RNA–Protein interactions for RNA: ENST00000556399.5

ARHGEF40-207, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 4,902 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-207ENST00000556399 NOS3P29474 1203 aa14.71□□□□□ -0.06
ARHGEF40-207ENST00000556399 CREB5Q02930 508 aa14.71□□□□□ -0.06
ARHGEF40-207ENST00000556399 RELAQ04206 551 aa14.71□□□□□ -0.06
ARHGEF40-207ENST00000556399 SMARCB1Q12824 385 aa14.71□□□□□ -0.06
ARHGEF40-207ENST00000556399 KLHL12Q53G59 568 aa14.71□□□□□ -0.06
ARHGEF40-207ENST00000556399 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP14.71□□□□□ -0.06
ARHGEF40-207ENST00000556399 SLC24A5Q71RS6 500 aa14.71□□□□□ -0.06
ARHGEF40-207ENST00000556399 ADGRG5Q8IZF4 528 aa14.71□□□□□ -0.06
ARHGEF40-207ENST00000556399 SP140LQ9H930 580 aa14.71□□□□□ -0.06
ARHGEF40-207ENST00000556399 SDR39U1Q9NRG7 319 aaPredicted RBP14.71□□□□□ -0.06
ARHGEF40-207ENST00000556399 RUVBL1Q9Y265 456 aaKnown RBP14.71□□□□□ -0.06
ARHGEF40-207ENST00000556399 MANSC4A6NHS7 340 aaPredicted RBP14.7□□□□□ -0.06
ARHGEF40-207ENST00000556399 ZW10O43264 779 aa14.7□□□□□ -0.06
ARHGEF40-207ENST00000556399 SLC28A2O43868 658 aa14.7□□□□□ -0.06
ARHGEF40-207ENST00000556399 DNAJB5O75953 348 aa14.7□□□□□ -0.06
ARHGEF40-207ENST00000556399 SMIM18P0DKX4 95 aa14.7□□□□□ -0.06
ARHGEF40-207ENST00000556399 ANXA8P13928 327 aa14.7□□□□□ -0.06
ARHGEF40-207ENST00000556399 GRIA2P42262 883 aa14.7□□□□□ -0.06
ARHGEF40-207ENST00000556399 CASP9P55211 416 aa14.7□□□□□ -0.06
ARHGEF40-207ENST00000556399 C2orf80Q0P641 193 aa14.7□□□□□ -0.06
ARHGEF40-207ENST00000556399 SERINC3Q13530 473 aa14.7□□□□□ -0.06
ARHGEF40-207ENST00000556399 SNX20Q7Z614 316 aa14.7□□□□□ -0.06
ARHGEF40-207ENST00000556399 UBE2J2Q8N2K1 259 aa14.7□□□□□ -0.06
ARHGEF40-207ENST00000556399 TEX47Q8TBZ9 253 aa14.7□□□□□ -0.06
ARHGEF40-207ENST00000556399 HECAQ9UBI9 543 aaPredicted RBP14.7□□□□□ -0.06
ARHGEF40-207ENST00000556399 CFL2Q9Y281 166 aa14.7□□□□□ -0.06
ARHGEF40-207ENST00000556399 MRPS7Q9Y2R9 242 aaKnown RBP14.7□□□□□ -0.06
ARHGEF40-207ENST00000556399 RNF11Q9Y3C5 154 aa14.7□□□□□ -0.06
ARHGEF40-207ENST00000556399 ANKRD66B4E2M5 251 aa14.7□□□□□ -0.06
ARHGEF40-207ENST00000556399 UGT2B17O75795 530 aa14.7□□□□□ -0.06
ARHGEF40-207ENST00000556399 GLUD1P00367 558 aa14.7□□□□□ -0.06
ARHGEF40-207ENST00000556399 PTX3P26022 381 aaPredicted RBP14.7□□□□□ -0.06
ARHGEF40-207ENST00000556399 NTSP30990 170 aa14.7□□□□□ -0.06
ARHGEF40-207ENST00000556399 CCT3P49368 545 aaKnown RBP14.7□□□□□ -0.06
ARHGEF40-207ENST00000556399 INHBCP55103 352 aa14.7□□□□□ -0.06
ARHGEF40-207ENST00000556399 MANFP55145 182 aaKnown RBP14.7□□□□□ -0.06
ARHGEF40-207ENST00000556399 KIAA1614Q5VZ46 1190 aa14.7□□□□□ -0.06
ARHGEF40-207ENST00000556399 SH2D5Q6ZV89 423 aa14.7□□□□□ -0.06
ARHGEF40-207ENST00000556399 SIX5Q8N196 739 aa14.7□□□□□ -0.06
ARHGEF40-207ENST00000556399 MFSD2AQ8NA29 543 aa14.7□□□□□ -0.06
ARHGEF40-207ENST00000556399 HERC2P3Q9BVR0 1158 aa14.7□□□□□ -0.06
ARHGEF40-207ENST00000556399 WDR6Q9NNW5 1121 aaKnown RBP14.7□□□□□ -0.06
ARHGEF40-207ENST00000556399 MRPL17Q9NRX2 175 aaKnown RBP14.7□□□□□ -0.06
ARHGEF40-207ENST00000556399 ZNF222Q9UK12 451 aa14.7□□□□□ -0.06
ARHGEF40-207ENST00000556399 RNF6Q9Y252 685 aa14.7□□□□□ -0.06
ARHGEF40-207ENST00000556399 GADD45GO95257 159 aa14.7□□□□□ -0.06
ARHGEF40-207ENST00000556399 ATE1O95260 518 aa14.7□□□□□ -0.06
ARHGEF40-207ENST00000556399 EPOP01588 193 aa14.7□□□□□ -0.06
ARHGEF40-207ENST00000556399 ALPIP09923 528 aa14.7□□□□□ -0.06
ARHGEF40-207ENST00000556399 NSG1P42857 185 aa14.7□□□□□ -0.06
ARHGEF40-207ENST00000556399 LYSMD3Q7Z3D4 306 aa14.7□□□□□ -0.06
ARHGEF40-207ENST00000556399 LRRC17Q8N6Y2 441 aa14.7□□□□□ -0.06
ARHGEF40-207ENST00000556399 SUSD3Q96L08 255 aa14.7□□□□□ -0.06
ARHGEF40-207ENST00000556399 SPATA5L1Q9BVQ7 753 aa14.7□□□□□ -0.06
ARHGEF40-207ENST00000556399 THUMPD1Q9NXG2 353 aaKnown RBP14.7□□□□□ -0.06
ARHGEF40-207ENST00000556399 GULP1Q9UBP9 304 aa14.7□□□□□ -0.06
ARHGEF40-207ENST00000556399 SCML2Q9UQR0 700 aa14.7□□□□□ -0.06
ARHGEF40-207ENST00000556399 TMED5Q9Y3A6 229 aa14.7□□□□□ -0.06
ARHGEF40-207ENST00000556399 RBM47A0AV96 593 aaKnown RBP14.7□□□□□ -0.06
ARHGEF40-207ENST00000556399 FZD9O00144 591 aa14.7□□□□□ -0.06
ARHGEF40-207ENST00000556399 OR1I1O60431 355 aa14.7□□□□□ -0.06
ARHGEF40-207ENST00000556399 PRAMEF11O60813 436 aa14.7□□□□□ -0.06
ARHGEF40-207ENST00000556399 SNX4O95219 450 aa14.7□□□□□ -0.06
ARHGEF40-207ENST00000556399 BLVRAP53004 296 aa14.7□□□□□ -0.06
ARHGEF40-207ENST00000556399 IST1P53990 364 aa14.7□□□□□ -0.06
ARHGEF40-207ENST00000556399 FOXA1P55317 472 aa14.7□□□□□ -0.06
ARHGEF40-207ENST00000556399 USP41Q3LFD5 358 aa14.7□□□□□ -0.06
ARHGEF40-207ENST00000556399 PKDCCQ504Y2 493 aa14.7□□□□□ -0.06
ARHGEF40-207ENST00000556399 FGD2Q7Z6J4 655 aa14.7□□□□□ -0.06
ARHGEF40-207ENST00000556399 ZNF467Q7Z7K2 595 aaPredicted RBP14.7□□□□□ -0.06
ARHGEF40-207ENST00000556399 ZFAND4Q86XD8 727 aa14.7□□□□□ -0.06
ARHGEF40-207ENST00000556399 CLDN19Q8N6F1 224 aa14.7□□□□□ -0.06
ARHGEF40-207ENST00000556399 PTERQ96BW5 349 aa14.7□□□□□ -0.06
ARHGEF40-207ENST00000556399 TM9SF3Q9HD45 589 aa14.7□□□□□ -0.06
ARHGEF40-207ENST00000556399 DKK3Q9UBP4 350 aa14.7□□□□□ -0.06
ARHGEF40-207ENST00000556399 SYN3O14994 580 aa14.69□□□□□ -0.06
ARHGEF40-207ENST00000556399 ACOX3O15254 700 aa14.69□□□□□ -0.06
ARHGEF40-207ENST00000556399 BMXP51813 675 aa14.69□□□□□ -0.06
ARHGEF40-207ENST00000556399 PHC1P78364 1004 aa14.69□□□□□ -0.06
ARHGEF40-207ENST00000556399 CYP4F8P98187 520 aa14.69□□□□□ -0.06
ARHGEF40-207ENST00000556399 DSC3Q14574 896 aa14.69□□□□□ -0.06
ARHGEF40-207ENST00000556399 ZNF792Q3KQV3 632 aa14.69□□□□□ -0.06
ARHGEF40-207ENST00000556399 PAGE3Q5JUK9 113 aa14.69□□□□□ -0.06
ARHGEF40-207ENST00000556399 LARP4Q71RC2 724 aaKnown RBP eCLIP14.69□□□□□ -0.065e-6■■□□□ 12.4
ARHGEF40-207ENST00000556399 RAVER1Q8IY67 606 aaKnown RBP14.69□□□□□ -0.06
ARHGEF40-207ENST00000556399 LSMEM2Q8N112 164 aa14.69□□□□□ -0.06
ARHGEF40-207ENST00000556399 UMODL1-AS1Q8N2C9 162 aa14.69□□□□□ -0.06
ARHGEF40-207ENST00000556399 ABHD11Q8NFV4 315 aa14.69□□□□□ -0.06
ARHGEF40-207ENST00000556399 BTN2A2Q8WVV5 523 aa14.69□□□□□ -0.06
ARHGEF40-207ENST00000556399 KCNJ9Q92806 393 aa14.69□□□□□ -0.06
ARHGEF40-207ENST00000556399 TMEM125Q96AQ2 219 aa14.69□□□□□ -0.06
ARHGEF40-207ENST00000556399 HSH2DQ96JZ2 352 aa14.69□□□□□ -0.06
ARHGEF40-207ENST00000556399 CCSER2Q9H7U1 834 aa14.69□□□□□ -0.06
ARHGEF40-207ENST00000556399 RAD18Q9NS91 495 aa14.69□□□□□ -0.06
ARHGEF40-207ENST00000556399 F2P00734 622 aa14.69□□□□□ -0.06
ARHGEF40-207ENST00000556399 C8GP07360 202 aa14.69□□□□□ -0.06
ARHGEF40-207ENST00000556399 ZNF26P17031 533 aaPredicted RBP14.69□□□□□ -0.06
ARHGEF40-207ENST00000556399 POLR2EP19388 210 aaKnown RBP14.69□□□□□ -0.06
ARHGEF40-207ENST00000556399 BUD31P41223 144 aaPredicted RBP14.69□□□□□ -0.06
ARHGEF40-207ENST00000556399 KCNQ1P51787 676 aa14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms