RNA–Protein interactions for RNA: ENST00000557487.5

SHMT2-232, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 1 (best) BASIC

Gene SHMT2, Length 1,918 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-232ENST00000557487 CCL14Q16627 93 aa15.92■□□□□ 0.14
SHMT2-232ENST00000557487 USP39Q53GS9 565 aaKnown RBP15.92■□□□□ 0.14
SHMT2-232ENST00000557487 CDKL4Q5MAI5 379 aa15.92■□□□□ 0.14
SHMT2-232ENST00000557487 OR2T5Q6IEZ7 315 aa15.92■□□□□ 0.14
SHMT2-232ENST00000557487 TMEM53Q6P2H8 277 aa15.92■□□□□ 0.14
SHMT2-232ENST00000557487 ZNF598Q86UK7 904 aaKnown RBP15.92■□□□□ 0.14
SHMT2-232ENST00000557487 OR7D4Q8NG98 312 aa15.92■□□□□ 0.14
SHMT2-232ENST00000557487 OR2T29Q8NH02 315 aa15.92■□□□□ 0.14
SHMT2-232ENST00000557487 NDNFQ8TB73 568 aa15.92■□□□□ 0.14
SHMT2-232ENST00000557487 RDH14Q9HBH5 336 aa15.92■□□□□ 0.14
SHMT2-232ENST00000557487 PARVBQ9HBI1 364 aa15.92■□□□□ 0.14
SHMT2-232ENST00000557487 LTB4R2Q9NPC1 389 aa15.92■□□□□ 0.14
SHMT2-232ENST00000557487 THG1LQ9NWX6 298 aaKnown RBP15.92■□□□□ 0.14
SHMT2-232ENST00000557487 KIAA1522Q9P206 1035 aaPredicted RBP15.92■□□□□ 0.14
SHMT2-232ENST00000557487 PCDHB14Q9Y5E9 798 aa15.92■□□□□ 0.14
SHMT2-232ENST00000557487 GMPPBQ9Y5P6 360 aa15.92■□□□□ 0.14
SHMT2-232ENST00000557487 TTC34A8MYJ7 566 aa15.91■□□□□ 0.14
SHMT2-232ENST00000557487 MANBAO00462 879 aa15.91■□□□□ 0.14
SHMT2-232ENST00000557487 XPNPEP2O43895 674 aa15.91■□□□□ 0.14
SHMT2-232ENST00000557487 SEC22BO75396 215 aa15.91■□□□□ 0.14
SHMT2-232ENST00000557487 SEC24AO95486 1093 aa15.91■□□□□ 0.14
SHMT2-232ENST00000557487 KRT6AP02538 564 aa15.91■□□□□ 0.14
SHMT2-232ENST00000557487 F11P03951 625 aa15.91■□□□□ 0.14
SHMT2-232ENST00000557487 KRT6BP04259 564 aa15.91■□□□□ 0.14
SHMT2-232ENST00000557487 ACPPP15309 386 aa15.91■□□□□ 0.14
SHMT2-232ENST00000557487 PFKLP17858 780 aa15.91■□□□□ 0.14
SHMT2-232ENST00000557487 EFNA1P20827 205 aaPredicted RBP15.91■□□□□ 0.14
SHMT2-232ENST00000557487 PRKACGP22612 351 aa15.91■□□□□ 0.14
SHMT2-232ENST00000557487 CD6P30203 668 aa15.91■□□□□ 0.14
SHMT2-232ENST00000557487 SERPINB1P30740 379 aa15.91■□□□□ 0.14
SHMT2-232ENST00000557487 RGRP47804 291 aa15.91■□□□□ 0.14
SHMT2-232ENST00000557487 KRT6CP48668 564 aa15.91■□□□□ 0.14
SHMT2-232ENST00000557487 SLC11A2P49281 568 aa15.91■□□□□ 0.14
SHMT2-232ENST00000557487 PLIN5Q00G26 463 aa15.91■□□□□ 0.14
SHMT2-232ENST00000557487 IFITM3Q01628 133 aa15.91■□□□□ 0.14
SHMT2-232ENST00000557487 TAF10Q12962 218 aa15.91■□□□□ 0.14
SHMT2-232ENST00000557487 ABRQ12979 859 aa15.91■□□□□ 0.14
SHMT2-232ENST00000557487 PTRHD1Q6GMV3 140 aaKnown RBP15.91■□□□□ 0.14
SHMT2-232ENST00000557487 ERICH5Q6P6B1 374 aa15.91■□□□□ 0.14
SHMT2-232ENST00000557487 ARMC8Q8IUR7 673 aa15.91■□□□□ 0.14
SHMT2-232ENST00000557487 NETO1Q8TDF5 533 aa15.91■□□□□ 0.14
SHMT2-232ENST00000557487 TESCQ96BS2 214 aa15.91■□□□□ 0.14
SHMT2-232ENST00000557487 CLPBQ9H078 707 aa15.91■□□□□ 0.14
SHMT2-232ENST00000557487 MMP27Q9H306 513 aa15.91■□□□□ 0.14
SHMT2-232ENST00000557487 IL1RAPQ9NPH3 570 aa15.91■□□□□ 0.14
SHMT2-232ENST00000557487 ACOT13Q9NPJ3 140 aa15.91■□□□□ 0.14
SHMT2-232ENST00000557487 DNMT3BQ9UBC3 853 aaKnown RBP15.91■□□□□ 0.14
SHMT2-232ENST00000557487 ZMYM5Q9UJ78 669 aa15.91■□□□□ 0.14
SHMT2-232ENST00000557487 OSGIN1Q9UJX0 560 aa15.91■□□□□ 0.14
SHMT2-232ENST00000557487 RPS6KA6Q9UK32 745 aa15.91■□□□□ 0.14
SHMT2-232ENST00000557487 NDRG4Q9ULP0 352 aaKnown RBP15.91■□□□□ 0.14
SHMT2-232ENST00000557487 AP1M2Q9Y6Q5 423 aa15.91■□□□□ 0.14
SHMT2-232ENST00000557487 TAPBPO15533 448 aa15.9■□□□□ 0.14
SHMT2-232ENST00000557487 GSNP06396 782 aa15.9■□□□□ 0.14
SHMT2-232ENST00000557487 ZDHHC11BP0C7U3 371 aa15.9■□□□□ 0.14
SHMT2-232ENST00000557487 HOXB9P17482 250 aaPredicted RBP15.9■□□□□ 0.14
SHMT2-232ENST00000557487 MAPK1P28482 360 aa15.9■□□□□ 0.14
SHMT2-232ENST00000557487 S100A3P33764 101 aa15.9■□□□□ 0.14
SHMT2-232ENST00000557487 HSPA7P48741 367 aa15.9■□□□□ 0.14
SHMT2-232ENST00000557487 DSC1Q08554 894 aa15.9■□□□□ 0.14
SHMT2-232ENST00000557487 SMARCB1Q12824 385 aa15.9■□□□□ 0.14
SHMT2-232ENST00000557487 ZNF181Q2M3W8 571 aa15.9■□□□□ 0.14
SHMT2-232ENST00000557487 PROX2Q3B8N5 592 aa15.9■□□□□ 0.14
SHMT2-232ENST00000557487 UBE2UQ5VVX9 321 aa15.9■□□□□ 0.14
SHMT2-232ENST00000557487 LYPLAL1Q5VWZ2 237 aa15.9■□□□□ 0.14
SHMT2-232ENST00000557487 CES5AQ6NT32 575 aa15.9■□□□□ 0.14
SHMT2-232ENST00000557487 GLB1LQ6UWU2 654 aa15.9■□□□□ 0.14
SHMT2-232ENST00000557487 CHST9Q7L1S5 443 aa15.9■□□□□ 0.14
SHMT2-232ENST00000557487 SERPINA11Q86U17 422 aa15.9■□□□□ 0.14
SHMT2-232ENST00000557487 PLD3Q8IV08 490 aa15.9■□□□□ 0.14
SHMT2-232ENST00000557487 LGALS12Q96DT0 336 aa15.9■□□□□ 0.14
SHMT2-232ENST00000557487 MYEOVQ96EZ4 313 aa15.9■□□□□ 0.14
SHMT2-232ENST00000557487 DACH2Q96NX9 599 aa15.9■□□□□ 0.14
SHMT2-232ENST00000557487 HBEGFQ99075 208 aa15.9■□□□□ 0.14
SHMT2-232ENST00000557487 PITX2Q99697 317 aa15.9■□□□□ 0.14
SHMT2-232ENST00000557487 ZBED2Q9BTP6 218 aa15.9■□□□□ 0.14
SHMT2-232ENST00000557487 SPON2Q9BUD6 331 aa15.9■□□□□ 0.14
SHMT2-232ENST00000557487 SLIRPQ9GZT3 109 aaKnown RBP15.9■□□□□ 0.14
SHMT2-232ENST00000557487 NSUN3Q9H649 340 aaKnown RBP15.9■□□□□ 0.14
SHMT2-232ENST00000557487 WWOXQ9NZC7 414 aa15.9■□□□□ 0.14
SHMT2-232ENST00000557487 UTS2RQ9UKP6 389 aa15.9■□□□□ 0.14
SHMT2-232ENST00000557487 ZNF490Q9ULM2 529 aaPredicted RBP15.9■□□□□ 0.14
SHMT2-232ENST00000557487 CCL5P13501 91 aa15.9■□□□□ 0.14
SHMT2-232ENST00000557487 PSMB9P28065 219 aa15.9■□□□□ 0.14
SHMT2-232ENST00000557487 RPS14P62263 151 aaKnown RBP15.9■□□□□ 0.14
SHMT2-232ENST00000557487 KRR1Q13601 381 aaKnown RBP15.9■□□□□ 0.14
SHMT2-232ENST00000557487 MAD2L1BPQ15013 274 aaPredicted RBP15.9■□□□□ 0.14
SHMT2-232ENST00000557487 DEPDC1Q5TB30 811 aa15.9■□□□□ 0.14
SHMT2-232ENST00000557487 MFSD14CQ5VZR4 134 aa15.9■□□□□ 0.14
SHMT2-232ENST00000557487 CYP4Z1Q86W10 505 aa15.9■□□□□ 0.14
SHMT2-232ENST00000557487 RGL4Q8IZJ4 473 aa15.9■□□□□ 0.14
SHMT2-232ENST00000557487 RBFAQ8N0V3 343 aa15.9■□□□□ 0.14
SHMT2-232ENST00000557487 ULK4Q96C45 1275 aa15.9■□□□□ 0.14
SHMT2-232ENST00000557487 TMEM106CQ9BVX2 250 aa15.9■□□□□ 0.14
SHMT2-232ENST00000557487 DSN1Q9H410 356 aa15.9■□□□□ 0.14
SHMT2-232ENST00000557487 RIBC2Q9H4K1 309 aa15.9■□□□□ 0.14
SHMT2-232ENST00000557487 IL17CQ9P0M4 197 aa15.9■□□□□ 0.14
SHMT2-232ENST00000557487 KLQ9UEF7 1012 aa15.9■□□□□ 0.14
SHMT2-232ENST00000557487 PMF1-BGLAPU3KQ54 211 aa15.9■□□□□ 0.14
SHMT2-232ENST00000557487 SCN10AQ9Y5Y9 1956 aa15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms