RNA–Protein interactions for RNA: ENST00000560715.5

TSPAN3-209, Transcript of tetraspanin 3, humanhuman

TSL 2

Gene TSPAN3, Length 2,892 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-209ENST00000560715 THRSPQ92748 146 aa6.59□□□□□ -1.35
TSPAN3-209ENST00000560715 HOXB13Q92826 284 aaPredicted RBP6.59□□□□□ -1.35
TSPAN3-209ENST00000560715 SLC35C1Q96A29 364 aa6.59□□□□□ -1.35
TSPAN3-209ENST00000560715 CTDSP1Q9GZU7 261 aa6.59□□□□□ -1.35
TSPAN3-209ENST00000560715 SERHL2Q9H4I8 314 aa6.59□□□□□ -1.35
TSPAN3-209ENST00000560715 DUS2Q9NX74 493 aaKnown RBP6.59□□□□□ -1.35
TSPAN3-209ENST00000560715 MTMR4Q9NYA4 1195 aa6.59□□□□□ -1.35
TSPAN3-209ENST00000560715 KCND2Q9NZV8 630 aa6.59□□□□□ -1.35
TSPAN3-209ENST00000560715 CAB39Q9Y376 341 aaPredicted RBP6.59□□□□□ -1.35
TSPAN3-209ENST00000560715 KDM3AQ9Y4C1 1321 aa6.59□□□□□ -1.35
TSPAN3-209ENST00000560715 LOC100653049A0A140TA62 436 aa6.59□□□□□ -1.35
TSPAN3-209ENST00000560715 SMCO2A6NFE2 343 aa6.59□□□□□ -1.35
TSPAN3-209ENST00000560715 BET1O15155 118 aa6.59□□□□□ -1.35
TSPAN3-209ENST00000560715 ST8SIA3O43173 380 aa6.59□□□□□ -1.35
TSPAN3-209ENST00000560715 CCNKO75909 580 aa6.59□□□□□ -1.35
TSPAN3-209ENST00000560715 KRT34O76011 436 aa6.59□□□□□ -1.35
TSPAN3-209ENST00000560715 URODP06132 367 aa6.59□□□□□ -1.35
TSPAN3-209ENST00000560715 COX4I1P13073 169 aa6.59□□□□□ -1.35
TSPAN3-209ENST00000560715 SDHBP21912 280 aa6.59□□□□□ -1.35
TSPAN3-209ENST00000560715 DNASE1P24855 282 aa6.59□□□□□ -1.35
TSPAN3-209ENST00000560715 PTPN9P43378 593 aa6.59□□□□□ -1.35
TSPAN3-209ENST00000560715 HCAR3P49019 387 aa6.59□□□□□ -1.35
TSPAN3-209ENST00000560715 ZNF81P51508 661 aa6.59□□□□□ -1.35
TSPAN3-209ENST00000560715 PRAMEP78395 509 aa6.59□□□□□ -1.35
TSPAN3-209ENST00000560715 PEX6Q13608 980 aa6.59□□□□□ -1.35
TSPAN3-209ENST00000560715 TMEM119Q4V9L6 283 aa6.59□□□□□ -1.35
TSPAN3-209ENST00000560715 ASPRV1Q53RT3 343 aa6.59□□□□□ -1.35
TSPAN3-209ENST00000560715 PIGGQ5H8A4 983 aa6.59□□□□□ -1.35
TSPAN3-209ENST00000560715 TOR1AIP1Q5JTV8 583 aa6.59□□□□□ -1.35
TSPAN3-209ENST00000560715 STRIP1Q5VSL9 837 aa6.59□□□□□ -1.35
TSPAN3-209ENST00000560715 CACHD1Q5VU97 1274 aa6.59□□□□□ -1.35
TSPAN3-209ENST00000560715 APOBEC3HQ6NTF7 200 aaKnown RBP6.59□□□□□ -1.35
TSPAN3-209ENST00000560715 CDC42EP5Q6NZY7 148 aa6.59□□□□□ -1.35
TSPAN3-209ENST00000560715 METTL2BQ6P1Q9 378 aaKnown RBP6.59□□□□□ -1.35
TSPAN3-209ENST00000560715 FAM83HQ6ZRV2 1179 aaPredicted RBP6.59□□□□□ -1.35
TSPAN3-209ENST00000560715 ADGRF2Q8IZF7 708 aa6.59□□□□□ -1.35
TSPAN3-209ENST00000560715 MFSD4AQ8N468 514 aa6.59□□□□□ -1.35
TSPAN3-209ENST00000560715 OR5H6Q8NGV6 325 aa6.59□□□□□ -1.35
TSPAN3-209ENST00000560715 ZNF671Q8TAW3 534 aa6.59□□□□□ -1.35
TSPAN3-209ENST00000560715 ZNF564Q8TBZ8 553 aaPredicted RBP6.59□□□□□ -1.35
TSPAN3-209ENST00000560715 RNASE8Q8TDE3 154 aaKnown RBP6.59□□□□□ -1.35
TSPAN3-209ENST00000560715 BTBD6Q96KE9 485 aa6.59□□□□□ -1.35
TSPAN3-209ENST00000560715 KLHL15Q96M94 604 aa6.59□□□□□ -1.35
TSPAN3-209ENST00000560715 KLHL32Q96NJ5 620 aa6.59□□□□□ -1.35
TSPAN3-209ENST00000560715 TMEM246Q9BRR3 403 aa6.59□□□□□ -1.35
TSPAN3-209ENST00000560715 MTG1Q9BT17 334 aaPredicted RBP6.59□□□□□ -1.35
TSPAN3-209ENST00000560715 C20orf27Q9GZN8 174 aa6.59□□□□□ -1.35
TSPAN3-209ENST00000560715 RIOX1Q9H6W3 641 aa6.59□□□□□ -1.35
TSPAN3-209ENST00000560715 ZNF552Q9H707 407 aaPredicted RBP6.59□□□□□ -1.35
TSPAN3-209ENST00000560715 C6orf50Q9HD87 102 aa6.59□□□□□ -1.35
TSPAN3-209ENST00000560715 PKD2L2Q9NZM6 624 aa6.59□□□□□ -1.35
TSPAN3-209ENST00000560715 IL19Q9UHD0 177 aa6.59□□□□□ -1.35
TSPAN3-209ENST00000560715 ZNF221Q9UK13 617 aa6.59□□□□□ -1.35
TSPAN3-209ENST00000560715 TCFL5Q9UL49 500 aa6.59□□□□□ -1.35
TSPAN3-209ENST00000560715 TCAF1Q9Y4C2 921 aa6.59□□□□□ -1.35
TSPAN3-209ENST00000560715 SIPA1L1O43166 1804 aa6.59□□□□□ -1.35
TSPAN3-209ENST00000560715 A0A1W2PQ72 361 aa6.59□□□□□ -1.36
TSPAN3-209ENST00000560715 NCF1BA6NI72 391 aaPredicted RBP6.59□□□□□ -1.36
TSPAN3-209ENST00000560715 NCF1CA8MVU1 366 aaPredicted RBP6.59□□□□□ -1.36
TSPAN3-209ENST00000560715 FAM25AB3EWG3 89 aa6.59□□□□□ -1.36
TSPAN3-209ENST00000560715 FAM25CB3EWG5 89 aa6.59□□□□□ -1.36
TSPAN3-209ENST00000560715 FAM25GB3EWG6 89 aa6.59□□□□□ -1.36
TSPAN3-209ENST00000560715 ATP6V1G2-DDX39BF2Z307 99 aa6.59□□□□□ -1.36
TSPAN3-209ENST00000560715 M0QYG6 137 aa6.59□□□□□ -1.36
TSPAN3-209ENST00000560715 QSOX1O00391 747 aa6.59□□□□□ -1.36
TSPAN3-209ENST00000560715 COPEO14579 308 aa6.59□□□□□ -1.36
TSPAN3-209ENST00000560715 TSPAN4O14817 238 aa6.59□□□□□ -1.36
TSPAN3-209ENST00000560715 HDAC3O15379 428 aa6.59□□□□□ -1.36
TSPAN3-209ENST00000560715 SEC14L2O76054 403 aa6.59□□□□□ -1.36
TSPAN3-209ENST00000560715 TOMM70O94826 608 aa6.59□□□□□ -1.36
TSPAN3-209ENST00000560715 MFN2O95140 757 aa6.59□□□□□ -1.36
TSPAN3-209ENST00000560715 TRIM16O95361 564 aa6.59□□□□□ -1.36
TSPAN3-209ENST00000560715 RPLP2P05387 115 aaKnown RBP6.59□□□□□ -1.36
TSPAN3-209ENST00000560715 HLA-DOAP06340 250 aa6.59□□□□□ -1.36
TSPAN3-209ENST00000560715 SNHG28P0DPA3 235 aa6.59□□□□□ -1.36
TSPAN3-209ENST00000560715 ICAM2P13598 275 aa6.59□□□□□ -1.36
TSPAN3-209ENST00000560715 CCR1P32246 355 aa6.59□□□□□ -1.36
TSPAN3-209ENST00000560715 SOX6P35712 828 aa6.59□□□□□ -1.36
TSPAN3-209ENST00000560715 POU6F2P78424 691 aaPredicted RBP6.59□□□□□ -1.36
TSPAN3-209ENST00000560715 MRPS15P82914 257 aaKnown RBP6.59□□□□□ -1.36
TSPAN3-209ENST00000560715 CD69Q07108 199 aa6.59□□□□□ -1.36
TSPAN3-209ENST00000560715 LMAN2Q12907 356 aa6.59□□□□□ -1.36
TSPAN3-209ENST00000560715 GPS1Q13098 491 aa6.59□□□□□ -1.36
TSPAN3-209ENST00000560715 ORC2Q13416 577 aaPredicted RBP6.59□□□□□ -1.36
TSPAN3-209ENST00000560715 CAMK1Q14012 370 aa6.59□□□□□ -1.36
TSPAN3-209ENST00000560715 TYSND1Q2T9J0 566 aa6.59□□□□□ -1.36
TSPAN3-209ENST00000560715 MOXD1Q6UVY6 613 aa6.59□□□□□ -1.36
TSPAN3-209ENST00000560715 C16orf89Q6UX73 402 aa6.59□□□□□ -1.36
TSPAN3-209ENST00000560715 MAMDC4Q6UXC1 1216 aa6.59□□□□□ -1.36
TSPAN3-209ENST00000560715 GSTA5Q7RTV2 222 aa6.59□□□□□ -1.36
TSPAN3-209ENST00000560715 NEK8Q86SG6 692 aa6.59□□□□□ -1.36
TSPAN3-209ENST00000560715 CATSPER3Q86XQ3 398 aa6.59□□□□□ -1.36
TSPAN3-209ENST00000560715 CADM2Q8N3J6 435 aa6.59□□□□□ -1.36
TSPAN3-209ENST00000560715 ZCCHC7Q8N3Z6 543 aaKnown RBP6.59□□□□□ -1.36
TSPAN3-209ENST00000560715 MFSD2AQ8NA29 543 aa6.59□□□□□ -1.36
TSPAN3-209ENST00000560715 TTLQ8NG68 377 aa6.59□□□□□ -1.36
TSPAN3-209ENST00000560715 GANCQ8TET4 914 aa6.59□□□□□ -1.36
TSPAN3-209ENST00000560715 REXO5Q96IC2 774 aaKnown RBP6.59□□□□□ -1.36
TSPAN3-209ENST00000560715 CEP19Q96LK0 163 aa6.59□□□□□ -1.36
TSPAN3-209ENST00000560715 IL12RB2Q99665 862 aa6.59□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms