RNA–Protein interactions for RNA: ENST00000559100.1

GABPB1-209, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 3

Gene GABPB1, Length 290 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-209ENST00000559100 LUMP51884 338 aaPredicted RBP2.19□□□□□ -2.06
GABPB1-209ENST00000559100 ZNF131P52739 623 aa2.19□□□□□ -2.06
GABPB1-209ENST00000559100 SLC12A3P55017 1021 aa2.19□□□□□ -2.06
GABPB1-209ENST00000559100 MFAP3P55082 362 aa2.19□□□□□ -2.06
GABPB1-209ENST00000559100 SEC61A1P61619 476 aaKnown RBP2.19□□□□□ -2.06
GABPB1-209ENST00000559100 CX3CL1P78423 397 aa2.19□□□□□ -2.06
GABPB1-209ENST00000559100 AKAP17AQ02040 695 aaKnown RBP2.19□□□□□ -2.06
GABPB1-209ENST00000559100 ILF2Q12905 390 aaKnown RBP2.19□□□□□ -2.06
GABPB1-209ENST00000559100 MYBPHQ13203 477 aa2.19□□□□□ -2.06
GABPB1-209ENST00000559100 ZNF234Q14588 700 aa2.19□□□□□ -2.06
GABPB1-209ENST00000559100 PDK1Q15118 436 aa2.19□□□□□ -2.06
GABPB1-209ENST00000559100 NONOQ15233 471 aaKnown RBP eCLIP2.19□□□□□ -2.06
GABPB1-209ENST00000559100 RPS6KA1Q15418 735 aa2.19□□□□□ -2.06
GABPB1-209ENST00000559100 OASLQ15646 514 aaKnown RBP2.19□□□□□ -2.06
GABPB1-209ENST00000559100 FAM174BQ3ZCQ3 159 aa2.19□□□□□ -2.06
GABPB1-209ENST00000559100 LACTB2Q53H82 288 aaPredicted RBP2.19□□□□□ -2.06
GABPB1-209ENST00000559100 TDRD12Q587J7 1177 aaKnown RBP2.19□□□□□ -2.06
GABPB1-209ENST00000559100 HSP90AA5PQ58FG0 334 aa2.19□□□□□ -2.06
GABPB1-209ENST00000559100 SYT14P1Q58G82 188 aa2.19□□□□□ -2.06
GABPB1-209ENST00000559100 ZNF789Q5FWF6 425 aa2.19□□□□□ -2.06
GABPB1-209ENST00000559100 LRRC38Q5VT99 294 aa2.19□□□□□ -2.06
GABPB1-209ENST00000559100 FAM46CQ5VWP2 391 aa2.19□□□□□ -2.06
GABPB1-209ENST00000559100 FAM122CQ6P4D5 195 aa2.19□□□□□ -2.06
GABPB1-209ENST00000559100 NOTUMQ6P988 496 aa2.19□□□□□ -2.06
GABPB1-209ENST00000559100 SLC27A1Q6PCB7 646 aa2.19□□□□□ -2.06
GABPB1-209ENST00000559100 PODNL1Q6PEZ8 512 aa2.19□□□□□ -2.06
GABPB1-209ENST00000559100 RHBDF2Q6PJF5 856 aa2.19□□□□□ -2.06
GABPB1-209ENST00000559100 PACS1Q6VY07 963 aa2.19□□□□□ -2.06
GABPB1-209ENST00000559100 ZNF704Q6ZNC4 412 aaPredicted RBP2.19□□□□□ -2.06
GABPB1-209ENST00000559100 ATG9AQ7Z3C6 839 aa2.19□□□□□ -2.06
GABPB1-209ENST00000559100 DGLUCYQ7Z3D6 616 aa2.19□□□□□ -2.06
GABPB1-209ENST00000559100 MIER3Q7Z3K6 550 aa2.19□□□□□ -2.06
GABPB1-209ENST00000559100 SLC9B2Q86UD5 537 aa2.19□□□□□ -2.06
GABPB1-209ENST00000559100 NLRP14Q86W24 1093 aa2.19□□□□□ -2.06
GABPB1-209ENST00000559100 LONP2Q86WA8 852 aa2.19□□□□□ -2.06
GABPB1-209ENST00000559100 TMPRSS12Q86WS5 348 aa2.19□□□□□ -2.06
GABPB1-209ENST00000559100 PTOV1Q86YD1 416 aa2.19□□□□□ -2.06
GABPB1-209ENST00000559100 CNTN4Q8IWV2 1026 aa2.19□□□□□ -2.06
GABPB1-209ENST00000559100 AQP12AQ8IXF9 295 aa2.19□□□□□ -2.06
GABPB1-209ENST00000559100 ODF3L1Q8IXM7 274 aa2.19□□□□□ -2.06
GABPB1-209ENST00000559100 LGI2Q8N0V4 545 aa2.19□□□□□ -2.06
GABPB1-209ENST00000559100 Q8N1X5 172 aa2.19□□□□□ -2.06
GABPB1-209ENST00000559100 RTL3Q8N8U3 475 aaKnown RBP2.19□□□□□ -2.06
GABPB1-209ENST00000559100 KCNH5Q8NCM2 988 aa2.19□□□□□ -2.06
GABPB1-209ENST00000559100 SLC26A7Q8TE54 656 aa2.19□□□□□ -2.06
GABPB1-209ENST00000559100 RNF128Q8TEB7 428 aa2.19□□□□□ -2.06
GABPB1-209ENST00000559100 TANKQ92844 425 aa2.19□□□□□ -2.06
GABPB1-209ENST00000559100 CENPTQ96BT3 561 aa2.19□□□□□ -2.06
GABPB1-209ENST00000559100 PYCR2Q96C36 320 aa2.19□□□□□ -2.06
GABPB1-209ENST00000559100 CDCA5Q96FF9 252 aa2.19□□□□□ -2.06
GABPB1-209ENST00000559100 PGM2Q96G03 612 aa2.19□□□□□ -2.06
GABPB1-209ENST00000559100 CFAP36Q96G28 342 aa2.19□□□□□ -2.06
GABPB1-209ENST00000559100 C5orf30Q96GV9 206 aa2.19□□□□□ -2.06
GABPB1-209ENST00000559100 CDKN2AIPNLQ96HQ2 116 aa2.19□□□□□ -2.06
GABPB1-209ENST00000559100 URM1Q9BTM9 101 aaKnown RBP2.19□□□□□ -2.06
GABPB1-209ENST00000559100 CDK19Q9BWU1 502 aa2.19□□□□□ -2.06
GABPB1-209ENST00000559100 C1QTNF7Q9BXJ2 289 aa2.19□□□□□ -2.06
GABPB1-209ENST00000559100 SLC2A11Q9BYW1 496 aa2.19□□□□□ -2.06
GABPB1-209ENST00000559100 SCAND2PQ9GZW5 306 aaPredicted RBP2.19□□□□□ -2.06
GABPB1-209ENST00000559100 ZNF350Q9GZX5 532 aa2.19□□□□□ -2.06
GABPB1-209ENST00000559100 S1PR5Q9H228 398 aa2.19□□□□□ -2.06
GABPB1-209ENST00000559100 LMAN1LQ9HAT1 526 aa2.19□□□□□ -2.06
GABPB1-209ENST00000559100 Q9N2K0 584 aa2.19□□□□□ -2.06
GABPB1-209ENST00000559100 OLFML3Q9NRN5 406 aa2.19□□□□□ -2.06
GABPB1-209ENST00000559100 ZBTB40Q9NUA8 1239 aa2.19□□□□□ -2.06
GABPB1-209ENST00000559100 SLC38A7Q9NVC3 462 aa2.19□□□□□ -2.06
GABPB1-209ENST00000559100 OCIAD1Q9NX40 245 aa2.19□□□□□ -2.06
GABPB1-209ENST00000559100 ZNF224Q9NZL3 707 aa2.19□□□□□ -2.06
GABPB1-209ENST00000559100 B3GAT1Q9P2W7 334 aa2.19□□□□□ -2.06
GABPB1-209ENST00000559100 MALT1Q9UDY8 824 aa2.19□□□□□ -2.06
GABPB1-209ENST00000559100 VDAC3Q9Y277 283 aa2.19□□□□□ -2.06
GABPB1-209ENST00000559100 TDRKHQ9Y2W6 561 aaKnown RBP2.19□□□□□ -2.06
GABPB1-209ENST00000559100 OR2W1Q9Y3N9 320 aa2.19□□□□□ -2.06
GABPB1-209ENST00000559100 NME7Q9Y5B8 376 aa2.19□□□□□ -2.06
GABPB1-209ENST00000559100 PDS5AQ29RF7 1337 aaKnown RBP2.18□□□□□ -2.06
GABPB1-209ENST00000559100 A0A0G2JPF8 293 aa2.18□□□□□ -2.06
GABPB1-209ENST00000559100 A0A0U1RQJ8 604 aa2.18□□□□□ -2.06
GABPB1-209ENST00000559100 FAM90A10PA6NDY2 464 aa2.18□□□□□ -2.06
GABPB1-209ENST00000559100 HNRNPCL3B7ZW38 293 aa2.18□□□□□ -2.06
GABPB1-209ENST00000559100 GAPDHSO14556 408 aaPredicted RBP2.18□□□□□ -2.06
GABPB1-209ENST00000559100 MID1O15344 667 aa2.18□□□□□ -2.06
GABPB1-209ENST00000559100 TXNL1O43396 289 aa2.18□□□□□ -2.06
GABPB1-209ENST00000559100 SLC28A2O43868 658 aa2.18□□□□□ -2.06
GABPB1-209ENST00000559100 OR10H2O60403 315 aa2.18□□□□□ -2.06
GABPB1-209ENST00000559100 SNX3O60493 162 aa2.18□□□□□ -2.06
GABPB1-209ENST00000559100 PRAF2O60831 178 aa2.18□□□□□ -2.06
GABPB1-209ENST00000559100 ATP9AO75110 1047 aa2.18□□□□□ -2.06
GABPB1-209ENST00000559100 ATP6V1G1O75348 118 aa2.18□□□□□ -2.06
GABPB1-209ENST00000559100 NME6O75414 186 aaPredicted RBP2.18□□□□□ -2.06
GABPB1-209ENST00000559100 RBMXL2O75526 392 aaKnown RBP2.18□□□□□ -2.06
GABPB1-209ENST00000559100 DDHD2O94830 711 aa2.18□□□□□ -2.06
GABPB1-209ENST00000559100 GLCEO94923 617 aa2.18□□□□□ -2.06
GABPB1-209ENST00000559100 GAS8O95995 478 aa2.18□□□□□ -2.06
GABPB1-209ENST00000559100 TFAP2AP05549 437 aa2.18□□□□□ -2.06
GABPB1-209ENST00000559100 ANKRD34CP0C6C1 535 aa2.18□□□□□ -2.06
GABPB1-209ENST00000559100 HNRNPCL4P0DMR1 293 aa2.18□□□□□ -2.06
GABPB1-209ENST00000559100 GHRP10912 638 aa2.18□□□□□ -2.06
GABPB1-209ENST00000559100 ACP2P11117 423 aa2.18□□□□□ -2.06
GABPB1-209ENST00000559100 HOXB2P14652 356 aa2.18□□□□□ -2.06
GABPB1-209ENST00000559100 CSF2RAP15509 400 aa2.18□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 84.3 ms