RNA–Protein interactions for RNA: ENST00000555806.5

NEDD1-208, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 4

Gene NEDD1, Length 565 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-208ENST00000555806 LCN10Q6JVE6 187 aa17.75■□□□□ 0.43
NEDD1-208ENST00000555806 CENPUQ71F23 418 aa17.75■□□□□ 0.43
NEDD1-208ENST00000555806 PTRH1Q86Y79 214 aaKnown RBP17.75■□□□□ 0.43
NEDD1-208ENST00000555806 PPIL6Q8IXY8 311 aa17.75■□□□□ 0.43
NEDD1-208ENST00000555806 ENDOVQ8N8Q3 282 aaKnown RBP17.75■□□□□ 0.43
NEDD1-208ENST00000555806 NAT8LQ8N9F0 302 aa17.75■□□□□ 0.43
NEDD1-208ENST00000555806 OR2L8Q8NGY9 312 aa17.75■□□□□ 0.43
NEDD1-208ENST00000555806 RAD51AP1Q96B01 352 aa17.75■□□□□ 0.43
NEDD1-208ENST00000555806 SLC22A18Q96BI1 424 aa17.75■□□□□ 0.43
NEDD1-208ENST00000555806 MENTQ9BUN1 341 aa17.75■□□□□ 0.43
NEDD1-208ENST00000555806 DDX47Q9H0S4 455 aaKnown RBP17.75■□□□□ 0.43
NEDD1-208ENST00000555806 INTS10Q9NVR2 710 aaKnown RBP17.75■□□□□ 0.43
NEDD1-208ENST00000555806 SNX7Q9UNH6 387 aa17.75■□□□□ 0.43
NEDD1-208ENST00000555806 USP27XA6NNY8 438 aa17.74■□□□□ 0.43
NEDD1-208ENST00000555806 C1orf105O95561 183 aa17.74■□□□□ 0.43
NEDD1-208ENST00000555806 S1PR4O95977 384 aa17.74■□□□□ 0.43
NEDD1-208ENST00000555806 F7P08709 466 aaPredicted RBP17.74■□□□□ 0.43
NEDD1-208ENST00000555806 ATXN8OSP0DMR3 200 aa17.74■□□□□ 0.43
NEDD1-208ENST00000555806 PKMP14618 531 aaKnown RBP17.74■□□□□ 0.43
NEDD1-208ENST00000555806 MAGP20916 626 aa17.74■□□□□ 0.43
NEDD1-208ENST00000555806 CCNFP41002 786 aa17.74■□□□□ 0.43
NEDD1-208ENST00000555806 MAGEA3P43357 314 aa17.74■□□□□ 0.43
NEDD1-208ENST00000555806 ADARP55265 1226 aaKnown RBP17.74■□□□□ 0.43
NEDD1-208ENST00000555806 IZUMO3Q5VZ72 239 aa17.74■□□□□ 0.43
NEDD1-208ENST00000555806 ZNF517Q6ZMY9 492 aaPredicted RBP17.74■□□□□ 0.43
NEDD1-208ENST00000555806 ZBTB2Q8N680 514 aa17.74■□□□□ 0.43
NEDD1-208ENST00000555806 ABHD17AQ96GS6 310 aa17.74■□□□□ 0.43
NEDD1-208ENST00000555806 CAPZA3Q96KX2 299 aa17.74■□□□□ 0.43
NEDD1-208ENST00000555806 CHRNA10Q9GZZ6 450 aa17.74■□□□□ 0.43
NEDD1-208ENST00000555806 SPRTNQ9H040 489 aaPredicted RBP17.74■□□□□ 0.43
NEDD1-208ENST00000555806 CCDC68Q9H2F9 335 aa17.74■□□□□ 0.43
NEDD1-208ENST00000555806 ZNF71Q9NQZ8 489 aaPredicted RBP17.74■□□□□ 0.43
NEDD1-208ENST00000555806 FBXO6Q9NRD1 293 aaPredicted RBP17.74■□□□□ 0.43
NEDD1-208ENST00000555806 C20orf96Q9NUD7 363 aaPredicted RBP17.74■□□□□ 0.43
NEDD1-208ENST00000555806 INTS7Q9NVH2 962 aaKnown RBP17.74■□□□□ 0.43
NEDD1-208ENST00000555806 KLHL20Q9Y2M5 609 aa17.74■□□□□ 0.43
NEDD1-208ENST00000555806 AP1M2Q9Y6Q5 423 aa17.74■□□□□ 0.43
NEDD1-208ENST00000555806 SPTBP11277 2137 aa17.74■□□□□ 0.43
NEDD1-208ENST00000555806 ZCWPW2A0A1B0GU75 182 aa17.73■□□□□ 0.43
NEDD1-208ENST00000555806 C9J4A7 227 aa17.73■□□□□ 0.43
NEDD1-208ENST00000555806 PYCARD-AS1I3L0S3 204 aa17.73■□□□□ 0.43
NEDD1-208ENST00000555806 HCRTR1O43613 425 aa17.73■□□□□ 0.43
NEDD1-208ENST00000555806 RFPL1O75677 317 aa17.73■□□□□ 0.43
NEDD1-208ENST00000555806 USP1O94782 785 aa17.73■□□□□ 0.43
NEDD1-208ENST00000555806 RAB40ALP0C0E4 278 aa17.73■□□□□ 0.43
NEDD1-208ENST00000555806 AGXTP21549 392 aa17.73■□□□□ 0.43
NEDD1-208ENST00000555806 GABRA4P48169 554 aa17.73■□□□□ 0.43
NEDD1-208ENST00000555806 GNG11P61952 73 aa17.73■□□□□ 0.43
NEDD1-208ENST00000555806 CTBP1Q13363 440 aa17.73■□□□□ 0.43
NEDD1-208ENST00000555806 IL10RAQ13651 578 aa17.73■□□□□ 0.43
NEDD1-208ENST00000555806 SF1Q15637 639 aaKnown RBP17.73■□□□□ 0.43
NEDD1-208ENST00000555806 UGT8Q16880 541 aa17.73■□□□□ 0.43
NEDD1-208ENST00000555806 CCSMST1Q4G0I0 132 aa17.73■□□□□ 0.43
NEDD1-208ENST00000555806 RNASEH2BQ5TBB1 312 aaKnown RBP17.73■□□□□ 0.43
NEDD1-208ENST00000555806 FAM198BQ6UWH4 519 aa17.73■□□□□ 0.43
NEDD1-208ENST00000555806 DENND6AQ8IWF6 608 aa17.73■□□□□ 0.43
NEDD1-208ENST00000555806 ZNF655Q8N720 491 aaPredicted RBP17.73■□□□□ 0.43
NEDD1-208ENST00000555806 MAGEC3Q8TD91 643 aa17.73■□□□□ 0.43
NEDD1-208ENST00000555806 NLNQ9BYT8 704 aa17.73■□□□□ 0.43
NEDD1-208ENST00000555806 PLCL2Q9UPR0 1127 aa17.73■□□□□ 0.43
NEDD1-208ENST00000555806 BOD1L1Q8NFC6 3051 aa17.72■□□□□ 0.43
NEDD1-208ENST00000555806 KRT87PA6NCN2 255 aa17.72■□□□□ 0.43
NEDD1-208ENST00000555806 MKRN2OSH3BPM6 223 aa17.72■□□□□ 0.43
NEDD1-208ENST00000555806 DNALI1O14645 258 aaPredicted RBP17.72■□□□□ 0.43
NEDD1-208ENST00000555806 ZSCAN9O15535 394 aaPredicted RBP17.72■□□□□ 0.43
NEDD1-208ENST00000555806 ATP5DP30049 168 aa17.72■□□□□ 0.43
NEDD1-208ENST00000555806 PMS2P54278 862 aa17.72■□□□□ 0.43
NEDD1-208ENST00000555806 LONRF1Q17RB8 773 aa17.72■□□□□ 0.43
NEDD1-208ENST00000555806 LACTB2Q53H82 288 aaPredicted RBP17.72■□□□□ 0.43
NEDD1-208ENST00000555806 ACSBG2Q5FVE4 666 aa17.72■□□□□ 0.43
NEDD1-208ENST00000555806 C1orf189Q5VU69 101 aa17.72■□□□□ 0.43
NEDD1-208ENST00000555806 ATG14Q6ZNE5 492 aa17.72■□□□□ 0.43
NEDD1-208ENST00000555806 AGGF1Q8N302 714 aaeCLIP17.72■□□□□ 0.43
NEDD1-208ENST00000555806 DNAJC22Q8N4W6 341 aa17.72■□□□□ 0.43
NEDD1-208ENST00000555806 CALML6Q8TD86 181 aa17.72■□□□□ 0.43
NEDD1-208ENST00000555806 THAP4Q8WY91 577 aa17.72■□□□□ 0.43
NEDD1-208ENST00000555806 SIGLEC10Q96LC7 697 aa17.72■□□□□ 0.43
NEDD1-208ENST00000555806 DPH2Q9BQC3 489 aaPredicted RBP17.72■□□□□ 0.43
NEDD1-208ENST00000555806 TRIM4Q9C037 500 aa17.72■□□□□ 0.43
NEDD1-208ENST00000555806 TXLNGQ9NUQ3 528 aa17.72■□□□□ 0.43
NEDD1-208ENST00000555806 GALPQ9UBC7 116 aa17.72■□□□□ 0.43
NEDD1-208ENST00000555806 TLN1Q9Y490 2541 aaKnown RBP17.72■□□□□ 0.43
NEDD1-208ENST00000555806 SNRNP200O75643 2136 aaKnown RBP17.72■□□□□ 0.43
NEDD1-208ENST00000555806 CTSBP07858 339 aa17.71■□□□□ 0.43
NEDD1-208ENST00000555806 SLC1A2P43004 574 aa17.71■□□□□ 0.43
NEDD1-208ENST00000555806 PTK6Q13882 451 aa17.71■□□□□ 0.43
NEDD1-208ENST00000555806 GBX1Q14549 363 aa17.71■□□□□ 0.43
NEDD1-208ENST00000555806 NCF4Q15080 339 aa17.71■□□□□ 0.43
NEDD1-208ENST00000555806 KLHL38Q2WGJ6 581 aa17.71■□□□□ 0.43
NEDD1-208ENST00000555806 TTLL9Q3SXZ7 439 aa17.71■□□□□ 0.43
NEDD1-208ENST00000555806 FAM69BQ5VUD6 431 aa17.71■□□□□ 0.43
NEDD1-208ENST00000555806 TLDC1Q6P9B6 456 aa17.71■□□□□ 0.43
NEDD1-208ENST00000555806 SERBP1Q8NC51 408 aaKnown RBP eCLIP17.71■□□□□ 0.43
NEDD1-208ENST00000555806 EURLQ9NYK6 297 aa17.71■□□□□ 0.43
NEDD1-208ENST00000555806 SPATA7Q9P0W8 599 aa17.71■□□□□ 0.43
NEDD1-208ENST00000555806 TCFL5Q9UL49 500 aa17.71■□□□□ 0.43
NEDD1-208ENST00000555806 SRPK3Q9UPE1 567 aa17.71■□□□□ 0.43
NEDD1-208ENST00000555806 HELZ2Q9BYK8 2649 aaKnown RBP17.71■□□□□ 0.43
NEDD1-208ENST00000555806 SPTA1P02549 2419 aa17.7■□□□□ 0.42
NEDD1-208ENST00000555806 ARGFXA6NJG6 315 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms