RNA–Protein interactions for RNA: ENST00000559831.5

TPM1-221, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-221ENST00000559831 ASB1Q9Y576 335 aa10.13□□□□□ -0.79
TPM1-221ENST00000559831 ANGPTL3Q9Y5C1 460 aa10.13□□□□□ -0.79
TPM1-221ENST00000559831 TNPO3Q9Y5L0 923 aaKnown RBP10.13□□□□□ -0.79
TPM1-221ENST00000559831 CSNK1G3Q9Y6M4 447 aa10.13□□□□□ -0.79
TPM1-221ENST00000559831 SNRNP200O75643 2136 aaKnown RBP10.13□□□□□ -0.79
TPM1-221ENST00000559831 ARID1BQ8NFD5 2236 aaPredicted RBP10.13□□□□□ -0.79
TPM1-221ENST00000559831 ZNF839A8K0R7 811 aa10.12□□□□□ -0.79
TPM1-221ENST00000559831 TCP11X1B4DZS4 312 aa10.12□□□□□ -0.79
TPM1-221ENST00000559831 NOBOXO60393 691 aa10.12□□□□□ -0.79
TPM1-221ENST00000559831 LYPLA1O75608 230 aaPredicted RBP10.12□□□□□ -0.79
TPM1-221ENST00000559831 STK16O75716 305 aa10.12□□□□□ -0.79
TPM1-221ENST00000559831 HSPA4LO95757 839 aa10.12□□□□□ -0.79
TPM1-221ENST00000559831 RPS17P08708 135 aaKnown RBP10.12□□□□□ -0.79
TPM1-221ENST00000559831 ALPPL2P10696 532 aa10.12□□□□□ -0.79
TPM1-221ENST00000559831 TSPAN8P19075 237 aa10.12□□□□□ -0.79
TPM1-221ENST00000559831 PKLRP30613 574 aa10.12□□□□□ -0.79
TPM1-221ENST00000559831 CCR10P46092 362 aa10.12□□□□□ -0.79
TPM1-221ENST00000559831 PPM1FP49593 454 aaPredicted RBP10.12□□□□□ -0.79
TPM1-221ENST00000559831 TBPL1P62380 186 aa10.12□□□□□ -0.79
TPM1-221ENST00000559831 UBE2IP63279 158 aaKnown RBP10.12□□□□□ -0.79
TPM1-221ENST00000559831 HHEXQ03014 270 aa10.12□□□□□ -0.79
TPM1-221ENST00000559831 SPEM2Q0P670 501 aa10.12□□□□□ -0.79
TPM1-221ENST00000559831 BST1Q10588 318 aa10.12□□□□□ -0.79
TPM1-221ENST00000559831 STX3Q13277 289 aa10.12□□□□□ -0.79
TPM1-221ENST00000559831 FASTKQ14296 549 aaKnown RBP10.12□□□□□ -0.79
TPM1-221ENST00000559831 GPR18Q14330 331 aa10.12□□□□□ -0.79
TPM1-221ENST00000559831 SF3A2Q15428 464 aaKnown RBP10.12□□□□□ -0.79
TPM1-221ENST00000559831 PTCHD3Q3KNS1 767 aa10.12□□□□□ -0.79
TPM1-221ENST00000559831 C14orf28Q4W4Y0 310 aa10.12□□□□□ -0.79
TPM1-221ENST00000559831 C6orf132Q5T0Z8 1188 aa10.12□□□□□ -0.79
TPM1-221ENST00000559831 ATG16L1Q676U5 607 aa10.12□□□□□ -0.79
TPM1-221ENST00000559831 ARL14Q8N4G2 192 aa10.12□□□□□ -0.79
TPM1-221ENST00000559831 TEX9Q8N6V9 391 aa10.12□□□□□ -0.79
TPM1-221ENST00000559831 SAP25Q8TEE9 199 aa10.12□□□□□ -0.79
TPM1-221ENST00000559831 ZNF480Q8WV37 535 aa10.12□□□□□ -0.79
TPM1-221ENST00000559831 LCN9Q8WX39 176 aa10.12□□□□□ -0.79
TPM1-221ENST00000559831 PYCR2Q96C36 320 aa10.12□□□□□ -0.79
TPM1-221ENST00000559831 L3HYPDHQ96EM0 354 aa10.12□□□□□ -0.79
TPM1-221ENST00000559831 NSUN5Q96P11 429 aaKnown RBP10.12□□□□□ -0.79
TPM1-221ENST00000559831 RAB11FIP5Q9BXF6 653 aa10.12□□□□□ -0.79
TPM1-221ENST00000559831 PITPNM3Q9BZ71 974 aa10.12□□□□□ -0.79
TPM1-221ENST00000559831 SHCBP1LQ9BZQ2 653 aa10.12□□□□□ -0.79
TPM1-221ENST00000559831 CD244Q9BZW8 370 aa10.12□□□□□ -0.79
TPM1-221ENST00000559831 SLC40A1Q9NP59 571 aa10.12□□□□□ -0.79
TPM1-221ENST00000559831 NLGN3Q9NZ94 848 aa10.12□□□□□ -0.79
TPM1-221ENST00000559831 OPTCQ9UBM4 332 aa10.12□□□□□ -0.79
TPM1-221ENST00000559831 PCTPQ9UKL6 214 aa10.12□□□□□ -0.79
TPM1-221ENST00000559831 ICKQ9UPZ9 632 aa10.12□□□□□ -0.79
TPM1-221ENST00000559831 CACNA1HO95180 2353 aa10.12□□□□□ -0.79
TPM1-221ENST00000559831 TMEM114B3SHH9 223 aa10.11□□□□□ -0.79
TPM1-221ENST00000559831 K7EPI3 171 aa10.11□□□□□ -0.79
TPM1-221ENST00000559831 ITM2AO43736 263 aa10.11□□□□□ -0.79
TPM1-221ENST00000559831 NPHS1O60500 1241 aa10.11□□□□□ -0.79
TPM1-221ENST00000559831 VIMP08670 466 aaKnown RBP10.11□□□□□ -0.79
TPM1-221ENST00000559831 MYF5P13349 255 aa10.11□□□□□ -0.79
TPM1-221ENST00000559831 GRK2P25098 689 aa10.11□□□□□ -0.79
TPM1-221ENST00000559831 HSD17B2P37059 387 aa10.11□□□□□ -0.79
TPM1-221ENST00000559831 ARL1P40616 181 aaPredicted RBP10.11□□□□□ -0.79
TPM1-221ENST00000559831 SLC6A12P48065 614 aa10.11□□□□□ -0.79
TPM1-221ENST00000559831 SLC1A6P48664 564 aa10.11□□□□□ -0.79
TPM1-221ENST00000559831 RAB28P51157 221 aa10.11□□□□□ -0.79
TPM1-221ENST00000559831 CDH13P55290 713 aa10.11□□□□□ -0.79
TPM1-221ENST00000559831 ABCE1P61221 599 aaKnown RBP10.11□□□□□ -0.79
TPM1-221ENST00000559831 GTF2H2Q13888 395 aa10.11□□□□□ -0.79
TPM1-221ENST00000559831 RCN2Q14257 317 aa10.11□□□□□ -0.79
TPM1-221ENST00000559831 PCBP2Q15366 365 aaKnown RBP eCLIP10.11□□□□□ -0.79
TPM1-221ENST00000559831 CYP2A13Q16696 494 aa10.11□□□□□ -0.79
TPM1-221ENST00000559831 ZXDCQ2QGD7 858 aaPredicted RBP10.11□□□□□ -0.79
TPM1-221ENST00000559831 THEMIS2Q5TEJ8 643 aa10.11□□□□□ -0.79
TPM1-221ENST00000559831 CES4AQ5XG92 561 aa10.11□□□□□ -0.79
TPM1-221ENST00000559831 CAPN13Q6MZZ7 669 aaPredicted RBP10.11□□□□□ -0.79
TPM1-221ENST00000559831 GTF2H2CQ6P1K8 395 aa10.11□□□□□ -0.79
TPM1-221ENST00000559831 OGFOD3Q6PK18 319 aa10.11□□□□□ -0.79
TPM1-221ENST00000559831 SUSD1Q6UWL2 747 aa10.11□□□□□ -0.79
TPM1-221ENST00000559831 TMEM26Q6ZUK4 368 aa10.11□□□□□ -0.79
TPM1-221ENST00000559831 FRMD7Q6ZUT3 714 aa10.11□□□□□ -0.79
TPM1-221ENST00000559831 FAM47EQ6ZV65 393 aa10.11□□□□□ -0.79
TPM1-221ENST00000559831 LRRC70Q7Z2Q7 622 aa10.11□□□□□ -0.79
TPM1-221ENST00000559831 KANSL1Q7Z3B3 1105 aa10.11□□□□□ -0.79
TPM1-221ENST00000559831 GOLGA7Q7Z5G4 137 aa10.11□□□□□ -0.79
TPM1-221ENST00000559831 THOC6Q86W42 341 aaKnown RBP10.11□□□□□ -0.79
TPM1-221ENST00000559831 EID2Q8N6I1 236 aa10.11□□□□□ -0.79
TPM1-221ENST00000559831 ARL10Q8N8L6 244 aa10.11□□□□□ -0.79
TPM1-221ENST00000559831 AVL9Q8NBF6 648 aa10.11□□□□□ -0.79
TPM1-221ENST00000559831 OR4E2Q8NGC2 313 aa10.11□□□□□ -0.79
TPM1-221ENST00000559831 OR10G6Q8NH81 332 aa10.11□□□□□ -0.79
TPM1-221ENST00000559831 RAB3IL1Q8TBN0 382 aa10.11□□□□□ -0.79
TPM1-221ENST00000559831 TRPC4APQ8TEL6 797 aa10.11□□□□□ -0.79
TPM1-221ENST00000559831 ZNF483Q8TF39 744 aaPredicted RBP10.11□□□□□ -0.79
TPM1-221ENST00000559831 SH3KBP1Q96B97 665 aa10.11□□□□□ -0.79
TPM1-221ENST00000559831 CNDP1Q96KN2 507 aa10.11□□□□□ -0.79
TPM1-221ENST00000559831 DUSP23Q9BVJ7 150 aa10.11□□□□□ -0.79
TPM1-221ENST00000559831 TBC1D10AQ9BXI6 508 aa10.11□□□□□ -0.79
TPM1-221ENST00000559831 SRMSQ9H3Y6 488 aa10.11□□□□□ -0.79
TPM1-221ENST00000559831 GSTO2Q9H4Y5 243 aa10.11□□□□□ -0.79
TPM1-221ENST00000559831 ZNF395Q9H8N7 513 aaPredicted RBP10.11□□□□□ -0.79
TPM1-221ENST00000559831 SEMA4BQ9NPR2 832 aaPredicted RBP10.11□□□□□ -0.79
TPM1-221ENST00000559831 CCDC177Q9NQR7 707 aaPredicted RBP10.11□□□□□ -0.79
TPM1-221ENST00000559831 DNAJC11Q9NVH1 559 aa10.11□□□□□ -0.79
TPM1-221ENST00000559831 ADAM21Q9UKJ8 722 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms