RNA–Protein interactions for RNA: ENST00000557673.5

NEK9-211, Transcript of NIMA related kinase 9, humanhuman

TSL 3

Gene NEK9, Length 657 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-211ENST00000557673 FRG1Q14331 258 aaKnown RBP16.13■□□□□ 0.17
NEK9-211ENST00000557673 TEX35Q5T0J7 233 aa16.13■□□□□ 0.17
NEK9-211ENST00000557673 RNF187Q5TA31 235 aaPredicted RBP16.13■□□□□ 0.17
NEK9-211ENST00000557673 CLDN19Q8N6F1 224 aa16.13■□□□□ 0.17
NEK9-211ENST00000557673 OR8K5Q8NH50 307 aa16.13■□□□□ 0.17
NEK9-211ENST00000557673 SSC4DQ8WTU2 575 aa16.13■□□□□ 0.17
NEK9-211ENST00000557673 CERS2Q96G23 380 aa16.13■□□□□ 0.17
NEK9-211ENST00000557673 LINC00615Q96LM1 132 aaPredicted RBP16.13■□□□□ 0.17
NEK9-211ENST00000557673 INSM2Q96T92 566 aaPredicted RBP16.13■□□□□ 0.17
NEK9-211ENST00000557673 RHOXF2Q9BQY4 288 aa16.13■□□□□ 0.17
NEK9-211ENST00000557673 FAM167BQ9BTA0 163 aa16.13■□□□□ 0.17
NEK9-211ENST00000557673 FGF21Q9NSA1 209 aa16.13■□□□□ 0.17
NEK9-211ENST00000557673 FARSAQ9Y285 508 aaKnown RBP16.13■□□□□ 0.17
NEK9-211ENST00000557673 PRSS21Q9Y6M0 314 aa16.13■□□□□ 0.17
NEK9-211ENST00000557673 ICE1Q9Y2F5 2266 aa16.13■□□□□ 0.17
NEK9-211ENST00000557673 UNC79Q9P2D8 2635 aa16.13■□□□□ 0.17
NEK9-211ENST00000557673 CPNE3O75131 537 aaKnown RBP16.12■□□□□ 0.17
NEK9-211ENST00000557673 PDGFAP04085 211 aa16.12■□□□□ 0.17
NEK9-211ENST00000557673 SLC35G4P0C7Q5 338 aa16.12■□□□□ 0.17
NEK9-211ENST00000557673 SLC1A2P43004 574 aa16.12■□□□□ 0.17
NEK9-211ENST00000557673 UQCRFS1P47985 274 aa16.12■□□□□ 0.17
NEK9-211ENST00000557673 HSD11B2P80365 405 aa16.12■□□□□ 0.17
NEK9-211ENST00000557673 CUL1Q13616 776 aa16.12■□□□□ 0.17
NEK9-211ENST00000557673 THOC5Q13769 683 aaKnown RBP16.12■□□□□ 0.17
NEK9-211ENST00000557673 PLCL1Q15111 1095 aa16.12■□□□□ 0.17
NEK9-211ENST00000557673 TRMT10BQ6PF06 316 aaKnown RBP16.12■□□□□ 0.17
NEK9-211ENST00000557673 CCDC25Q86WR0 208 aa16.12■□□□□ 0.17
NEK9-211ENST00000557673 HPS6Q86YV9 775 aa16.12■□□□□ 0.17
NEK9-211ENST00000557673 LMNTD2Q8IXW0 634 aa16.12■□□□□ 0.17
NEK9-211ENST00000557673 CFAP206Q8IYR0 622 aa16.12■□□□□ 0.17
NEK9-211ENST00000557673 GSDMBQ8TAX9 411 aa16.12■□□□□ 0.17
NEK9-211ENST00000557673 CALML6Q8TD86 181 aa16.12■□□□□ 0.17
NEK9-211ENST00000557673 LPGAT1Q92604 370 aa16.12■□□□□ 0.17
NEK9-211ENST00000557673 RMDN2Q96LZ7 410 aa16.12■□□□□ 0.17
NEK9-211ENST00000557673 C12orf66Q96MD2 445 aa16.12■□□□□ 0.17
NEK9-211ENST00000557673 TRIM55Q9BYV6 548 aa16.12■□□□□ 0.17
NEK9-211ENST00000557673 ING2Q9H160 280 aa16.12■□□□□ 0.17
NEK9-211ENST00000557673 P2RY12Q9H244 342 aa16.12■□□□□ 0.17
NEK9-211ENST00000557673 MLXIPLQ9NP71 852 aa16.12■□□□□ 0.17
NEK9-211ENST00000557673 ACSL5Q9ULC5 683 aa16.12■□□□□ 0.17
NEK9-211ENST00000557673 ZNF451Q9Y4E5 1061 aa16.12■□□□□ 0.17
NEK9-211ENST00000557673 MYO9AB2RTY4 2548 aa16.11■□□□□ 0.17
NEK9-211ENST00000557673 SPENQ96T58 3664 aaKnown RBP16.11■□□□□ 0.17
NEK9-211ENST00000557673 UBA6A0AVT1 1052 aaPredicted RBP16.11■□□□□ 0.17
NEK9-211ENST00000557673 KLHL33A6NCF5 533 aa16.11■□□□□ 0.17
NEK9-211ENST00000557673 TLCD2A6NGC4 264 aa16.11■□□□□ 0.17
NEK9-211ENST00000557673 QSOX1O00391 747 aa16.11■□□□□ 0.17
NEK9-211ENST00000557673 PRMT5O14744 637 aaPredicted RBP16.11■□□□□ 0.17
NEK9-211ENST00000557673 TIAF1O95411 115 aa16.11■□□□□ 0.17
NEK9-211ENST00000557673 KLK3P07288 261 aaPredicted RBP16.11■□□□□ 0.17
NEK9-211ENST00000557673 ERVK-10P10266 1014 aa16.11■□□□□ 0.17
NEK9-211ENST00000557673 RPS3P23396 243 aaKnown RBP eCLIP16.11■□□□□ 0.17
NEK9-211ENST00000557673 CARSP49589 748 aaKnown RBP16.11■□□□□ 0.17
NEK9-211ENST00000557673 CCL11P51671 97 aa16.11■□□□□ 0.17
NEK9-211ENST00000557673 TUBB4BP68371 445 aa16.11■□□□□ 0.17
NEK9-211ENST00000557673 KCNAB1Q14722 419 aa16.11■□□□□ 0.17
NEK9-211ENST00000557673 ZNF658BQ4V348 819 aaPredicted RBP16.11■□□□□ 0.17
NEK9-211ENST00000557673 HSP90AA5PQ58FG0 334 aa16.11■□□□□ 0.17
NEK9-211ENST00000557673 TMTC4Q5T4D3 741 aa16.11■□□□□ 0.17
NEK9-211ENST00000557673 SDCCAG8Q86SQ7 713 aaPredicted RBP16.11■□□□□ 0.17
NEK9-211ENST00000557673 LRRC6Q86X45 466 aa16.11■□□□□ 0.17
NEK9-211ENST00000557673 DENND6AQ8IWF6 608 aa16.11■□□□□ 0.17
NEK9-211ENST00000557673 CNTN4Q8IWV2 1026 aa16.11■□□□□ 0.17
NEK9-211ENST00000557673 CARFQ8N187 725 aa16.11■□□□□ 0.17
NEK9-211ENST00000557673 HM13Q8TCT9 377 aa16.11■□□□□ 0.17
NEK9-211ENST00000557673 PYROXD1Q8WU10 500 aa16.11■□□□□ 0.17
NEK9-211ENST00000557673 ZFPM2Q8WW38 1151 aa16.11■□□□□ 0.17
NEK9-211ENST00000557673 TCF12Q99081 682 aa16.11■□□□□ 0.17
NEK9-211ENST00000557673 FMO2Q99518 471 aa16.11■□□□□ 0.17
NEK9-211ENST00000557673 VPS37BQ9H9H4 285 aa16.11■□□□□ 0.17
NEK9-211ENST00000557673 INTS10Q9NVR2 710 aaKnown RBP16.11■□□□□ 0.17
NEK9-211ENST00000557673 MTRF1LQ9UGC7 380 aaKnown RBP16.11■□□□□ 0.17
NEK9-211ENST00000557673 MAP4K5Q9Y4K4 846 aa16.11■□□□□ 0.17
NEK9-211ENST00000557673 ARGFXA6NJG6 315 aa16.1■□□□□ 0.17
NEK9-211ENST00000557673 DPM1O60762 260 aa16.1■□□□□ 0.17
NEK9-211ENST00000557673 NDUFS3O75489 264 aa16.1■□□□□ 0.17
NEK9-211ENST00000557673 DDAH2O95865 285 aa16.1■□□□□ 0.17
NEK9-211ENST00000557673 FTH1P02794 183 aa16.1■□□□□ 0.17
NEK9-211ENST00000557673 F7P08709 466 aaPredicted RBP16.1■□□□□ 0.17
NEK9-211ENST00000557673 GSTM1P09488 218 aa16.1■□□□□ 0.17
NEK9-211ENST00000557673 EBLN1P0CF75 366 aa16.1■□□□□ 0.17
NEK9-211ENST00000557673 GSTM4Q03013 218 aa16.1■□□□□ 0.17
NEK9-211ENST00000557673 ARMC6Q6NXE6 501 aa16.1■□□□□ 0.17
NEK9-211ENST00000557673 FAM199XQ6PEV8 388 aaPredicted RBP16.1■□□□□ 0.17
NEK9-211ENST00000557673 TMEM126BQ8IUX1 230 aa16.1■□□□□ 0.17
NEK9-211ENST00000557673 IFT20Q8IY31 132 aa16.1■□□□□ 0.17
NEK9-211ENST00000557673 D2HGDHQ8N465 521 aa16.1■□□□□ 0.17
NEK9-211ENST00000557673 LKAAEAR1Q8TD35 194 aa16.1■□□□□ 0.17
NEK9-211ENST00000557673 IFT81Q8WYA0 676 aa16.1■□□□□ 0.17
NEK9-211ENST00000557673 MR1Q95460 341 aa16.1■□□□□ 0.17
NEK9-211ENST00000557673 MAP3K3Q99759 626 aa16.1■□□□□ 0.17
NEK9-211ENST00000557673 SLC29A3Q9BZD2 475 aa16.1■□□□□ 0.17
NEK9-211ENST00000557673 COG4Q9H9E3 785 aa16.1■□□□□ 0.17
NEK9-211ENST00000557673 IARS2Q9NSE4 1012 aaKnown RBP16.1■□□□□ 0.17
NEK9-211ENST00000557673 SLC17A6Q9P2U8 582 aa16.1■□□□□ 0.17
NEK9-211ENST00000557673 GNPTGQ9UJJ9 305 aa16.1■□□□□ 0.17
NEK9-211ENST00000557673 VPS9D1Q9Y2B5 631 aa16.1■□□□□ 0.17
NEK9-211ENST00000557673 PFDN6O15212 129 aa16.09■□□□□ 0.17
NEK9-211ENST00000557673 SCRG1O75711 98 aa16.09■□□□□ 0.17
NEK9-211ENST00000557673 SORBS2O94875 1100 aaKnown RBP16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms