST00000563343 CHD3Q12873 2000 aaKnown RBP7.35□□□□□ -1.23
HERPUD1-206ENST00000563343 ZNF407Q9C0G0 2248 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms