RNA–Protein interactions for RNA: ENST00000561960.5

NSMCE1-202, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE1, Length 609 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-202ENST00000561960 TBL1YQ9BQ87 522 aa11.21□□□□□ -0.61
NSMCE1-202ENST00000561960 PLCL2Q9UPR0 1127 aa11.21□□□□□ -0.61
NSMCE1-202ENST00000561960 AP1M2Q9Y6Q5 423 aa11.21□□□□□ -0.61
NSMCE1-202ENST00000561960 HEATR5BQ9P2D3 2071 aa11.21□□□□□ -0.62
NSMCE1-202ENST00000561960 VPS13CQ709C8 3753 aa11.2□□□□□ -0.62
NSMCE1-202ENST00000561960 BHMG1C9JSJ3 638 aaPredicted RBP11.2□□□□□ -0.62
NSMCE1-202ENST00000561960 GOLGA6L22H0YM25 854 aa11.2□□□□□ -0.62
NSMCE1-202ENST00000561960 C19orf84I3L1E1 186 aa11.2□□□□□ -0.62
NSMCE1-202ENST00000561960 KCNN4O15554 427 aa11.2□□□□□ -0.62
NSMCE1-202ENST00000561960 OR1I1O60431 355 aa11.2□□□□□ -0.62
NSMCE1-202ENST00000561960 UNC5CO95185 931 aa11.2□□□□□ -0.62
NSMCE1-202ENST00000561960 CRTAMO95727 393 aa11.2□□□□□ -0.62
NSMCE1-202ENST00000561960 MBD3O95983 291 aa11.2□□□□□ -0.62
NSMCE1-202ENST00000561960 MMP11P24347 488 aa11.2□□□□□ -0.62
NSMCE1-202ENST00000561960 SHMT2P34897 504 aa11.2□□□□□ -0.62
NSMCE1-202ENST00000561960 TSFMP43897 325 aaKnown RBP11.2□□□□□ -0.62
NSMCE1-202ENST00000561960 VSX2P58304 361 aaPredicted RBP11.2□□□□□ -0.62
NSMCE1-202ENST00000561960 ARG2P78540 354 aa11.2□□□□□ -0.62
NSMCE1-202ENST00000561960 OTUD4Q01804 1114 aaKnown RBP11.2□□□□□ -0.62
NSMCE1-202ENST00000561960 MSLNQ13421 630 aaPredicted RBP11.2□□□□□ -0.62
NSMCE1-202ENST00000561960 ZXDCQ2QGD7 858 aaPredicted RBP11.2□□□□□ -0.62
NSMCE1-202ENST00000561960 TFDP3Q5H9I0 405 aa11.2□□□□□ -0.62
NSMCE1-202ENST00000561960 ANKRD20A2Q5SQ80 823 aa11.2□□□□□ -0.62
NSMCE1-202ENST00000561960 ANKRD20A1Q5TYW2 823 aa11.2□□□□□ -0.62
NSMCE1-202ENST00000561960 ANKRD20A3Q5VUR7 823 aa11.2□□□□□ -0.62
NSMCE1-202ENST00000561960 B3GNTL1Q67FW5 361 aaPredicted RBP11.2□□□□□ -0.62
NSMCE1-202ENST00000561960 DENND5AQ6IQ26 1287 aa11.2□□□□□ -0.62
NSMCE1-202ENST00000561960 GFRALQ6UXV0 394 aa11.2□□□□□ -0.62
NSMCE1-202ENST00000561960 RANBP10Q6VN20 620 aa11.2□□□□□ -0.62
NSMCE1-202ENST00000561960 MCATQ8IVS2 390 aaKnown RBP11.2□□□□□ -0.62
NSMCE1-202ENST00000561960 SLC34A3Q8N130 599 aa11.2□□□□□ -0.62
NSMCE1-202ENST00000561960 LINC01555Q8NAE3 123 aa11.2□□□□□ -0.62
NSMCE1-202ENST00000561960 OR11G2Q8NGC1 345 aa11.2□□□□□ -0.62
NSMCE1-202ENST00000561960 LKAAEAR1Q8TD35 194 aa11.2□□□□□ -0.62
NSMCE1-202ENST00000561960 DTX3LQ8TDB6 740 aa11.2□□□□□ -0.62
NSMCE1-202ENST00000561960 BRIX1Q8TDN6 353 aaKnown RBP11.2□□□□□ -0.62
NSMCE1-202ENST00000561960 CCDC120Q96HB5 630 aa11.2□□□□□ -0.62
NSMCE1-202ENST00000561960 LURAP1Q96LR2 239 aa11.2□□□□□ -0.62
NSMCE1-202ENST00000561960 SLX1AQ9BQ83 275 aa11.2□□□□□ -0.62
NSMCE1-202ENST00000561960 C17orf62Q9BQA9 187 aa11.2□□□□□ -0.62
NSMCE1-202ENST00000561960 LHPPQ9H008 270 aa11.2□□□□□ -0.62
NSMCE1-202ENST00000561960 EPS8L2Q9H6S3 715 aa11.2□□□□□ -0.62
NSMCE1-202ENST00000561960 CUTCQ9NTM9 273 aa11.2□□□□□ -0.62
NSMCE1-202ENST00000561960 CAMSAP3Q9P1Y5 1249 aaPredicted RBP11.2□□□□□ -0.62
NSMCE1-202ENST00000561960 RUVBL2Q9Y230 463 aaKnown RBP11.2□□□□□ -0.62
NSMCE1-202ENST00000561960 A0A1B0GX78 115 aa11.19□□□□□ -0.62
NSMCE1-202ENST00000561960 C5orf60A6NFR6 353 aa11.19□□□□□ -0.62
NSMCE1-202ENST00000561960 IQCF5A8MTL0 148 aa11.19□□□□□ -0.62
NSMCE1-202ENST00000561960 CCL21O00585 134 aa11.19□□□□□ -0.62
NSMCE1-202ENST00000561960 STATHP02808 62 aa11.19□□□□□ -0.62
NSMCE1-202ENST00000561960 EIF2S1P05198 315 aaKnown RBP11.19□□□□□ -0.62
NSMCE1-202ENST00000561960 STSP08842 583 aa11.19□□□□□ -0.62
NSMCE1-202ENST00000561960 MST1P26927 711 aa11.19□□□□□ -0.62
NSMCE1-202ENST00000561960 ACADLP28330 430 aa11.19□□□□□ -0.62
NSMCE1-202ENST00000561960 HTR1EP28566 365 aa11.19□□□□□ -0.62
NSMCE1-202ENST00000561960 TDGF1P3P51864 188 aa11.19□□□□□ -0.62
NSMCE1-202ENST00000561960 RIPPLY3P57055 190 aa11.19□□□□□ -0.62
NSMCE1-202ENST00000561960 YBX1P67809 324 aaKnown RBP11.19□□□□□ -0.62
NSMCE1-202ENST00000561960 GTF3C1Q12789 2109 aa11.19□□□□□ -0.62
NSMCE1-202ENST00000561960 TAZQ16635 292 aa11.19□□□□□ -0.62
NSMCE1-202ENST00000561960 FCRL6Q6DN72 434 aa11.19□□□□□ -0.62
NSMCE1-202ENST00000561960 FRMPD2BQ6IN97 320 aa11.19□□□□□ -0.62
NSMCE1-202ENST00000561960 TLDC1Q6P9B6 456 aa11.19□□□□□ -0.62
NSMCE1-202ENST00000561960 ZNF449Q6P9G9 518 aa11.19□□□□□ -0.62
NSMCE1-202ENST00000561960 DARS2Q6PI48 645 aaKnown RBP11.19□□□□□ -0.62
NSMCE1-202ENST00000561960 BZW1Q7L1Q6 419 aaKnown RBP11.19□□□□□ -0.62
NSMCE1-202ENST00000561960 OVCH1Q7RTY7 1134 aa11.19□□□□□ -0.62
NSMCE1-202ENST00000561960 LAPTM4BQ86VI4 370 aa11.19□□□□□ -0.62
NSMCE1-202ENST00000561960 SPNS2Q8IVW8 549 aa11.19□□□□□ -0.62
NSMCE1-202ENST00000561960 SHISA5Q8N114 240 aa11.19□□□□□ -0.62
NSMCE1-202ENST00000561960 TBRG4Q969Z0 631 aaKnown RBP eCLIP11.19□□□□□ -0.62
NSMCE1-202ENST00000561960 CRB3Q9BUF7 120 aa11.19□□□□□ -0.62
NSMCE1-202ENST00000561960 YIPF2Q9BWQ6 316 aa11.19□□□□□ -0.62
NSMCE1-202ENST00000561960 TSPAN10Q9H1Z9 355 aaPredicted RBP11.19□□□□□ -0.62
NSMCE1-202ENST00000561960 NHEJ1Q9H9Q4 299 aaPredicted RBP11.19□□□□□ -0.62
NSMCE1-202ENST00000561960 R3HDM2Q9Y2K5 976 aaKnown RBP11.19□□□□□ -0.62
NSMCE1-202ENST00000561960 ALG6Q9Y672 507 aa11.19□□□□□ -0.62
NSMCE1-202ENST00000561960 NCOA6Q14686 2063 aaPredicted RBP11.19□□□□□ -0.62
NSMCE1-202ENST00000561960 MTORP42345 2549 aa11.18□□□□□ -0.62
NSMCE1-202ENST00000561960 IGLV3-16A0A075B6K0 115 aa11.18□□□□□ -0.62
NSMCE1-202ENST00000561960 C17orf113A0A1B0GUU1 675 aa11.18□□□□□ -0.62
NSMCE1-202ENST00000561960 AGAP14A8MT82 685 aa11.18□□□□□ -0.62
NSMCE1-202ENST00000561960 DSCR3O14972 297 aa11.18□□□□□ -0.62
NSMCE1-202ENST00000561960 ANXA9O76027 345 aa11.18□□□□□ -0.62
NSMCE1-202ENST00000561960 IGHEP01854 428 aa11.18□□□□□ -0.62
NSMCE1-202ENST00000561960 PYGMP11217 842 aa11.18□□□□□ -0.62
NSMCE1-202ENST00000561960 PKLRP30613 574 aa11.18□□□□□ -0.62
NSMCE1-202ENST00000561960 BDKRB1P46663 353 aa11.18□□□□□ -0.62
NSMCE1-202ENST00000561960 CD151P48509 253 aa11.18□□□□□ -0.62
NSMCE1-202ENST00000561960 SOX8P57073 446 aa11.18□□□□□ -0.62
NSMCE1-202ENST00000561960 EIF3EP60228 445 aaKnown RBP11.18□□□□□ -0.62
NSMCE1-202ENST00000561960 TPM4P67936 248 aa11.18□□□□□ -0.62
NSMCE1-202ENST00000561960 KLC1Q07866 573 aa11.18□□□□□ -0.62
NSMCE1-202ENST00000561960 TLR1Q15399 786 aa11.18□□□□□ -0.62
NSMCE1-202ENST00000561960 KCTD19Q17RG1 926 aaPredicted RBP11.18□□□□□ -0.62
NSMCE1-202ENST00000561960 CCSMST1Q4G0I0 132 aa11.18□□□□□ -0.62
NSMCE1-202ENST00000561960 VWA2Q5GFL6 755 aa11.18□□□□□ -0.62
NSMCE1-202ENST00000561960 LRRC38Q5VT99 294 aa11.18□□□□□ -0.62
NSMCE1-202ENST00000561960 IGFL2Q6UWQ7 119 aa11.18□□□□□ -0.62
NSMCE1-202ENST00000561960 ISLR2Q6UXK2 745 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms