RNA–Protein interactions for RNA: ENST00000556486.5

SCFD1-220, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 974 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-220ENST00000556486 TNNT3P45378 269 aaPredicted RBP9.7□□□□□ -0.86
SCFD1-220ENST00000556486 DYNLT1P63172 113 aa9.7□□□□□ -0.86
SCFD1-220ENST00000556486 ADCY2Q08462 1091 aa9.7□□□□□ -0.86
SCFD1-220ENST00000556486 XRCC4Q13426 336 aa9.7□□□□□ -0.86
SCFD1-220ENST00000556486 NOMO1Q15155 1222 aa9.7□□□□□ -0.86
SCFD1-220ENST00000556486 PTCHD3Q3KNS1 767 aa9.7□□□□□ -0.86
SCFD1-220ENST00000556486 ODF2Q5BJF6 829 aa9.7□□□□□ -0.86
SCFD1-220ENST00000556486 DNTTIP2Q5QJE6 756 aaKnown RBP9.7□□□□□ -0.86
SCFD1-220ENST00000556486 TMEM220Q6QAJ8 160 aa9.7□□□□□ -0.86
SCFD1-220ENST00000556486 FAM151BQ6UXP7 276 aa9.7□□□□□ -0.86
SCFD1-220ENST00000556486 RANBP10Q6VN20 620 aa9.7□□□□□ -0.86
SCFD1-220ENST00000556486 SPOCD1Q6ZMY3 1216 aa9.7□□□□□ -0.86
SCFD1-220ENST00000556486 CUZD1Q86UP6 607 aa9.7□□□□□ -0.86
SCFD1-220ENST00000556486 OOSP2Q86WS3 158 aa9.7□□□□□ -0.86
SCFD1-220ENST00000556486 TMEM151BQ8IW70 566 aa9.7□□□□□ -0.86
SCFD1-220ENST00000556486 KATNAL2Q8IYT4 538 aa9.7□□□□□ -0.86
SCFD1-220ENST00000556486 P3H4Q92791 437 aa9.7□□□□□ -0.86
SCFD1-220ENST00000556486 ZNF501Q96CX3 271 aaPredicted RBP9.7□□□□□ -0.86
SCFD1-220ENST00000556486 LURAP1Q96LR2 239 aa9.7□□□□□ -0.86
SCFD1-220ENST00000556486 QKIQ96PU8 341 aaKnown RBP eCLIP9.7□□□□□ -0.863e-7■■■■■ 29.3
SCFD1-220ENST00000556486 SMAD5Q99717 465 aaKnown RBP9.7□□□□□ -0.86
SCFD1-220ENST00000556486 MDFIQ99750 246 aa9.7□□□□□ -0.86
SCFD1-220ENST00000556486 ANP32EQ9BTT0 268 aa9.7□□□□□ -0.86
SCFD1-220ENST00000556486 TLR10Q9BXR5 811 aa9.7□□□□□ -0.86
SCFD1-220ENST00000556486 NHEJ1Q9H9Q4 299 aaPredicted RBP9.7□□□□□ -0.86
SCFD1-220ENST00000556486 UGT1A7Q9HAW7 530 aa9.7□□□□□ -0.86
SCFD1-220ENST00000556486 UGT1A10Q9HAW8 530 aa9.7□□□□□ -0.86
SCFD1-220ENST00000556486 UGT1A8Q9HAW9 530 aa9.7□□□□□ -0.86
SCFD1-220ENST00000556486 SYTL2Q9HCH5 934 aa9.7□□□□□ -0.86
SCFD1-220ENST00000556486 SPTLC3Q9NUV7 552 aa9.7□□□□□ -0.86
SCFD1-220ENST00000556486 HRASLS2Q9NWW9 162 aa9.7□□□□□ -0.86
SCFD1-220ENST00000556486 KLHL8Q9P2G9 620 aaPredicted RBP9.7□□□□□ -0.86
SCFD1-220ENST00000556486 SLC24A2Q9UI40 661 aa9.7□□□□□ -0.86
SCFD1-220ENST00000556486 MCM8Q9UJA3 840 aa9.7□□□□□ -0.86
SCFD1-220ENST00000556486 PSMD13Q9UNM6 376 aa9.7□□□□□ -0.86
SCFD1-220ENST00000556486 hCG_1818297A0A087WSY0 165 aa9.69□□□□□ -0.86
SCFD1-220ENST00000556486 C17orf113A0A1B0GUU1 675 aa9.69□□□□□ -0.86
SCFD1-220ENST00000556486 UBA6A0AVT1 1052 aaPredicted RBP9.69□□□□□ -0.86
SCFD1-220ENST00000556486 PRAMEF27A3QJZ7 478 aa9.69□□□□□ -0.86
SCFD1-220ENST00000556486 C5orf60A6NFR6 353 aa9.69□□□□□ -0.86
SCFD1-220ENST00000556486 OR2AG2A6NM03 316 aa9.69□□□□□ -0.86
SCFD1-220ENST00000556486 CBFA2T2O43439 604 aa9.69□□□□□ -0.86
SCFD1-220ENST00000556486 SPOPO43791 374 aa9.69□□□□□ -0.86
SCFD1-220ENST00000556486 ALOX12BO75342 701 aa9.69□□□□□ -0.86
SCFD1-220ENST00000556486 PRAMEF1O95521 474 aa9.69□□□□□ -0.86
SCFD1-220ENST00000556486 CTSBP07858 339 aa9.69□□□□□ -0.86
SCFD1-220ENST00000556486 RAB40ALP0C0E4 278 aa9.69□□□□□ -0.86
SCFD1-220ENST00000556486 NDUFS1P28331 727 aa9.69□□□□□ -0.86
SCFD1-220ENST00000556486 ADRA1AP35348 466 aa9.69□□□□□ -0.86
SCFD1-220ENST00000556486 RORAP35398 523 aa9.69□□□□□ -0.86
SCFD1-220ENST00000556486 GSDMDP57764 484 aa9.69□□□□□ -0.86
SCFD1-220ENST00000556486 ABRQ12979 859 aa9.69□□□□□ -0.86
SCFD1-220ENST00000556486 MSLNQ13421 630 aaPredicted RBP9.69□□□□□ -0.86
SCFD1-220ENST00000556486 PLCL1Q15111 1095 aa9.69□□□□□ -0.86
SCFD1-220ENST00000556486 TAF1AQ15573 450 aaPredicted RBP9.69□□□□□ -0.86
SCFD1-220ENST00000556486 ZNF658BQ4V348 819 aaPredicted RBP9.69□□□□□ -0.86
SCFD1-220ENST00000556486 PLEKHS1Q5SXH7 462 aa9.69□□□□□ -0.86
SCFD1-220ENST00000556486 FNBP1LQ5T0N5 605 aa9.69□□□□□ -0.86
SCFD1-220ENST00000556486 VWA5B1Q5TIE3 1220 aa9.69□□□□□ -0.86
SCFD1-220ENST00000556486 LYPLAL1Q5VWZ2 237 aa9.69□□□□□ -0.86
SCFD1-220ENST00000556486 FAM198BQ6UWH4 519 aa9.69□□□□□ -0.86
SCFD1-220ENST00000556486 BBS12Q6ZW61 710 aa9.69□□□□□ -0.86
SCFD1-220ENST00000556486 B4GALNT4Q76KP1 1039 aa9.69□□□□□ -0.86
SCFD1-220ENST00000556486 PID1Q7Z2X4 250 aa9.69□□□□□ -0.86
SCFD1-220ENST00000556486 HPS6Q86YV9 775 aa9.69□□□□□ -0.86
SCFD1-220ENST00000556486 VSTM4Q8IW00 320 aa9.69□□□□□ -0.86
SCFD1-220ENST00000556486 KLHDC8BQ8IXV7 354 aa9.69□□□□□ -0.86
SCFD1-220ENST00000556486 ZNF398Q8TD17 642 aa9.69□□□□□ -0.86
SCFD1-220ENST00000556486 BLOC1S5Q8TDH9 187 aa9.69□□□□□ -0.86
SCFD1-220ENST00000556486 NUDT8Q8WV74 236 aa9.69□□□□□ -0.86
SCFD1-220ENST00000556486 CLIP3Q96DZ5 547 aa9.69□□□□□ -0.86
SCFD1-220ENST00000556486 WDR89Q96FK6 387 aaPredicted RBP9.69□□□□□ -0.86
SCFD1-220ENST00000556486 GORASP1Q9BQQ3 440 aa9.69□□□□□ -0.86
SCFD1-220ENST00000556486 PITPNM3Q9BZ71 974 aa9.69□□□□□ -0.86
SCFD1-220ENST00000556486 GBA3Q9H227 469 aa9.69□□□□□ -0.86
SCFD1-220ENST00000556486 C1GALT1Q9NS00 363 aa9.69□□□□□ -0.86
SCFD1-220ENST00000556486 KCND1Q9NSA2 647 aa9.69□□□□□ -0.86
SCFD1-220ENST00000556486 IMP3Q9NV31 184 aaKnown RBP9.69□□□□□ -0.86
SCFD1-220ENST00000556486 SOHLH2Q9NX45 425 aa9.69□□□□□ -0.86
SCFD1-220ENST00000556486 POMT2Q9UKY4 750 aa9.69□□□□□ -0.86
SCFD1-220ENST00000556486 ALG6Q9Y672 507 aa9.69□□□□□ -0.86
SCFD1-220ENST00000556486 CFAP20Q9Y6A4 193 aaKnown RBP9.69□□□□□ -0.86
SCFD1-220ENST00000556486 CCDC168Q8NDH2 2452 aa9.68□□□□□ -0.86
SCFD1-220ENST00000556486 ZGRF1Q86YA3 2104 aa9.68□□□□□ -0.86
SCFD1-220ENST00000556486 IGLV3-16A0A075B6K0 115 aa9.68□□□□□ -0.86
SCFD1-220ENST00000556486 C2orf81A6NN90 581 aa9.68□□□□□ -0.86
SCFD1-220ENST00000556486 LINC01387J3KSC0 135 aa9.68□□□□□ -0.86
SCFD1-220ENST00000556486 APOC4-APOC2K7ER74 178 aa9.68□□□□□ -0.86
SCFD1-220ENST00000556486 STX7O15400 261 aaKnown RBP9.68□□□□□ -0.86
SCFD1-220ENST00000556486 TPD52L2O43399 206 aaKnown RBP9.68□□□□□ -0.86
SCFD1-220ENST00000556486 LDB2O43679 373 aa9.68□□□□□ -0.86
SCFD1-220ENST00000556486 ANXA9O76027 345 aa9.68□□□□□ -0.86
SCFD1-220ENST00000556486 SRP72O76094 671 aaKnown RBP9.68□□□□□ -0.86
SCFD1-220ENST00000556486 ZRANB2O95218 330 aaKnown RBP eCLIP9.68□□□□□ -0.86
SCFD1-220ENST00000556486 APOC2P02655 101 aa9.68□□□□□ -0.86
SCFD1-220ENST00000556486 CAPN1P07384 714 aa9.68□□□□□ -0.86
SCFD1-220ENST00000556486 TPM1P09493 284 aa9.68□□□□□ -0.86
SCFD1-220ENST00000556486 SLC35G4P0C7Q5 338 aa9.68□□□□□ -0.86
SCFD1-220ENST00000556486 MSH3P20585 1137 aa9.68□□□□□ -0.86
SCFD1-220ENST00000556486 CCNFP41002 786 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms