RNA–Protein interactions for RNA: ENST00000557030.5

ATXN3-246, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 807 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-246ENST00000557030 PRKCHP24723 683 aa4.68□□□□□ -1.66
ATXN3-246ENST00000557030 IDUAP35475 653 aa4.68□□□□□ -1.66
ATXN3-246ENST00000557030 MAGEA6P43360 314 aa4.68□□□□□ -1.66
ATXN3-246ENST00000557030 NAMPTP43490 491 aa4.68□□□□□ -1.66
ATXN3-246ENST00000557030 AGTR2P50052 363 aa4.68□□□□□ -1.66
ATXN3-246ENST00000557030 OAZ1P54368 228 aa4.68□□□□□ -1.66
ATXN3-246ENST00000557030 HMGCS2P54868 508 aa4.68□□□□□ -1.66
ATXN3-246ENST00000557030 AQP5P55064 265 aa4.68□□□□□ -1.66
ATXN3-246ENST00000557030 RPL7AP62424 266 aaKnown RBP4.68□□□□□ -1.66
ATXN3-246ENST00000557030 BASP1P80723 227 aaKnown RBP4.68□□□□□ -1.66
ATXN3-246ENST00000557030 CNTN2Q02246 1040 aa4.68□□□□□ -1.66
ATXN3-246ENST00000557030 SLC25A11Q02978 314 aaKnown RBP4.68□□□□□ -1.66
ATXN3-246ENST00000557030 BST1Q10588 318 aa4.68□□□□□ -1.66
ATXN3-246ENST00000557030 CBFBQ13951 182 aa4.68□□□□□ -1.66
ATXN3-246ENST00000557030 DPYSL3Q14195 570 aa4.68□□□□□ -1.66
ATXN3-246ENST00000557030 KCNJ11Q14654 390 aa4.68□□□□□ -1.66
ATXN3-246ENST00000557030 EFTUD2Q15029 972 aaKnown RBP eCLIP4.68□□□□□ -1.66
ATXN3-246ENST00000557030 TWIST1Q15672 202 aa4.68□□□□□ -1.66
ATXN3-246ENST00000557030 CHI3L2Q15782 390 aa4.68□□□□□ -1.66
ATXN3-246ENST00000557030 FAM110CQ1W6H9 321 aa4.68□□□□□ -1.66
ATXN3-246ENST00000557030 KBTBD12Q3ZCT8 623 aa4.68□□□□□ -1.66
ATXN3-246ENST00000557030 ANKRD20A4Q4UJ75 823 aa4.68□□□□□ -1.66
ATXN3-246ENST00000557030 TEX44Q53QW1 395 aa4.68□□□□□ -1.66
ATXN3-246ENST00000557030 FSCBQ5H9T9 825 aa4.68□□□□□ -1.66
ATXN3-246ENST00000557030 CFAP157Q5JU67 520 aa4.68□□□□□ -1.66
ATXN3-246ENST00000557030 ANKRD22Q5VYY1 191 aa4.68□□□□□ -1.66
ATXN3-246ENST00000557030 SNRNP48Q6IEG0 339 aaKnown RBP4.68□□□□□ -1.66
ATXN3-246ENST00000557030 LIN54Q6MZP7 749 aa4.68□□□□□ -1.66
ATXN3-246ENST00000557030 JMJD6Q6NYC1 403 aaPredicted RBP4.68□□□□□ -1.66
ATXN3-246ENST00000557030 TIFABQ6ZNK6 161 aa4.68□□□□□ -1.66
ATXN3-246ENST00000557030 SH2D5Q6ZV89 423 aa4.68□□□□□ -1.66
ATXN3-246ENST00000557030 CYS1Q717R9 158 aa4.68□□□□□ -1.66
ATXN3-246ENST00000557030 PRPF39Q86UA1 669 aaKnown RBP4.68□□□□□ -1.66
ATXN3-246ENST00000557030 ZNF354CQ86Y25 554 aa4.68□□□□□ -1.66
ATXN3-246ENST00000557030 WDR49Q8IV35 697 aa4.68□□□□□ -1.66
ATXN3-246ENST00000557030 ARID3BQ8IVW6 561 aaPredicted RBP4.68□□□□□ -1.66
ATXN3-246ENST00000557030 MAP7D3Q8IWC1 876 aa4.68□□□□□ -1.66
ATXN3-246ENST00000557030 KCTD6Q8NC69 237 aa4.68□□□□□ -1.66
ATXN3-246ENST00000557030 ICA1LQ8NDH6 482 aa4.68□□□□□ -1.66
ATXN3-246ENST00000557030 MCUQ8NE86 351 aa4.68□□□□□ -1.66
ATXN3-246ENST00000557030 OR1N1Q8NGS0 311 aa4.68□□□□□ -1.66
ATXN3-246ENST00000557030 STT3BQ8TCJ2 826 aa4.68□□□□□ -1.66
ATXN3-246ENST00000557030 PPP4R1Q8TF05 950 aa4.68□□□□□ -1.66
ATXN3-246ENST00000557030 DDI1Q8WTU0 396 aa4.68□□□□□ -1.66
ATXN3-246ENST00000557030 NAT14Q8WUY8 206 aa4.68□□□□□ -1.66
ATXN3-246ENST00000557030 TRAPPC12Q8WVT3 735 aa4.68□□□□□ -1.66
ATXN3-246ENST00000557030 IRGQQ8WZA9 623 aa4.68□□□□□ -1.66
ATXN3-246ENST00000557030 FAF2Q96CS3 445 aa4.68□□□□□ -1.66
ATXN3-246ENST00000557030 EID2BQ96D98 161 aa4.68□□□□□ -1.66
ATXN3-246ENST00000557030 DGCR14Q96DF8 476 aaKnown RBP4.68□□□□□ -1.66
ATXN3-246ENST00000557030 RTP4Q96DX8 246 aa4.68□□□□□ -1.66
ATXN3-246ENST00000557030 SERAC1Q96JX3 654 aa4.68□□□□□ -1.66
ATXN3-246ENST00000557030 RILPQ96NA2 401 aa4.68□□□□□ -1.66
ATXN3-246ENST00000557030 PANX3Q96QZ0 392 aa4.68□□□□□ -1.66
ATXN3-246ENST00000557030 KCNK16Q96T55 309 aa4.68□□□□□ -1.66
ATXN3-246ENST00000557030 THTPAQ9BU02 230 aa4.68□□□□□ -1.66
ATXN3-246ENST00000557030 MSTO1Q9BUK6 570 aa4.68□□□□□ -1.66
ATXN3-246ENST00000557030 KIFC3Q9BVG8 833 aa4.68□□□□□ -1.66
ATXN3-246ENST00000557030 CCDC106Q9BWC9 280 aa4.68□□□□□ -1.66
ATXN3-246ENST00000557030 GATA5Q9BWX5 397 aaPredicted RBP4.68□□□□□ -1.66
ATXN3-246ENST00000557030 POLR3FQ9H1D9 316 aaPredicted RBP4.68□□□□□ -1.66
ATXN3-246ENST00000557030 APOBEC3GQ9HC16 384 aaKnown RBP4.68□□□□□ -1.66
ATXN3-246ENST00000557030 FBXO6Q9NRD1 293 aaPredicted RBP4.68□□□□□ -1.66
ATXN3-246ENST00000557030 SAGE1Q9NXZ1 904 aa4.68□□□□□ -1.66
ATXN3-246ENST00000557030 SLC7A8Q9UHI5 535 aa4.68□□□□□ -1.66
ATXN3-246ENST00000557030 RAB26Q9ULW5 256 aa4.68□□□□□ -1.66
ATXN3-246ENST00000557030 GTF2A1LQ9UNN4 478 aa4.68□□□□□ -1.66
ATXN3-246ENST00000557030 CHMP2BQ9UQN3 213 aa4.68□□□□□ -1.66
ATXN3-246ENST00000557030 GPR52Q9Y2T5 361 aa4.68□□□□□ -1.66
ATXN3-246ENST00000557030 HBS1LQ9Y450 684 aaKnown RBP4.68□□□□□ -1.66
ATXN3-246ENST00000557030 TTLL3Q9Y4R7 772 aa4.68□□□□□ -1.66
ATXN3-246ENST00000557030 GMEB1Q9Y692 573 aa4.68□□□□□ -1.66
ATXN3-246ENST00000557030 SIRT4Q9Y6E7 314 aaPredicted RBP4.68□□□□□ -1.66
ATXN3-246ENST00000557030 TEX264Q9Y6I9 313 aa4.68□□□□□ -1.66
ATXN3-246ENST00000557030 LOC285556D6RIA3 1793 aa4.68□□□□□ -1.66
ATXN3-246ENST00000557030 SBF1O95248 1867 aa4.67□□□□□ -1.66
ATXN3-246ENST00000557030 FAM237BA0A1B0GVD1 139 aa4.67□□□□□ -1.66
ATXN3-246ENST00000557030 GLTPD2A6NH11 291 aa4.67□□□□□ -1.66
ATXN3-246ENST00000557030 SDR42E2A6NKP2 422 aa4.67□□□□□ -1.66
ATXN3-246ENST00000557030 KRTAP29-1A8MX34 341 aaPredicted RBP4.67□□□□□ -1.66
ATXN3-246ENST00000557030 C19orf81C9J6K1 198 aa4.67□□□□□ -1.66
ATXN3-246ENST00000557030 GOLGA8RI6L899 631 aa4.67□□□□□ -1.66
ATXN3-246ENST00000557030 M0QYT0 321 aa4.67□□□□□ -1.66
ATXN3-246ENST00000557030 CASQ2O14958 399 aaPredicted RBP4.67□□□□□ -1.66
ATXN3-246ENST00000557030 DENRO43583 198 aaKnown RBP4.67□□□□□ -1.66
ATXN3-246ENST00000557030 GLRA3O75311 464 aa4.67□□□□□ -1.66
ATXN3-246ENST00000557030 BANF1O75531 89 aa4.67□□□□□ -1.66
ATXN3-246ENST00000557030 RPP40O75818 363 aaKnown RBP4.67□□□□□ -1.66
ATXN3-246ENST00000557030 TNFAIP8O95379 198 aa4.67□□□□□ -1.66
ATXN3-246ENST00000557030 PLAUP00749 431 aa4.67□□□□□ -1.66
ATXN3-246ENST00000557030 CALCAP01258 141 aa4.67□□□□□ -1.66
ATXN3-246ENST00000557030 APOEP02649 317 aa4.67□□□□□ -1.66
ATXN3-246ENST00000557030 SERPINE1P05121 402 aa4.67□□□□□ -1.66
ATXN3-246ENST00000557030 SUPT20HL2P0C7V6 817 aa4.67□□□□□ -1.66
ATXN3-246ENST00000557030 ZCCHC18P0CG32 403 aa4.67□□□□□ -1.66
ATXN3-246ENST00000557030 CPA3P15088 417 aa4.67□□□□□ -1.66
ATXN3-246ENST00000557030 TPSB2P20231 275 aa4.67□□□□□ -1.66
ATXN3-246ENST00000557030 TGM2P21980 687 aa4.67□□□□□ -1.66
ATXN3-246ENST00000557030 ICAM3P32942 547 aa4.67□□□□□ -1.66
ATXN3-246ENST00000557030 RPL5P46777 297 aaKnown RBP4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms