RNA–Protein interactions for RNA: ENST00000562722.1

SF3B3-202, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 881 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-202ENST00000562722 TEX15Q9BXT5 2789 aa12.49□□□□□ -0.41
SF3B3-202ENST00000562722 A0A1B0GX78 115 aa12.48□□□□□ -0.41
SF3B3-202ENST00000562722 MROH6A6NGR9 719 aa12.48□□□□□ -0.41
SF3B3-202ENST00000562722 GOT2P00505 430 aaKnown RBP12.48□□□□□ -0.41
SF3B3-202ENST00000562722 FOXN2P32314 431 aa12.48□□□□□ -0.41
SF3B3-202ENST00000562722 DCTP40126 519 aa12.48□□□□□ -0.41
SF3B3-202ENST00000562722 GDF10P55107 478 aa12.48□□□□□ -0.41
SF3B3-202ENST00000562722 HIF1AQ16665 826 aa12.48□□□□□ -0.41
SF3B3-202ENST00000562722 DNAJC21Q5F1R6 531 aaKnown RBP12.48□□□□□ -0.41
SF3B3-202ENST00000562722 AFTPHQ6ULP2 937 aa12.48□□□□□ -0.41
SF3B3-202ENST00000562722 Q6ZS92 163 aa12.48□□□□□ -0.41
SF3B3-202ENST00000562722 SHISA6Q6ZSJ9 500 aa12.48□□□□□ -0.41
SF3B3-202ENST00000562722 PEX26Q7Z412 305 aa12.48□□□□□ -0.41
SF3B3-202ENST00000562722 CUZD1Q86UP6 607 aa12.48□□□□□ -0.41
SF3B3-202ENST00000562722 MCATQ8IVS2 390 aaKnown RBP12.48□□□□□ -0.41
SF3B3-202ENST00000562722 TMEM151BQ8IW70 566 aa12.48□□□□□ -0.41
SF3B3-202ENST00000562722 METTL27Q8N6F8 245 aaPredicted RBP12.48□□□□□ -0.41
SF3B3-202ENST00000562722 LMNTD1Q8N9Z9 388 aa12.48□□□□□ -0.41
SF3B3-202ENST00000562722 TTC29Q8NA56 475 aaPredicted RBP12.48□□□□□ -0.41
SF3B3-202ENST00000562722 OR6P1Q8NGX9 317 aa12.48□□□□□ -0.41
SF3B3-202ENST00000562722 UBE2Q2Q8WVN8 375 aa12.48□□□□□ -0.41
SF3B3-202ENST00000562722 INPP5DQ92835 1189 aa12.48□□□□□ -0.41
SF3B3-202ENST00000562722 HDAC10Q969S8 669 aa12.48□□□□□ -0.41
SF3B3-202ENST00000562722 SLC22A18Q96BI1 424 aa12.48□□□□□ -0.41
SF3B3-202ENST00000562722 CNDP1Q96KN2 507 aa12.48□□□□□ -0.41
SF3B3-202ENST00000562722 RANBP9Q96S59 729 aa12.48□□□□□ -0.41
SF3B3-202ENST00000562722 WDR77Q9BQA1 342 aaPredicted RBP12.48□□□□□ -0.41
SF3B3-202ENST00000562722 SLC6A20Q9NP91 592 aa12.48□□□□□ -0.41
SF3B3-202ENST00000562722 INTS7Q9NVH2 962 aaKnown RBP12.48□□□□□ -0.41
SF3B3-202ENST00000562722 AMFRQ9UKV5 643 aa12.48□□□□□ -0.41
SF3B3-202ENST00000562722 SLC39A10Q9ULF5 831 aa12.48□□□□□ -0.41
SF3B3-202ENST00000562722 PCDHGA10Q9Y5H3 936 aa12.48□□□□□ -0.41
SF3B3-202ENST00000562722 UNC79Q9P2D8 2635 aa12.47□□□□□ -0.41
SF3B3-202ENST00000562722 HEATR9A2RTY3 570 aa12.47□□□□□ -0.41
SF3B3-202ENST00000562722 GRID2IPA4D2P6 1211 aa12.47□□□□□ -0.41
SF3B3-202ENST00000562722 ENO4A6NNW6 628 aa12.47□□□□□ -0.41
SF3B3-202ENST00000562722 E7EVH7 732 aa12.47□□□□□ -0.41
SF3B3-202ENST00000562722 APOA4P06727 396 aa12.47□□□□□ -0.41
SF3B3-202ENST00000562722 CD9P21926 228 aa12.47□□□□□ -0.41
SF3B3-202ENST00000562722 MMP11P24347 488 aa12.47□□□□□ -0.41
SF3B3-202ENST00000562722 CCR7P32248 378 aa12.47□□□□□ -0.41
SF3B3-202ENST00000562722 PPARGP37231 505 aaPredicted RBP12.47□□□□□ -0.41
SF3B3-202ENST00000562722 GRIA3P42263 894 aa12.47□□□□□ -0.41
SF3B3-202ENST00000562722 CDH17Q12864 832 aa12.47□□□□□ -0.41
SF3B3-202ENST00000562722 TMED2Q15363 201 aa12.47□□□□□ -0.41
SF3B3-202ENST00000562722 SF1Q15637 639 aaKnown RBP12.47□□□□□ -0.41
SF3B3-202ENST00000562722 RBBP7Q16576 425 aa12.47□□□□□ -0.41
SF3B3-202ENST00000562722 FASTKD1Q53R41 847 aaKnown RBP12.47□□□□□ -0.41
SF3B3-202ENST00000562722 ZC3H12BQ5HYM0 836 aaKnown RBP12.47□□□□□ -0.41
SF3B3-202ENST00000562722 AGAP7PQ5VUJ5 663 aa12.47□□□□□ -0.41
SF3B3-202ENST00000562722 PRAMEF13Q5VWM6 474 aa12.47□□□□□ -0.41
SF3B3-202ENST00000562722 KIAA1328Q86T90 577 aa12.47□□□□□ -0.41
SF3B3-202ENST00000562722 DCUN1D3Q8IWE4 304 aa12.47□□□□□ -0.41
SF3B3-202ENST00000562722 SLC22A15Q8IZD6 547 aa12.47□□□□□ -0.41
SF3B3-202ENST00000562722 GSDMBQ8TAX9 411 aa12.47□□□□□ -0.41
SF3B3-202ENST00000562722 DNAJB14Q8TBM8 379 aa12.47□□□□□ -0.41
SF3B3-202ENST00000562722 SKA2Q8WVK7 121 aaPredicted RBP12.47□□□□□ -0.41
SF3B3-202ENST00000562722 FKBP10Q96AY3 582 aa12.47□□□□□ -0.41
SF3B3-202ENST00000562722 AGAP4Q96P64 663 aa12.47□□□□□ -0.41
SF3B3-202ENST00000562722 IL17FQ96PD4 163 aa12.47□□□□□ -0.41
SF3B3-202ENST00000562722 SOX17Q9H6I2 414 aaPredicted RBP12.47□□□□□ -0.41
SF3B3-202ENST00000562722 SLC22A11Q9NSA0 550 aa12.47□□□□□ -0.41
SF3B3-202ENST00000562722 CUTCQ9NTM9 273 aa12.47□□□□□ -0.41
SF3B3-202ENST00000562722 SLC2A6Q9UGQ3 507 aa12.47□□□□□ -0.41
SF3B3-202ENST00000562722 PACSIN2Q9UNF0 486 aaPredicted RBP12.47□□□□□ -0.41
SF3B3-202ENST00000562722 NTNG1Q9Y2I2 539 aa12.47□□□□□ -0.41
SF3B3-202ENST00000562722 R3HDM2Q9Y2K5 976 aaKnown RBP12.47□□□□□ -0.41
SF3B3-202ENST00000562722 PIKFYVEQ9Y2I7 2098 aa12.46□□□□□ -0.41
SF3B3-202ENST00000562722 WIPF3A6NGB9 483 aa12.46□□□□□ -0.41
SF3B3-202ENST00000562722 DSCR3O14972 297 aa12.46□□□□□ -0.41
SF3B3-202ENST00000562722 S1PR4O95977 384 aa12.46□□□□□ -0.41
SF3B3-202ENST00000562722 IFNB1P01574 187 aa12.46□□□□□ -0.41
SF3B3-202ENST00000562722 MCM3P25205 808 aa12.46□□□□□ -0.41
SF3B3-202ENST00000562722 SOX8P57073 446 aa12.46□□□□□ -0.41
SF3B3-202ENST00000562722 PRAMEP78395 509 aa12.46□□□□□ -0.41
SF3B3-202ENST00000562722 CDC16Q13042 620 aa12.46□□□□□ -0.41
SF3B3-202ENST00000562722 GRM7Q14831 915 aa12.46□□□□□ -0.41
SF3B3-202ENST00000562722 TUBB8Q3ZCM7 444 aa12.46□□□□□ -0.41
SF3B3-202ENST00000562722 TSTD2Q5T7W7 516 aa12.46□□□□□ -0.41
SF3B3-202ENST00000562722 TTC23LQ6PF05 361 aa12.46□□□□□ -0.41
SF3B3-202ENST00000562722 OVCH1Q7RTY7 1134 aa12.46□□□□□ -0.41
SF3B3-202ENST00000562722 VRK3Q8IV63 474 aa12.46□□□□□ -0.41
SF3B3-202ENST00000562722 PARP9Q8IXQ6 854 aa12.46□□□□□ -0.41
SF3B3-202ENST00000562722 SYCE1Q8N0S2 351 aa12.46□□□□□ -0.41
SF3B3-202ENST00000562722 LRRC57Q8N9N7 239 aa12.46□□□□□ -0.41
SF3B3-202ENST00000562722 LINC01555Q8NAE3 123 aa12.46□□□□□ -0.41
SF3B3-202ENST00000562722 ACRBPQ8NEB7 543 aa12.46□□□□□ -0.41
SF3B3-202ENST00000562722 OR13J1Q8NGT2 312 aa12.46□□□□□ -0.41
SF3B3-202ENST00000562722 OR4L1Q8NH43 312 aa12.46□□□□□ -0.41
SF3B3-202ENST00000562722 PPP4R1Q8TF05 950 aa12.46□□□□□ -0.41
SF3B3-202ENST00000562722 ASZ1Q8WWH4 475 aa12.46□□□□□ -0.41
SF3B3-202ENST00000562722 NACC2Q96BF6 587 aa12.46□□□□□ -0.41
SF3B3-202ENST00000562722 VPS50Q96JG6 964 aa12.46□□□□□ -0.41
SF3B3-202ENST00000562722 PANX2Q96RD6 677 aa12.46□□□□□ -0.41
SF3B3-202ENST00000562722 SELENOSQ9BQE4 189 aa12.46□□□□□ -0.41
SF3B3-202ENST00000562722 LACRTQ9GZZ8 138 aa12.46□□□□□ -0.41
SF3B3-202ENST00000562722 EPS8L2Q9H6S3 715 aa12.46□□□□□ -0.41
SF3B3-202ENST00000562722 WDR54Q9H977 334 aa12.46□□□□□ -0.41
SF3B3-202ENST00000562722 MRM3Q9HC36 420 aaKnown RBP12.46□□□□□ -0.41
SF3B3-202ENST00000562722 ANAPC5Q9UJX4 755 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms