RNA–Protein interactions for RNA: ENST00000561076.1

RTF1-207, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 3

Gene RTF1, Length 314 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-207ENST00000561076 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP1.98□□□□□ -2.09
RTF1-207ENST00000561076 ZNF595Q8IYB9 648 aa1.98□□□□□ -2.09
RTF1-207ENST00000561076 LRRC56Q8IYG6 542 aaPredicted RBP1.98□□□□□ -2.09
RTF1-207ENST00000561076 ZDHHC23Q8IYP9 409 aa1.98□□□□□ -2.09
RTF1-207ENST00000561076 ZNF444Q8N0Y2 327 aaPredicted RBP1.98□□□□□ -2.09
RTF1-207ENST00000561076 CERS5Q8N5B7 392 aa1.98□□□□□ -2.09
RTF1-207ENST00000561076 RNF148Q8N7C7 305 aa1.98□□□□□ -2.09
RTF1-207ENST00000561076 CEP112Q8N8E3 955 aa1.98□□□□□ -2.09
RTF1-207ENST00000561076 ZNF321PQ8N8H1 164 aa1.98□□□□□ -2.09
RTF1-207ENST00000561076 FADS6Q8N9I5 356 aa1.98□□□□□ -2.09
RTF1-207ENST00000561076 FAM71CQ8NEG0 241 aa1.98□□□□□ -2.09
RTF1-207ENST00000561076 OR52B4Q8NGK2 314 aa1.98□□□□□ -2.09
RTF1-207ENST00000561076 OR52J3Q8NH60 311 aa1.98□□□□□ -2.09
RTF1-207ENST00000561076 OR4A16Q8NH70 328 aa1.98□□□□□ -2.09
RTF1-207ENST00000561076 OCC1Q8TAD7 63 aa1.98□□□□□ -2.09
RTF1-207ENST00000561076 FAM81AQ8TBF8 368 aa1.98□□□□□ -2.09
RTF1-207ENST00000561076 TRMT10AQ8TBZ6 339 aaKnown RBP1.98□□□□□ -2.09
RTF1-207ENST00000561076 SUN5Q8TC36 379 aa1.98□□□□□ -2.09
RTF1-207ENST00000561076 PNPT1Q8TCS8 783 aaKnown RBP1.98□□□□□ -2.09
RTF1-207ENST00000561076 TAS1R2Q8TE23 839 aa1.98□□□□□ -2.09
RTF1-207ENST00000561076 SLC20A1Q8WUM9 679 aa1.98□□□□□ -2.09
RTF1-207ENST00000561076 CACTINQ8WUQ7 758 aaKnown RBP1.98□□□□□ -2.09
RTF1-207ENST00000561076 DNAJA4Q8WW22 397 aaPredicted RBP1.98□□□□□ -2.09
RTF1-207ENST00000561076 PROX1Q92786 737 aa1.98□□□□□ -2.09
RTF1-207ENST00000561076 INPP5DQ92835 1189 aa1.98□□□□□ -2.09
RTF1-207ENST00000561076 CAVIN3Q969G5 261 aa1.98□□□□□ -2.09
RTF1-207ENST00000561076 FAM46BQ96A09 425 aa1.98□□□□□ -2.09
RTF1-207ENST00000561076 ESAMQ96AP7 390 aa1.98□□□□□ -2.09
RTF1-207ENST00000561076 RHBDF1Q96CC6 855 aa1.98□□□□□ -2.09
RTF1-207ENST00000561076 CTHRC1Q96CG8 243 aa1.98□□□□□ -2.09
RTF1-207ENST00000561076 ORAI1Q96D31 301 aa1.98□□□□□ -2.09
RTF1-207ENST00000561076 MRPL38Q96DV4 380 aaKnown RBP1.98□□□□□ -2.09
RTF1-207ENST00000561076 DAZAP1Q96EP5 407 aaKnown RBP1.98□□□□□ -2.09
RTF1-207ENST00000561076 NRBF2Q96F24 287 aa1.98□□□□□ -2.09
RTF1-207ENST00000561076 ZNF333Q96JL9 665 aa1.98□□□□□ -2.09
RTF1-207ENST00000561076 EGLN2Q96KS0 407 aa1.98□□□□□ -2.09
RTF1-207ENST00000561076 ZNF48Q96MX3 618 aaPredicted RBP1.98□□□□□ -2.09
RTF1-207ENST00000561076 SPATA33Q96N06 139 aa1.98□□□□□ -2.09
RTF1-207ENST00000561076 FAM210AQ96ND0 272 aa1.98□□□□□ -2.09
RTF1-207ENST00000561076 MUS81Q96NY9 551 aa1.98□□□□□ -2.09
RTF1-207ENST00000561076 FCRL4Q96PJ5 515 aa1.98□□□□□ -2.09
RTF1-207ENST00000561076 OR6C1Q96RD1 312 aa1.98□□□□□ -2.09
RTF1-207ENST00000561076 USP28Q96RU2 1077 aa1.98□□□□□ -2.09
RTF1-207ENST00000561076 MMS19Q96T76 1030 aa1.98□□□□□ -2.09
RTF1-207ENST00000561076 COQ7Q99807 217 aa1.98□□□□□ -2.09
RTF1-207ENST00000561076 GAL3ST1Q99999 423 aa1.98□□□□□ -2.09
RTF1-207ENST00000561076 PIGQQ9BRB3 760 aa1.98□□□□□ -2.09
RTF1-207ENST00000561076 ALG12Q9BV10 488 aa1.98□□□□□ -2.09
RTF1-207ENST00000561076 CDK19Q9BWU1 502 aa1.98□□□□□ -2.09
RTF1-207ENST00000561076 PLA2G12BQ9BX93 195 aa1.98□□□□□ -2.09
RTF1-207ENST00000561076 FTHL17Q9BXU8 183 aa1.98□□□□□ -2.09
RTF1-207ENST00000561076 NMNAT2Q9BZQ4 307 aa1.98□□□□□ -2.09
RTF1-207ENST00000561076 LHPPQ9H008 270 aa1.98□□□□□ -2.09
RTF1-207ENST00000561076 EHD1Q9H4M9 534 aa1.98□□□□□ -2.09
RTF1-207ENST00000561076 MAGIXQ9H6Y5 334 aa1.98□□□□□ -2.09
RTF1-207ENST00000561076 EXO5Q9H790 373 aa1.98□□□□□ -2.09
RTF1-207ENST00000561076 RNF121Q9H920 327 aa1.98□□□□□ -2.09
RTF1-207ENST00000561076 MARCH7Q9H992 704 aa1.98□□□□□ -2.09
RTF1-207ENST00000561076 MEAF6Q9HAF1 191 aa1.98□□□□□ -2.09
RTF1-207ENST00000561076 LMAN1LQ9HAT1 526 aa1.98□□□□□ -2.09
RTF1-207ENST00000561076 HHATLQ9HCP6 504 aa1.98□□□□□ -2.09
RTF1-207ENST00000561076 WDR6Q9NNW5 1121 aaKnown RBP1.98□□□□□ -2.09
RTF1-207ENST00000561076 YAE1D1Q9NRH1 226 aa1.98□□□□□ -2.09
RTF1-207ENST00000561076 KLC4Q9NSK0 619 aa1.98□□□□□ -2.09
RTF1-207ENST00000561076 ACSS1Q9NUB1 689 aaPredicted RBP1.98□□□□□ -2.09
RTF1-207ENST00000561076 PIGVQ9NUD9 493 aa1.98□□□□□ -2.09
RTF1-207ENST00000561076 PANK4Q9NVE7 773 aa1.98□□□□□ -2.09
RTF1-207ENST00000561076 C19orf73Q9NVV2 129 aa1.98□□□□□ -2.09
RTF1-207ENST00000561076 HYPKQ9NX55 129 aa1.98□□□□□ -2.09
RTF1-207ENST00000561076 P4HTMQ9NXG6 502 aa1.98□□□□□ -2.09
RTF1-207ENST00000561076 UBAP1Q9NZ09 502 aa1.98□□□□□ -2.09
RTF1-207ENST00000561076 RHCGQ9UBD6 479 aa1.98□□□□□ -2.09
RTF1-207ENST00000561076 RNF14Q9UBS8 474 aa1.98□□□□□ -2.09
RTF1-207ENST00000561076 SEC14L3Q9UDX4 400 aa1.98□□□□□ -2.09
RTF1-207ENST00000561076 BCAP29Q9UHQ4 241 aa1.98□□□□□ -2.09
RTF1-207ENST00000561076 ADAMTS6Q9UKP5 1117 aa1.98□□□□□ -2.09
RTF1-207ENST00000561076 RNF150Q9ULK6 438 aa1.98□□□□□ -2.09
RTF1-207ENST00000561076 ADAMTS5Q9UNA0 930 aa1.98□□□□□ -2.09
RTF1-207ENST00000561076 GPR132Q9UNW8 380 aa1.98□□□□□ -2.09
RTF1-207ENST00000561076 FOXA2Q9Y261 457 aaPredicted RBP1.98□□□□□ -2.09
RTF1-207ENST00000561076 MAP3K2Q9Y2U5 619 aa1.98□□□□□ -2.09
RTF1-207ENST00000561076 HBS1LQ9Y450 684 aaKnown RBP1.98□□□□□ -2.09
RTF1-207ENST00000561076 OR10H1Q9Y4A9 318 aa1.98□□□□□ -2.09
RTF1-207ENST00000561076 TMEM184BQ9Y519 407 aaPredicted RBP1.98□□□□□ -2.09
RTF1-207ENST00000561076 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP1.98□□□□□ -2.09
RTF1-207ENST00000561076 NCAPD2Q15021 1401 aa1.98□□□□□ -2.09
RTF1-207ENST00000561076 FER1L4A9Z1Z3 1794 aa1.98□□□□□ -2.09
RTF1-207ENST00000561076 EIF4G1Q04637 1599 aaKnown RBP1.98□□□□□ -2.09
RTF1-207ENST00000561076 ABCC4O15439 1325 aa1.97□□□□□ -2.09
RTF1-207ENST00000561076 KIF7Q2M1P5 1343 aa1.97□□□□□ -2.09
RTF1-207ENST00000561076 SPATA31A5Q5VU36 1347 aa1.97□□□□□ -2.09
RTF1-207ENST00000561076 SPATA31A6Q5VVP1 1343 aa1.97□□□□□ -2.09
RTF1-207ENST00000561076 SPATA31A7Q8IWB4 1347 aa1.97□□□□□ -2.09
RTF1-207ENST00000561076 A0A0U1RQJ8 604 aa1.97□□□□□ -2.09
RTF1-207ENST00000561076 LOC100653049A0A140TA62 436 aa1.97□□□□□ -2.09
RTF1-207ENST00000561076 TEX51A0A1B0GUA7 166 aa1.97□□□□□ -2.09
RTF1-207ENST00000561076 SERTM2A0A1B0GWG4 89 aa1.97□□□□□ -2.09
RTF1-207ENST00000561076 ERICH2A1L162 156 aa1.97□□□□□ -2.09
RTF1-207ENST00000561076 MAGEB16A2A368 324 aa1.97□□□□□ -2.09
RTF1-207ENST00000561076 HEATR9A2RTY3 570 aa1.97□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms