RNA–Protein interactions for RNA: ENST00000556571.1

ACTN1-221, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 568 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-221ENST00000556571 OLIG2Q13516 323 aa11.41□□□□□ -0.58
ACTN1-221ENST00000556571 TCEAL1Q15170 157 aa11.41□□□□□ -0.58
ACTN1-221ENST00000556571 RBBP7Q16576 425 aa11.41□□□□□ -0.58
ACTN1-221ENST00000556571 YOD1Q5VVQ6 348 aaPredicted RBP11.41□□□□□ -0.58
ACTN1-221ENST00000556571 LINC00696Q6ZRV3 163 aa11.41□□□□□ -0.58
ACTN1-221ENST00000556571 TAS2R42Q7RTR8 314 aa11.41□□□□□ -0.58
ACTN1-221ENST00000556571 GDF7Q7Z4P5 450 aa11.41□□□□□ -0.58
ACTN1-221ENST00000556571 TMTC1Q8IUR5 882 aa11.41□□□□□ -0.58
ACTN1-221ENST00000556571 MCATQ8IVS2 390 aaKnown RBP11.41□□□□□ -0.58
ACTN1-221ENST00000556571 RCOR2Q8IZ40 523 aa11.41□□□□□ -0.58
ACTN1-221ENST00000556571 OR1N1Q8NGS0 311 aa11.41□□□□□ -0.58
ACTN1-221ENST00000556571 OR5K2Q8NHB8 316 aa11.41□□□□□ -0.58
ACTN1-221ENST00000556571 THOC3Q96J01 351 aaKnown RBP11.41□□□□□ -0.58
ACTN1-221ENST00000556571 TRIM56Q9BRZ2 755 aaKnown RBP11.41□□□□□ -0.58
ACTN1-221ENST00000556571 RBSNQ9H1K0 784 aa11.41□□□□□ -0.58
ACTN1-221ENST00000556571 CHST11Q9NPF2 352 aa11.41□□□□□ -0.58
ACTN1-221ENST00000556571 ABHD10Q9NUJ1 306 aa11.41□□□□□ -0.58
ACTN1-221ENST00000556571 IL1RAPL1Q9NZN1 696 aa11.41□□□□□ -0.58
ACTN1-221ENST00000556571 FEZ2Q9UHY8 353 aaPredicted RBP11.41□□□□□ -0.58
ACTN1-221ENST00000556571 HIVEP1P15822 2718 aa11.41□□□□□ -0.58
ACTN1-221ENST00000556571 ADGRG4Q8IZF6 3080 aa11.41□□□□□ -0.58
ACTN1-221ENST00000556571 H7C0C1 242 aa11.4□□□□□ -0.58
ACTN1-221ENST00000556571 H7C0S8 307 aa11.4□□□□□ -0.58
ACTN1-221ENST00000556571 QSOX1O00391 747 aa11.4□□□□□ -0.58
ACTN1-221ENST00000556571 CCL22O00626 93 aa11.4□□□□□ -0.58
ACTN1-221ENST00000556571 PCDH17O14917 1159 aa11.4□□□□□ -0.58
ACTN1-221ENST00000556571 DSCR3O14972 297 aa11.4□□□□□ -0.58
ACTN1-221ENST00000556571 NSG1P42857 185 aa11.4□□□□□ -0.58
ACTN1-221ENST00000556571 ATP5OP48047 213 aa11.4□□□□□ -0.58
ACTN1-221ENST00000556571 ZNF324BQ6AW86 544 aaPredicted RBP11.4□□□□□ -0.58
ACTN1-221ENST00000556571 DENND5AQ6IQ26 1287 aa11.4□□□□□ -0.58
ACTN1-221ENST00000556571 BBS12Q6ZW61 710 aa11.4□□□□□ -0.58
ACTN1-221ENST00000556571 KATNAL2Q8IYT4 538 aa11.4□□□□□ -0.58
ACTN1-221ENST00000556571 CATSPER1Q8NEC5 780 aa11.4□□□□□ -0.58
ACTN1-221ENST00000556571 OR11G2Q8NGC1 345 aa11.4□□□□□ -0.58
ACTN1-221ENST00000556571 ITLN2Q8WWU7 325 aaPredicted RBP11.4□□□□□ -0.58
ACTN1-221ENST00000556571 ELMO1Q92556 727 aa11.4□□□□□ -0.58
ACTN1-221ENST00000556571 SLC22A18Q96BI1 424 aa11.4□□□□□ -0.58
ACTN1-221ENST00000556571 LRRC45Q96CN5 670 aa11.4□□□□□ -0.58
ACTN1-221ENST00000556571 DNAJC1Q96KC8 554 aaKnown RBP11.4□□□□□ -0.58
ACTN1-221ENST00000556571 PPP1R2P1Q96PQ5 205 aa11.4□□□□□ -0.58
ACTN1-221ENST00000556571 ARNT2Q9HBZ2 717 aa11.4□□□□□ -0.58
ACTN1-221ENST00000556571 LUC7LQ9NQ29 371 aaKnown RBP11.4□□□□□ -0.58
ACTN1-221ENST00000556571 CUTCQ9NTM9 273 aa11.4□□□□□ -0.58
ACTN1-221ENST00000556571 SMARCAL1Q9NZC9 954 aa11.4□□□□□ -0.58
ACTN1-221ENST00000556571 SUCOQ9UBS9 1254 aaKnown RBP11.4□□□□□ -0.58
ACTN1-221ENST00000556571 ZFHX3Q15911 3703 aa11.4□□□□□ -0.58
ACTN1-221ENST00000556571 PCM1Q15154 2024 aa11.4□□□□□ -0.59
ACTN1-221ENST00000556571 DYTNA2CJ06 578 aa11.39□□□□□ -0.59
ACTN1-221ENST00000556571 BHMG1C9JSJ3 638 aaPredicted RBP11.39□□□□□ -0.59
ACTN1-221ENST00000556571 APOC4-APOC2K7ER74 178 aa11.39□□□□□ -0.59
ACTN1-221ENST00000556571 STK10O94804 968 aaKnown RBP11.39□□□□□ -0.59
ACTN1-221ENST00000556571 KLHL18O94889 574 aa11.39□□□□□ -0.59
ACTN1-221ENST00000556571 APOC2P02655 101 aa11.39□□□□□ -0.59
ACTN1-221ENST00000556571 FTH1P02794 183 aa11.39□□□□□ -0.59
ACTN1-221ENST00000556571 MAGP20916 626 aa11.39□□□□□ -0.59
ACTN1-221ENST00000556571 PSMB4P28070 264 aa11.39□□□□□ -0.59
ACTN1-221ENST00000556571 PEBP1P30086 187 aaKnown RBP11.39□□□□□ -0.59
ACTN1-221ENST00000556571 CARSP49589 748 aaKnown RBP11.39□□□□□ -0.59
ACTN1-221ENST00000556571 TDGF1P3P51864 188 aa11.39□□□□□ -0.59
ACTN1-221ENST00000556571 KCNK10P57789 538 aa11.39□□□□□ -0.59
ACTN1-221ENST00000556571 ARG2P78540 354 aa11.39□□□□□ -0.59
ACTN1-221ENST00000556571 CACNG1Q06432 222 aa11.39□□□□□ -0.59
ACTN1-221ENST00000556571 Q0VFX4 171 aa11.39□□□□□ -0.59
ACTN1-221ENST00000556571 GRM7Q14831 915 aa11.39□□□□□ -0.59
ACTN1-221ENST00000556571 BRD3Q15059 726 aa11.39□□□□□ -0.59
ACTN1-221ENST00000556571 INAQ16352 499 aa11.39□□□□□ -0.59
ACTN1-221ENST00000556571 DBN1Q16643 649 aa11.39□□□□□ -0.59
ACTN1-221ENST00000556571 ZC3H12BQ5HYM0 836 aaKnown RBP11.39□□□□□ -0.59
ACTN1-221ENST00000556571 TCTE1Q5JU00 501 aa11.39□□□□□ -0.59
ACTN1-221ENST00000556571 ANKRD20A2Q5SQ80 823 aa11.39□□□□□ -0.59
ACTN1-221ENST00000556571 ANKRD20A1Q5TYW2 823 aa11.39□□□□□ -0.59
ACTN1-221ENST00000556571 ANKRD20A3Q5VUR7 823 aa11.39□□□□□ -0.59
ACTN1-221ENST00000556571 MTFR2Q6P444 385 aa11.39□□□□□ -0.59
ACTN1-221ENST00000556571 SHISA6Q6ZSJ9 500 aa11.39□□□□□ -0.59
ACTN1-221ENST00000556571 COX15Q7KZN9 410 aa11.39□□□□□ -0.59
ACTN1-221ENST00000556571 CCDC50Q8IVM0 306 aa11.39□□□□□ -0.59
ACTN1-221ENST00000556571 PIANPQ8IYJ0 282 aa11.39□□□□□ -0.59
ACTN1-221ENST00000556571 NR4A3Q92570 626 aa11.39□□□□□ -0.59
ACTN1-221ENST00000556571 LURAP1Q96LR2 239 aa11.39□□□□□ -0.59
ACTN1-221ENST00000556571 MAGEB10Q96LZ2 347 aaPredicted RBP11.39□□□□□ -0.59
ACTN1-221ENST00000556571 TBL1YQ9BQ87 522 aa11.39□□□□□ -0.59
ACTN1-221ENST00000556571 SOX17Q9H6I2 414 aaPredicted RBP11.39□□□□□ -0.59
ACTN1-221ENST00000556571 C10orf88Q9H8K7 445 aa11.39□□□□□ -0.59
ACTN1-221ENST00000556571 ENAMQ9NRM1 1142 aa11.39□□□□□ -0.59
ACTN1-221ENST00000556571 SPTLC3Q9NUV7 552 aa11.39□□□□□ -0.59
ACTN1-221ENST00000556571 INTS7Q9NVH2 962 aaKnown RBP11.39□□□□□ -0.59
ACTN1-221ENST00000556571 NLE1Q9NVX2 485 aaPredicted RBP11.39□□□□□ -0.59
ACTN1-221ENST00000556571 INTUQ9ULD6 942 aa11.39□□□□□ -0.59
ACTN1-221ENST00000556571 PLAGL1Q9UM63 463 aa11.39□□□□□ -0.59
ACTN1-221ENST00000556571 KLHL20Q9Y2M5 609 aa11.39□□□□□ -0.59
ACTN1-221ENST00000556571 ALG6Q9Y672 507 aa11.39□□□□□ -0.59
ACTN1-221ENST00000556571 ITPR3Q14573 2671 aa11.39□□□□□ -0.59
ACTN1-221ENST00000556571 TACC2O95359 2948 aa11.38□□□□□ -0.59
ACTN1-221ENST00000556571 TRAV17A0A0B4J275 112 aa11.38□□□□□ -0.59
ACTN1-221ENST00000556571 SLC5A10A0PJK1 596 aa11.38□□□□□ -0.59
ACTN1-221ENST00000556571 VSTM2BA6NLU5 285 aa11.38□□□□□ -0.59
ACTN1-221ENST00000556571 KRT38O76015 456 aa11.38□□□□□ -0.59
ACTN1-221ENST00000556571 USP1O94782 785 aa11.38□□□□□ -0.59
ACTN1-221ENST00000556571 HPP00738 406 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms