RNA–Protein interactions for RNA: ENST00000559389.1

SNX1-206, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 753 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-206ENST00000559389 WASF3Q9UPY6 502 aa20.99■□□□□ 0.95
SNX1-206ENST00000559389 OARD1Q9Y530 152 aa20.99■□□□□ 0.95
SNX1-206ENST00000559389 ENTPD2Q9Y5L3 495 aa20.99■□□□□ 0.95
SNX1-206ENST00000559389 PIPSLA2A3N6 862 aa20.98■□□□□ 0.95
SNX1-206ENST00000559389 GSAPA4D1B5 854 aa20.98■□□□□ 0.95
SNX1-206ENST00000559389 C2orf74A8MZ97 194 aa20.98■□□□□ 0.95
SNX1-206ENST00000559389 IMPA1P29218 277 aa20.98■□□□□ 0.95
SNX1-206ENST00000559389 HSD17B2P37059 387 aa20.98■□□□□ 0.95
SNX1-206ENST00000559389 KPNA2P52292 529 aaKnown RBP20.98■□□□□ 0.95
SNX1-206ENST00000559389 AP1S2P56377 157 aa20.98■□□□□ 0.95
SNX1-206ENST00000559389 TRA2AQ13595 282 aaKnown RBP eCLIP20.98■□□□□ 0.953e-6■■□□□ 12.9
SNX1-206ENST00000559389 PRSS42Q7Z5A4 293 aa20.98■□□□□ 0.95
SNX1-206ENST00000559389 LMNTD1Q8N9Z9 388 aa20.98■□□□□ 0.95
SNX1-206ENST00000559389 FLVCR1-AS1Q8TAF5 88 aa20.98■□□□□ 0.95
SNX1-206ENST00000559389 ZNF480Q8WV37 535 aa20.98■□□□□ 0.95
SNX1-206ENST00000559389 KIAA1191Q96A73 305 aa20.98■□□□□ 0.95
SNX1-206ENST00000559389 PTERQ96BW5 349 aa20.98■□□□□ 0.95
SNX1-206ENST00000559389 ZDHHC12Q96GR4 267 aa20.98■□□□□ 0.95
SNX1-206ENST00000559389 TMEM109Q9BVC6 243 aa20.98■□□□□ 0.95
SNX1-206ENST00000559389 TRIM54Q9BYV2 358 aa20.98■□□□□ 0.95
SNX1-206ENST00000559389 NMRAL1Q9HBL8 299 aa20.98■□□□□ 0.95
SNX1-206ENST00000559389 SPHK1Q9NYA1 384 aa20.98■□□□□ 0.95
SNX1-206ENST00000559389 STOX2Q9P2F5 926 aaPredicted RBP20.98■□□□□ 0.95
SNX1-206ENST00000559389 LNPEPQ9UIQ6 1025 aa20.98■□□□□ 0.95
SNX1-206ENST00000559389 ADAMTS20P59510 1910 aa20.98■□□□□ 0.95
SNX1-206ENST00000559389 FAM149AA5PLN7 773 aa20.97■□□□□ 0.95
SNX1-206ENST00000559389 TLCD2A6NGC4 264 aa20.97■□□□□ 0.95
SNX1-206ENST00000559389 TOP3BO95985 862 aaKnown RBP20.97■□□□□ 0.95
SNX1-206ENST00000559389 ADRB1P08588 477 aa20.97■□□□□ 0.95
SNX1-206ENST00000559389 ANKRD34CP0C6C1 535 aa20.97■□□□□ 0.95
SNX1-206ENST00000559389 TFEBP19484 476 aa20.97■□□□□ 0.95
SNX1-206ENST00000559389 MPSTP25325 297 aa20.97■□□□□ 0.95
SNX1-206ENST00000559389 PNLIPRP1P54315 467 aa20.97■□□□□ 0.95
SNX1-206ENST00000559389 CDKL1Q00532 357 aa20.97■□□□□ 0.95
SNX1-206ENST00000559389 KIR2DS3Q14952 304 aa20.97■□□□□ 0.95
SNX1-206ENST00000559389 OR4D1Q15615 310 aa20.97■□□□□ 0.95
SNX1-206ENST00000559389 PHF19Q5T6S3 580 aa20.97■□□□□ 0.95
SNX1-206ENST00000559389 MBOAT1Q6ZNC8 495 aa20.97■□□□□ 0.95
SNX1-206ENST00000559389 FAM92BQ6ZTR7 304 aa20.97■□□□□ 0.95
SNX1-206ENST00000559389 CLEC14AQ86T13 490 aa20.97■□□□□ 0.95
SNX1-206ENST00000559389 TAX1BP1Q86VP1 789 aa20.97■□□□□ 0.95
SNX1-206ENST00000559389 NXNL1Q96CM4 212 aa20.97■□□□□ 0.95
SNX1-206ENST00000559389 GRAMD1AQ96CP6 724 aa20.97■□□□□ 0.95
SNX1-206ENST00000559389 CABS1Q96KC9 395 aa20.97■□□□□ 0.95
SNX1-206ENST00000559389 CCDC138Q96M89 665 aa20.97■□□□□ 0.95
SNX1-206ENST00000559389 ROPN1BQ9BZX4 212 aaPredicted RBP20.97■□□□□ 0.95
SNX1-206ENST00000559389 ROPN1Q9HAT0 212 aaPredicted RBP20.97■□□□□ 0.95
SNX1-206ENST00000559389 SEMA5BQ9P283 1151 aa20.97■□□□□ 0.95
SNX1-206ENST00000559389 KLHL3Q9UH77 587 aa20.97■□□□□ 0.95
SNX1-206ENST00000559389 LGALS13Q9UHV8 139 aa20.97■□□□□ 0.95
SNX1-206ENST00000559389 PABPN1LA6NDY0 278 aaKnown RBP20.96■□□□□ 0.95
SNX1-206ENST00000559389 ZNF839A8K0R7 811 aa20.96■□□□□ 0.95
SNX1-206ENST00000559389 TOX3O15405 576 aaPredicted RBP20.96■□□□□ 0.95
SNX1-206ENST00000559389 KLHL2O95198 593 aa20.96■□□□□ 0.95
SNX1-206ENST00000559389 HIST1H2AGP0C0S8 130 aaPredicted RBP20.96■□□□□ 0.95
SNX1-206ENST00000559389 JUPP14923 745 aa20.96■□□□□ 0.95
SNX1-206ENST00000559389 UGT2B7P16662 529 aa20.96■□□□□ 0.95
SNX1-206ENST00000559389 HIST1H2ADP20671 130 aa20.96■□□□□ 0.95
SNX1-206ENST00000559389 ZNF844Q08AG5 666 aa20.96■□□□□ 0.95
SNX1-206ENST00000559389 TARDBPQ13148 414 aaKnown RBP eCLIP20.96■□□□□ 0.95
SNX1-206ENST00000559389 FASTKQ14296 549 aaKnown RBP20.96■□□□□ 0.95
SNX1-206ENST00000559389 FAM83EQ2M2I3 478 aa20.96■□□□□ 0.95
SNX1-206ENST00000559389 FBXO38Q6PIJ6 1188 aa20.96■□□□□ 0.95
SNX1-206ENST00000559389 SPESP1Q6UW49 350 aa20.96■□□□□ 0.95
SNX1-206ENST00000559389 FRA10AC1Q70Z53 315 aa20.96■□□□□ 0.95
SNX1-206ENST00000559389 CYP4X1Q8N118 509 aa20.96■□□□□ 0.95
SNX1-206ENST00000559389 CARFQ8N187 725 aa20.96■□□□□ 0.95
SNX1-206ENST00000559389 ACMSDQ8TDX5 336 aa20.96■□□□□ 0.95
SNX1-206ENST00000559389 LIN37Q96GY3 246 aaPredicted RBP20.96■□□□□ 0.95
SNX1-206ENST00000559389 HIST1H2AHQ96KK5 128 aa20.96■□□□□ 0.95
SNX1-206ENST00000559389 GPR78Q96P69 363 aa20.96■□□□□ 0.95
SNX1-206ENST00000559389 OR2A14Q96R47 310 aa20.96■□□□□ 0.95
SNX1-206ENST00000559389 HIST1H2AJQ99878 128 aa20.96■□□□□ 0.95
SNX1-206ENST00000559389 H2AFJQ9BTM1 129 aa20.96■□□□□ 0.95
SNX1-206ENST00000559389 PITPNM3Q9BZ71 974 aa20.96■□□□□ 0.95
SNX1-206ENST00000559389 PCMTD2Q9NV79 361 aa20.96■□□□□ 0.95
SNX1-206ENST00000559389 ARL15Q9NXU5 204 aa20.96■□□□□ 0.95
SNX1-206ENST00000559389 UTP6Q9NYH9 597 aaKnown RBP20.96■□□□□ 0.95
SNX1-206ENST00000559389 UNC13CQ8NB66 2214 aa20.95■□□□□ 0.94
SNX1-206ENST00000559389 A0A1W2PPV9 198 aa20.95■□□□□ 0.94
SNX1-206ENST00000559389 CCDC189A1A4V9 331 aa20.95■□□□□ 0.94
SNX1-206ENST00000559389 TMX2-CTNND1H3BSU7 103 aa20.95■□□□□ 0.94
SNX1-206ENST00000559389 KIF1CO43896 1103 aaKnown RBP20.95■□□□□ 0.94
SNX1-206ENST00000559389 PRICKLE3O43900 615 aaPredicted RBP20.95■□□□□ 0.94
SNX1-206ENST00000559389 COL6A2P12110 1019 aa20.95■□□□□ 0.94
SNX1-206ENST00000559389 C16orf72Q14CZ0 275 aa20.95■□□□□ 0.94
SNX1-206ENST00000559389 SLC5A12Q1EHB4 618 aa20.95■□□□□ 0.94
SNX1-206ENST00000559389 SNAP47Q5SQN1 464 aa20.95■□□□□ 0.94
SNX1-206ENST00000559389 ARHGAP22Q7Z5H3 698 aa20.95■□□□□ 0.94
SNX1-206ENST00000559389 ISCA2Q86U28 154 aa20.95■□□□□ 0.94
SNX1-206ENST00000559389 MARCH9Q86YJ5 346 aa20.95■□□□□ 0.94
SNX1-206ENST00000559389 LRRC56Q8IYG6 542 aaPredicted RBP20.95■□□□□ 0.94
SNX1-206ENST00000559389 SYTL1Q8IYJ3 562 aa20.95■□□□□ 0.94
SNX1-206ENST00000559389 IQCKQ8N0W5 287 aa20.95■□□□□ 0.94
SNX1-206ENST00000559389 PLD6Q8N2A8 252 aaKnown RBP20.95■□□□□ 0.94
SNX1-206ENST00000559389 C2orf73Q8N5S3 287 aaPredicted RBP20.95■□□□□ 0.94
SNX1-206ENST00000559389 PPFIBP2Q8ND30 876 aa20.95■□□□□ 0.94
SNX1-206ENST00000559389 SMPDL3AQ92484 453 aa20.95■□□□□ 0.94
SNX1-206ENST00000559389 SLC22A18Q96BI1 424 aa20.95■□□□□ 0.94
SNX1-206ENST00000559389 FBXL8Q96CD0 374 aa20.95■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms