RNA–Protein interactions for RNA: ENST00000558072.5

TPM1-209, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-209ENST00000558072 SHBQ15464 509 aa12.05□□□□□ -0.48
TPM1-209ENST00000558072 CHI3L2Q15782 390 aa12.05□□□□□ -0.48
TPM1-209ENST00000558072 CYP2A13Q16696 494 aa12.05□□□□□ -0.48
TPM1-209ENST00000558072 PHKG1Q16816 387 aa12.05□□□□□ -0.48
TPM1-209ENST00000558072 PLA2G2CQ5R387 149 aa12.05□□□□□ -0.48
TPM1-209ENST00000558072 ZNF678Q5SXM1 525 aa12.05□□□□□ -0.48
TPM1-209ENST00000558072 C6orf132Q5T0Z8 1188 aa12.05□□□□□ -0.48
TPM1-209ENST00000558072 ZCCHC8Q6NZY4 707 aaKnown RBP12.05□□□□□ -0.48
TPM1-209ENST00000558072 AGTRAPQ6RW13 159 aa12.05□□□□□ -0.48
TPM1-209ENST00000558072 XKR5Q6UX68 686 aa12.05□□□□□ -0.48
TPM1-209ENST00000558072 EFL1Q7Z2Z2 1120 aaKnown RBP12.05□□□□□ -0.48
TPM1-209ENST00000558072 CCNYL1Q8N7R7 359 aa12.05□□□□□ -0.48
TPM1-209ENST00000558072 ARL10Q8N8L6 244 aa12.05□□□□□ -0.48
TPM1-209ENST00000558072 OR5AR1Q8NGP9 310 aa12.05□□□□□ -0.48
TPM1-209ENST00000558072 OR2L8Q8NGY9 312 aa12.05□□□□□ -0.48
TPM1-209ENST00000558072 LCN9Q8WX39 176 aa12.05□□□□□ -0.48
TPM1-209ENST00000558072 ZNF75CPQ92670 426 aaPredicted RBP12.05□□□□□ -0.48
TPM1-209ENST00000558072 GRAMD1AQ96CP6 724 aa12.05□□□□□ -0.48
TPM1-209ENST00000558072 PKP4Q99569 1192 aa12.05□□□□□ -0.48
TPM1-209ENST00000558072 DRC3Q9H069 523 aa12.05□□□□□ -0.48
TPM1-209ENST00000558072 CCDC177Q9NQR7 707 aaPredicted RBP12.05□□□□□ -0.48
TPM1-209ENST00000558072 WDR37Q9Y2I8 494 aa12.05□□□□□ -0.48
TPM1-209ENST00000558072 KCNE2Q9Y6J6 123 aa12.05□□□□□ -0.48
TPM1-209ENST00000558072 TDRD6O60522 2096 aaKnown RBP12.04□□□□□ -0.48
TPM1-209ENST00000558072 WDR91A4D1P6 747 aa12.04□□□□□ -0.48
TPM1-209ENST00000558072 HGSO14964 777 aaPredicted RBP12.04□□□□□ -0.48
TPM1-209ENST00000558072 CLGNO14967 610 aa12.04□□□□□ -0.48
TPM1-209ENST00000558072 UGDHO60701 494 aa12.04□□□□□ -0.48
TPM1-209ENST00000558072 SLC16A8O95907 504 aa12.04□□□□□ -0.48
TPM1-209ENST00000558072 OTCP00480 354 aa12.04□□□□□ -0.48
TPM1-209ENST00000558072 LMNAP02545 664 aaKnown RBP12.04□□□□□ -0.48
TPM1-209ENST00000558072 ERGP11308 486 aa12.04□□□□□ -0.48
TPM1-209ENST00000558072 EEF1DP29692 281 aaKnown RBP12.04□□□□□ -0.48
TPM1-209ENST00000558072 NBL1P41271 181 aa12.04□□□□□ -0.48
TPM1-209ENST00000558072 SLC19A1P41440 591 aa12.04□□□□□ -0.48
TPM1-209ENST00000558072 GPR3P46089 330 aa12.04□□□□□ -0.48
TPM1-209ENST00000558072 BDKRB1P46663 353 aa12.04□□□□□ -0.48
TPM1-209ENST00000558072 EPHA4P54764 986 aa12.04□□□□□ -0.48
TPM1-209ENST00000558072 PKNOX1P55347 436 aa12.04□□□□□ -0.48
TPM1-209ENST00000558072 ABCE1P61221 599 aaKnown RBP12.04□□□□□ -0.48
TPM1-209ENST00000558072 UBE2IP63279 158 aaKnown RBP12.04□□□□□ -0.48
TPM1-209ENST00000558072 ABATP80404 500 aa12.04□□□□□ -0.48
TPM1-209ENST00000558072 BNIP3Q12983 259 aa12.04□□□□□ -0.48
TPM1-209ENST00000558072 LCP2Q13094 533 aa12.04□□□□□ -0.48
TPM1-209ENST00000558072 PRKAA1Q13131 559 aa12.04□□□□□ -0.48
TPM1-209ENST00000558072 RCN2Q14257 317 aa12.04□□□□□ -0.48
TPM1-209ENST00000558072 PLCL1Q15111 1095 aa12.04□□□□□ -0.48
TPM1-209ENST00000558072 C14orf28Q4W4Y0 310 aa12.04□□□□□ -0.48
TPM1-209ENST00000558072 EEF1AKMT2Q5JPI9 291 aaKnown RBP12.04□□□□□ -0.48
TPM1-209ENST00000558072 ARMC6Q6NXE6 501 aa12.04□□□□□ -0.48
TPM1-209ENST00000558072 ASCL5Q7RTU5 278 aa12.04□□□□□ -0.48
TPM1-209ENST00000558072 AMIGO1Q86WK6 493 aa12.04□□□□□ -0.48
TPM1-209ENST00000558072 C17orf82Q86X59 251 aaPredicted RBP12.04□□□□□ -0.48
TPM1-209ENST00000558072 CRLF3Q8IUI8 442 aa12.04□□□□□ -0.48
TPM1-209ENST00000558072 FAM181AQ8N9Y4 354 aa12.04□□□□□ -0.48
TPM1-209ENST00000558072 SPDYE1Q8NFV5 336 aaPredicted RBP12.04□□□□□ -0.48
TPM1-209ENST00000558072 OR56A3Q8NH54 315 aa12.04□□□□□ -0.48
TPM1-209ENST00000558072 DLG3Q92796 817 aa12.04□□□□□ -0.48
TPM1-209ENST00000558072 ATP6V1E2Q96A05 226 aa12.04□□□□□ -0.48
TPM1-209ENST00000558072 FAR2Q96K12 515 aa12.04□□□□□ -0.48
TPM1-209ENST00000558072 C7orf26Q96N11 449 aa12.04□□□□□ -0.48
TPM1-209ENST00000558072 SIKE1Q9BRV8 207 aa12.04□□□□□ -0.48
TPM1-209ENST00000558072 HGH1Q9BTY7 390 aa12.04□□□□□ -0.48
TPM1-209ENST00000558072 GTPBP2Q9BX10 602 aaKnown RBP12.04□□□□□ -0.48
TPM1-209ENST00000558072 ILKAPQ9H0C8 392 aaPredicted RBP12.04□□□□□ -0.48
TPM1-209ENST00000558072 SRMSQ9H3Y6 488 aa12.04□□□□□ -0.48
TPM1-209ENST00000558072 SLC40A1Q9NP59 571 aa12.04□□□□□ -0.48
TPM1-209ENST00000558072 MLXIPLQ9NP71 852 aa12.04□□□□□ -0.48
TPM1-209ENST00000558072 DNAJC11Q9NVH1 559 aa12.04□□□□□ -0.48
TPM1-209ENST00000558072 UCKL1Q9NWZ5 548 aa12.04□□□□□ -0.48
TPM1-209ENST00000558072 STOX2Q9P2F5 926 aaPredicted RBP12.04□□□□□ -0.48
TPM1-209ENST00000558072 ADAM21Q9UKJ8 722 aa12.04□□□□□ -0.48
TPM1-209ENST00000558072 DYRK1BQ9Y463 629 aa12.04□□□□□ -0.48
TPM1-209ENST00000558072 PI4KAP42356 2102 aa12.04□□□□□ -0.48
TPM1-209ENST00000558072 ZFC3H1O60293 1989 aaKnown RBP12.03□□□□□ -0.48
TPM1-209ENST00000558072 LILRA5A6NI73 299 aa12.03□□□□□ -0.48
TPM1-209ENST00000558072 OR52A4PA6NMU1 304 aa12.03□□□□□ -0.48
TPM1-209ENST00000558072 RHPN2P1A8MT19 583 aa12.03□□□□□ -0.48
TPM1-209ENST00000558072 B4DGG1 531 aa12.03□□□□□ -0.48
TPM1-209ENST00000558072 NUDT21O43809 227 aaKnown RBP12.03□□□□□ -0.48
TPM1-209ENST00000558072 CCNT2O60583 730 aaKnown RBP12.03□□□□□ -0.48
TPM1-209ENST00000558072 HSPA4LO95757 839 aa12.03□□□□□ -0.48
TPM1-209ENST00000558072 CHEK2O96017 543 aa12.03□□□□□ -0.48
TPM1-209ENST00000558072 RPS17P08708 135 aaKnown RBP12.03□□□□□ -0.48
TPM1-209ENST00000558072 FGF3P11487 239 aaPredicted RBP12.03□□□□□ -0.48
TPM1-209ENST00000558072 PNLIPP16233 465 aa12.03□□□□□ -0.48
TPM1-209ENST00000558072 ENGP17813 658 aa12.03□□□□□ -0.48
TPM1-209ENST00000558072 GNAZP19086 355 aa12.03□□□□□ -0.48
TPM1-209ENST00000558072 BGNP21810 368 aa12.03□□□□□ -0.48
TPM1-209ENST00000558072 CXCR2P25025 360 aa12.03□□□□□ -0.48
TPM1-209ENST00000558072 IMPA1P29218 277 aa12.03□□□□□ -0.48
TPM1-209ENST00000558072 PKLRP30613 574 aa12.03□□□□□ -0.48
TPM1-209ENST00000558072 SLC6A12P48065 614 aa12.03□□□□□ -0.48
TPM1-209ENST00000558072 SLC1A6P48664 564 aa12.03□□□□□ -0.48
TPM1-209ENST00000558072 GNGT1P63211 74 aa12.03□□□□□ -0.48
TPM1-209ENST00000558072 GUCY1A3Q02108 690 aa12.03□□□□□ -0.48
TPM1-209ENST00000558072 NHLH1Q02575 133 aa12.03□□□□□ -0.48
TPM1-209ENST00000558072 CLCQ05315 142 aa12.03□□□□□ -0.48
TPM1-209ENST00000558072 PRKG2Q13237 762 aa12.03□□□□□ -0.48
TPM1-209ENST00000558072 LAPTM5Q13571 262 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms