RNA–Protein interactions for RNA: ENST00000555382.5

PRKCH-215, Transcript of protein kinase C eta, human

TSL 3

Gene PRKCH, Length 691 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRKCH-215	ENST00000555382	HEMK1	Q9Y5R4	338 aa	Predicted RBP	9.36	□□□□□ -0.91
PRKCH-215	ENST00000555382	COLEC10	Q9Y6Z7	277 aa		9.36	□□□□□ -0.91
PRKCH-215	ENST00000555382		A0A096LPK6	155 aa		9.35	□□□□□ -0.91
PRKCH-215	ENST00000555382	GOLGA6L10	A6NI86	522 aa		9.35	□□□□□ -0.91
PRKCH-215	ENST00000555382	IFRD1	O00458	451 aa	Predicted RBP	9.35	□□□□□ -0.91
PRKCH-215	ENST00000555382	NTN3	O00634	580 aa	Predicted RBP	9.35	□□□□□ -0.91
PRKCH-215	ENST00000555382	NUDT21	O43809	227 aa	Known RBP	9.35	□□□□□ -0.91
PRKCH-215	ENST00000555382	KDM1A	O60341	852 aa		9.35	□□□□□ -0.91
PRKCH-215	ENST00000555382	KLHL2	O95198	593 aa		9.35	□□□□□ -0.91
PRKCH-215	ENST00000555382	MT-ND3	P03897	115 aa		9.35	□□□□□ -0.91
PRKCH-215	ENST00000555382	LTA4H	P09960	611 aa	Known RBP	9.35	□□□□□ -0.91
PRKCH-215	ENST00000555382	MYZAP	P0CAP1	466 aa		9.35	□□□□□ -0.91
PRKCH-215	ENST00000555382	MTHFD1	P11586	935 aa	Known RBP	9.35	□□□□□ -0.91
PRKCH-215	ENST00000555382	BRAF	P15056	766 aa		9.35	□□□□□ -0.91
PRKCH-215	ENST00000555382	AK4	P27144	223 aa	Predicted RBP	9.35	□□□□□ -0.91
PRKCH-215	ENST00000555382	RBMS1	P29558	406 aa	Known RBP	9.35	□□□□□ -0.91
PRKCH-215	ENST00000555382	FBN2	P35556	2912 aa		9.35	□□□□□ -0.91
PRKCH-215	ENST00000555382	RPIA	P49247	311 aa		9.35	□□□□□ -0.91
PRKCH-215	ENST00000555382	SLC18A1	P54219	525 aa		9.35	□□□□□ -0.91
PRKCH-215	ENST00000555382	UBE2I	P63279	158 aa	Known RBP	9.35	□□□□□ -0.91
PRKCH-215	ENST00000555382	CDKL1	Q00532	357 aa		9.35	□□□□□ -0.91
PRKCH-215	ENST00000555382	TLE1	Q04724	770 aa		9.35	□□□□□ -0.91
PRKCH-215	ENST00000555382	HSPA14	Q0VDF9	509 aa		9.35	□□□□□ -0.91
PRKCH-215	ENST00000555382	SQSTM1	Q13501	440 aa		9.35	□□□□□ -0.91
PRKCH-215	ENST00000555382	BOP1	Q14137	746 aa	Known RBP	9.35	□□□□□ -0.91
PRKCH-215	ENST00000555382	UBAP2L	Q14157	1087 aa	Known RBP	9.35	□□□□□ -0.91
PRKCH-215	ENST00000555382	ARHGAP19	Q14CB8	494 aa		9.35	□□□□□ -0.91
PRKCH-215	ENST00000555382	ACAP2	Q15057	778 aa		9.35	□□□□□ -0.91
PRKCH-215	ENST00000555382	FAM83E	Q2M2I3	478 aa		9.35	□□□□□ -0.91
PRKCH-215	ENST00000555382	KRT71	Q3SY84	523 aa		9.35	□□□□□ -0.91
PRKCH-215	ENST00000555382	ZNF542P	Q5EBM4	170 aa		9.35	□□□□□ -0.91
PRKCH-215	ENST00000555382	ACSBG2	Q5FVE4	666 aa		9.35	□□□□□ -0.91
PRKCH-215	ENST00000555382	CEP85L	Q5SZL2	805 aa		9.35	□□□□□ -0.91
PRKCH-215	ENST00000555382	METTL2B	Q6P1Q9	378 aa	Known RBP	9.35	□□□□□ -0.91
PRKCH-215	ENST00000555382	SLC30A9	Q6PML9	568 aa		9.35	□□□□□ -0.91
PRKCH-215	ENST00000555382	TMEM207	Q6UWW9	146 aa		9.35	□□□□□ -0.91
PRKCH-215	ENST00000555382	RBM44	Q6ZP01	1051 aa	Known RBP	9.35	□□□□□ -0.91
PRKCH-215	ENST00000555382	TBC1D1	Q86TI0	1168 aa	Predicted RBP	9.35	□□□□□ -0.91
PRKCH-215	ENST00000555382	TRABD2A	Q86V40	505 aa		9.35	□□□□□ -0.91
PRKCH-215	ENST00000555382	NAGS	Q8N159	534 aa		9.35	□□□□□ -0.91
PRKCH-215	ENST00000555382	ARL10	Q8N8L6	244 aa		9.35	□□□□□ -0.91
PRKCH-215	ENST00000555382	SIDT2	Q8NBJ9	832 aa	Known RBP	9.35	□□□□□ -0.91
PRKCH-215	ENST00000555382	FAM46D	Q8NEK8	389 aa		9.35	□□□□□ -0.91
PRKCH-215	ENST00000555382	ACVR1C	Q8NER5	493 aa		9.35	□□□□□ -0.91
PRKCH-215	ENST00000555382	OR2W6P	Q8NHA6	318 aa		9.35	□□□□□ -0.91
PRKCH-215	ENST00000555382	OR5K2	Q8NHB8	316 aa		9.35	□□□□□ -0.91
PRKCH-215	ENST00000555382	CCL4L1	Q8NHW4	92 aa		9.35	□□□□□ -0.91
PRKCH-215	ENST00000555382	EEF1AKMT1	Q8WVE0	214 aa		9.35	□□□□□ -0.91
PRKCH-215	ENST00000555382	TFG	Q92734	400 aa	Predicted RBP	9.35	□□□□□ -0.91
PRKCH-215	ENST00000555382	KIAA1191	Q96A73	305 aa		9.35	□□□□□ -0.91
PRKCH-215	ENST00000555382	SH3KBP1	Q96B97	665 aa		9.35	□□□□□ -0.91
PRKCH-215	ENST00000555382	LIN37	Q96GY3	246 aa	Predicted RBP	9.35	□□□□□ -0.91
PRKCH-215	ENST00000555382	SLC30A3	Q99726	388 aa		9.35	□□□□□ -0.91
PRKCH-215	ENST00000555382	SH3GL2	Q99962	352 aa		9.35	□□□□□ -0.91
PRKCH-215	ENST00000555382	SLC12A9	Q9BXP2	914 aa		9.35	□□□□□ -0.91
PRKCH-215	ENST00000555382	ACBD3	Q9H3P7	528 aa		9.35	□□□□□ -0.91
PRKCH-215	ENST00000555382	EPB41L1	Q9H4G0	881 aa		9.35	□□□□□ -0.91
PRKCH-215	ENST00000555382	RDH14	Q9HBH5	336 aa		9.35	□□□□□ -0.91
PRKCH-215	ENST00000555382	NMRAL1	Q9HBL8	299 aa		9.35	□□□□□ -0.91
PRKCH-215	ENST00000555382	GALP	Q9UBC7	116 aa		9.35	□□□□□ -0.91
PRKCH-215	ENST00000555382	DCDC2	Q9UHG0	476 aa		9.35	□□□□□ -0.91
PRKCH-215	ENST00000555382	TLK1	Q9UKI8	766 aa		9.35	□□□□□ -0.91
PRKCH-215	ENST00000555382	DOLK	Q9UPQ8	538 aa		9.35	□□□□□ -0.91
PRKCH-215	ENST00000555382	AGPS	O00116	658 aa		9.34	□□□□□ -0.91
PRKCH-215	ENST00000555382	RGS16	O15492	202 aa	Predicted RBP	9.34	□□□□□ -0.91
PRKCH-215	ENST00000555382	ZW10	O43264	779 aa		9.34	□□□□□ -0.91
PRKCH-215	ENST00000555382	TNFSF15	O95150	251 aa		9.34	□□□□□ -0.91
PRKCH-215	ENST00000555382	CAT	P04040	527 aa	Known RBP	9.34	□□□□□ -0.91
PRKCH-215	ENST00000555382	GLB1	P16278	677 aa		9.34	□□□□□ -0.91
PRKCH-215	ENST00000555382	PDHA2	P29803	388 aa		9.34	□□□□□ -0.91
PRKCH-215	ENST00000555382	HSD17B2	P37059	387 aa		9.34	□□□□□ -0.91
PRKCH-215	ENST00000555382	GPR3	P46089	330 aa		9.34	□□□□□ -0.91
PRKCH-215	ENST00000555382	KPNA2	P52292	529 aa	Known RBP	9.34	□□□□□ -0.91
PRKCH-215	ENST00000555382	AP1S2	P56377	157 aa		9.34	□□□□□ -0.91
PRKCH-215	ENST00000555382	CLCA4	Q14CN2	919 aa		9.34	□□□□□ -0.91
PRKCH-215	ENST00000555382	TGIF1	Q15583	401 aa		9.34	□□□□□ -0.91
PRKCH-215	ENST00000555382	RPE65	Q16518	533 aa		9.34	□□□□□ -0.91
PRKCH-215	ENST00000555382	CLPP	Q16740	277 aa	Predicted RBP	9.34	□□□□□ -0.91
PRKCH-215	ENST00000555382	C14orf28	Q4W4Y0	310 aa		9.34	□□□□□ -0.91
PRKCH-215	ENST00000555382	CHCHD2P9	Q5T1J5	151 aa	Predicted RBP	9.34	□□□□□ -0.91
PRKCH-215	ENST00000555382	KLC3	Q6P597	504 aa		9.34	□□□□□ -0.91
PRKCH-215	ENST00000555382	TTC23L	Q6PF05	361 aa		9.34	□□□□□ -0.91
PRKCH-215	ENST00000555382	EFL1	Q7Z2Z2	1120 aa	Known RBP	9.34	□□□□□ -0.91
PRKCH-215	ENST00000555382	B3GNT8	Q7Z7M8	397 aa		9.34	□□□□□ -0.91
PRKCH-215	ENST00000555382	ADAMTSL2	Q86TH1	951 aa		9.34	□□□□□ -0.91
PRKCH-215	ENST00000555382	SLC9B2	Q86UD5	537 aa		9.34	□□□□□ -0.91
PRKCH-215	ENST00000555382	PIM3	Q86V86	326 aa		9.34	□□□□□ -0.91
PRKCH-215	ENST00000555382	VRK3	Q8IV63	474 aa		9.34	□□□□□ -0.91
PRKCH-215	ENST00000555382	DCUN1D3	Q8IWE4	304 aa		9.34	□□□□□ -0.91
PRKCH-215	ENST00000555382	CPNE9	Q8IYJ1	553 aa		9.34	□□□□□ -0.91
PRKCH-215	ENST00000555382	CENPL	Q8N0S6	344 aa	Predicted RBP	9.34	□□□□□ -0.91
PRKCH-215	ENST00000555382	CYP4X1	Q8N118	509 aa		9.34	□□□□□ -0.91
PRKCH-215	ENST00000555382	MYO1H	Q8N1T3	1032 aa		9.34	□□□□□ -0.91
PRKCH-215	ENST00000555382	WDR36	Q8NI36	951 aa	Known RBP	9.34	□□□□□ -0.91
PRKCH-215	ENST00000555382	HMGCLL1	Q8TB92	370 aa		9.34	□□□□□ -0.91
PRKCH-215	ENST00000555382	ZDHHC1	Q8WTX9	485 aa		9.34	□□□□□ -0.91
PRKCH-215	ENST00000555382	NAT6	Q93015	286 aa		9.34	□□□□□ -0.91
PRKCH-215	ENST00000555382	RMDN2	Q96LZ7	410 aa		9.34	□□□□□ -0.91
PRKCH-215	ENST00000555382	GPR78	Q96P69	363 aa		9.34	□□□□□ -0.91
PRKCH-215	ENST00000555382	RUFY1	Q96T51	708 aa		9.34	□□□□□ -0.91

Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms