RNA–Protein interactions for RNA: ENST00000559309.5

SNRPA1-207, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 5

Gene SNRPA1, Length 924 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-207ENST00000559309 TAPBPO15533 448 aa14.35□□□□□ -0.11
SNRPA1-207ENST00000559309 PRPF4O43172 522 aaKnown RBP eCLIP14.35□□□□□ -0.11
SNRPA1-207ENST00000559309 PLIN3O60664 434 aa14.35□□□□□ -0.11
SNRPA1-207ENST00000559309 C9P02748 559 aa14.35□□□□□ -0.11
SNRPA1-207ENST00000559309 PROCP04070 461 aa14.35□□□□□ -0.11
SNRPA1-207ENST00000559309 CD1CP29017 333 aa14.35□□□□□ -0.11
SNRPA1-207ENST00000559309 PEBP1P30086 187 aaKnown RBP14.35□□□□□ -0.11
SNRPA1-207ENST00000559309 HSD17B2P37059 387 aa14.35□□□□□ -0.11
SNRPA1-207ENST00000559309 CCT5P48643 541 aa14.35□□□□□ -0.11
SNRPA1-207ENST00000559309 NFKB2Q00653 900 aa14.35□□□□□ -0.11
SNRPA1-207ENST00000559309 PRKG2Q13237 762 aa14.35□□□□□ -0.11
SNRPA1-207ENST00000559309 MPP2Q14168 576 aa14.35□□□□□ -0.11
SNRPA1-207ENST00000559309 TRIM48Q8IWZ4 208 aa14.35□□□□□ -0.11
SNRPA1-207ENST00000559309 OR56A3Q8NH54 315 aa14.35□□□□□ -0.11
SNRPA1-207ENST00000559309 UBTD2Q8WUN7 234 aa14.35□□□□□ -0.11
SNRPA1-207ENST00000559309 ATP6V1G3Q96LB4 118 aa14.35□□□□□ -0.11
SNRPA1-207ENST00000559309 SGPP1Q9BX95 441 aa14.35□□□□□ -0.11
SNRPA1-207ENST00000559309 RAB11FIP5Q9BXF6 653 aa14.35□□□□□ -0.11
SNRPA1-207ENST00000559309 C1QTNF3Q9BXJ4 246 aa14.35□□□□□ -0.11
SNRPA1-207ENST00000559309 MRPL46Q9H2W6 279 aaKnown RBP14.35□□□□□ -0.11
SNRPA1-207ENST00000559309 STN1Q9H668 368 aaKnown RBP14.35□□□□□ -0.11
SNRPA1-207ENST00000559309 STOX2Q9P2F5 926 aaPredicted RBP14.35□□□□□ -0.11
SNRPA1-207ENST00000559309 XPR1Q9UBH6 696 aa14.35□□□□□ -0.11
SNRPA1-207ENST00000559309 TSR3Q9UJK0 312 aaKnown RBP14.35□□□□□ -0.11
SNRPA1-207ENST00000559309 KLK4Q9Y5K2 254 aa14.35□□□□□ -0.11
SNRPA1-207ENST00000559309 CHD6Q8TD26 2715 aa14.35□□□□□ -0.11
SNRPA1-207ENST00000559309 USP24Q9UPU5 2620 aa14.34□□□□□ -0.11
SNRPA1-207ENST00000559309 ANKRD12Q6UB98 2062 aa14.34□□□□□ -0.11
SNRPA1-207ENST00000559309 OR5K3A6NET4 321 aa14.34□□□□□ -0.11
SNRPA1-207ENST00000559309 TK2O00142 265 aa14.34□□□□□ -0.11
SNRPA1-207ENST00000559309 BTN3A3O00478 584 aa14.34□□□□□ -0.11
SNRPA1-207ENST00000559309 COPEO14579 308 aa14.34□□□□□ -0.11
SNRPA1-207ENST00000559309 CASC3O15234 703 aaKnown RBP14.34□□□□□ -0.11
SNRPA1-207ENST00000559309 ADRB1P08588 477 aa14.34□□□□□ -0.11
SNRPA1-207ENST00000559309 DHRS4L1P0CG22 281 aa14.34□□□□□ -0.11
SNRPA1-207ENST00000559309 SHMT2P34897 504 aa14.34□□□□□ -0.11
SNRPA1-207ENST00000559309 CAPZBP47756 277 aa14.34□□□□□ -0.11
SNRPA1-207ENST00000559309 GLRBP48167 497 aa14.34□□□□□ -0.11
SNRPA1-207ENST00000559309 HNMTP50135 292 aa14.34□□□□□ -0.11
SNRPA1-207ENST00000559309 PCDH1Q08174 1060 aa14.34□□□□□ -0.11
SNRPA1-207ENST00000559309 E2F2Q14209 437 aa14.34□□□□□ -0.11
SNRPA1-207ENST00000559309 CCDC153Q494R4 210 aa14.34□□□□□ -0.11
SNRPA1-207ENST00000559309 N4BP2L1Q5TBK1 243 aaPredicted RBP14.34□□□□□ -0.11
SNRPA1-207ENST00000559309 ANKS6Q68DC2 871 aa14.34□□□□□ -0.11
SNRPA1-207ENST00000559309 KLC3Q6P597 504 aa14.34□□□□□ -0.11
SNRPA1-207ENST00000559309 MBOAT1Q6ZNC8 495 aa14.34□□□□□ -0.11
SNRPA1-207ENST00000559309 EFL1Q7Z2Z2 1120 aaKnown RBP14.34□□□□□ -0.11
SNRPA1-207ENST00000559309 AMIGO1Q86WK6 493 aa14.34□□□□□ -0.11
SNRPA1-207ENST00000559309 GPSM1Q86YR5 675 aa14.34□□□□□ -0.11
SNRPA1-207ENST00000559309 IFI44Q8TCB0 444 aa14.34□□□□□ -0.11
SNRPA1-207ENST00000559309 SKA2Q8WVK7 121 aaPredicted RBP14.34□□□□□ -0.11
SNRPA1-207ENST00000559309 RSC1A1Q92681 617 aa14.34□□□□□ -0.11
SNRPA1-207ENST00000559309 CCDC3Q9BQI4 270 aa14.34□□□□□ -0.11
SNRPA1-207ENST00000559309 TMEM79Q9BSE2 394 aa14.34□□□□□ -0.11
SNRPA1-207ENST00000559309 STMN4Q9H169 189 aaPredicted RBP14.34□□□□□ -0.11
SNRPA1-207ENST00000559309 NUDT4Q9NZJ9 180 aa14.34□□□□□ -0.11
SNRPA1-207ENST00000559309 MN1Q10571 1320 aaPredicted RBP14.34□□□□□ -0.11
SNRPA1-207ENST00000559309 RHPN2P1A8MT19 583 aa14.33□□□□□ -0.12
SNRPA1-207ENST00000559309 OPA1O60313 960 aa14.33□□□□□ -0.12
SNRPA1-207ENST00000559309 KDM1AO60341 852 aa14.33□□□□□ -0.12
SNRPA1-207ENST00000559309 UBXN7O94888 489 aa14.33□□□□□ -0.12
SNRPA1-207ENST00000559309 CEACAM1P13688 526 aa14.33□□□□□ -0.12
SNRPA1-207ENST00000559309 KPNA2P52292 529 aaKnown RBP14.33□□□□□ -0.12
SNRPA1-207ENST00000559309 PNLIPRP1P54315 467 aa14.33□□□□□ -0.12
SNRPA1-207ENST00000559309 OR1D5P58170 312 aa14.33□□□□□ -0.12
SNRPA1-207ENST00000559309 FASTKQ14296 549 aaKnown RBP14.33□□□□□ -0.12
SNRPA1-207ENST00000559309 TRIP6Q15654 476 aaKnown RBP14.33□□□□□ -0.12
SNRPA1-207ENST00000559309 SULT1C3Q6IMI6 304 aa14.33□□□□□ -0.12
SNRPA1-207ENST00000559309 METTL2BQ6P1Q9 378 aaKnown RBP14.33□□□□□ -0.12
SNRPA1-207ENST00000559309 C16orf46Q6P387 395 aa14.33□□□□□ -0.12
SNRPA1-207ENST00000559309 TTC23LQ6PF05 361 aa14.33□□□□□ -0.12
SNRPA1-207ENST00000559309 WDR74Q6RFH5 385 aaPredicted RBP14.33□□□□□ -0.12
SNRPA1-207ENST00000559309 AGTRAPQ6RW13 159 aa14.33□□□□□ -0.12
SNRPA1-207ENST00000559309 ZNF761Q86XN6 746 aaPredicted RBP14.33□□□□□ -0.12
SNRPA1-207ENST00000559309 OR2A1Q8NGT9 310 aa14.33□□□□□ -0.12
SNRPA1-207ENST00000559309 OR6Y1Q8NGX8 325 aa14.33□□□□□ -0.12
SNRPA1-207ENST00000559309 RDH11Q8TC12 318 aa14.33□□□□□ -0.12
SNRPA1-207ENST00000559309 LCN9Q8WX39 176 aa14.33□□□□□ -0.12
SNRPA1-207ENST00000559309 IL17FQ96PD4 163 aa14.33□□□□□ -0.12
SNRPA1-207ENST00000559309 SMC6Q96SB8 1091 aa14.33□□□□□ -0.12
SNRPA1-207ENST00000559309 RUFY1Q96T51 708 aa14.33□□□□□ -0.12
SNRPA1-207ENST00000559309 SLC38A3Q99624 504 aa14.33□□□□□ -0.12
SNRPA1-207ENST00000559309 PITPNM3Q9BZ71 974 aa14.33□□□□□ -0.12
SNRPA1-207ENST00000559309 EVA1BQ9NVM1 165 aa14.33□□□□□ -0.12
SNRPA1-207ENST00000559309 RNF112Q9ULX5 631 aa14.33□□□□□ -0.12
SNRPA1-207ENST00000559309 TMCO1Q9UM00 188 aa14.33□□□□□ -0.12
SNRPA1-207ENST00000559309 PLAGL1Q9UM63 463 aa14.33□□□□□ -0.12
SNRPA1-207ENST00000559309 ENTPD2Q9Y5L3 495 aa14.33□□□□□ -0.12
SNRPA1-207ENST00000559309 ADAMTS20P59510 1910 aa14.33□□□□□ -0.12
SNRPA1-207ENST00000559309 CEP295Q9C0D2 2601 aa14.32□□□□□ -0.12
SNRPA1-207ENST00000559309 SYCE1LA8MT33 242 aa14.32□□□□□ -0.12
SNRPA1-207ENST00000559309 STX16-NPEPL1H3BU86 382 aa14.32□□□□□ -0.12
SNRPA1-207ENST00000559309 UBXN8O00124 270 aa14.32□□□□□ -0.12
SNRPA1-207ENST00000559309 STX16O14662 325 aa14.32□□□□□ -0.12
SNRPA1-207ENST00000559309 PROS1P07225 676 aa14.32□□□□□ -0.12
SNRPA1-207ENST00000559309 ANXA5P08758 320 aa14.32□□□□□ -0.12
SNRPA1-207ENST00000559309 CHRM5P08912 532 aaPredicted RBP14.32□□□□□ -0.12
SNRPA1-207ENST00000559309 HIST1H2AGP0C0S8 130 aaPredicted RBP14.32□□□□□ -0.12
SNRPA1-207ENST00000559309 HIST1H2ADP20671 130 aa14.32□□□□□ -0.12
SNRPA1-207ENST00000559309 MAP4P27816 1152 aaKnown RBP14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms