RNA–Protein interactions for RNA: ENST00000555323.1

SYNE2-219, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 3

Gene SYNE2, Length 389 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-219ENST00000555323 E7ENX8 843 aa12.28□□□□□ -0.44
SYNE2-219ENST00000555323 CASC3O15234 703 aaKnown RBP12.28□□□□□ -0.44
SYNE2-219ENST00000555323 KLK8O60259 260 aa12.28□□□□□ -0.44
SYNE2-219ENST00000555323 KERAO60938 352 aa12.28□□□□□ -0.44
SYNE2-219ENST00000555323 MTHFD2P13995 350 aa12.28□□□□□ -0.44
SYNE2-219ENST00000555323 TYRP1P17643 537 aa12.28□□□□□ -0.44
SYNE2-219ENST00000555323 KRT4P19013 534 aa12.28□□□□□ -0.44
SYNE2-219ENST00000555323 IMPA1P29218 277 aa12.28□□□□□ -0.44
SYNE2-219ENST00000555323 CRHR1P34998 444 aa12.28□□□□□ -0.44
SYNE2-219ENST00000555323 CAPZBP47756 277 aa12.28□□□□□ -0.44
SYNE2-219ENST00000555323 CCT5P48643 541 aa12.28□□□□□ -0.44
SYNE2-219ENST00000555323 HNMTP50135 292 aa12.28□□□□□ -0.44
SYNE2-219ENST00000555323 INSM1Q01101 510 aaPredicted RBP12.28□□□□□ -0.44
SYNE2-219ENST00000555323 TAP2Q03519 686 aa12.28□□□□□ -0.44
SYNE2-219ENST00000555323 ZFP36L1Q07352 338 aaKnown RBP12.28□□□□□ -0.44
SYNE2-219ENST00000555323 KIR2DS3Q14952 304 aa12.28□□□□□ -0.44
SYNE2-219ENST00000555323 TECRLQ5HYJ1 363 aa12.28□□□□□ -0.44
SYNE2-219ENST00000555323 ZNF574Q6ZN55 896 aaPredicted RBP12.28□□□□□ -0.44
SYNE2-219ENST00000555323 USP53Q70EK8 1073 aa12.28□□□□□ -0.44
SYNE2-219ENST00000555323 OOSP2Q86WS3 158 aa12.28□□□□□ -0.44
SYNE2-219ENST00000555323 GPSM1Q86YR5 675 aa12.28□□□□□ -0.44
SYNE2-219ENST00000555323 PLXDC1Q8IUK5 500 aa12.28□□□□□ -0.44
SYNE2-219ENST00000555323 OR4D9Q8NGE8 314 aa12.28□□□□□ -0.44
SYNE2-219ENST00000555323 FLVCR1-AS1Q8TAF5 88 aa12.28□□□□□ -0.44
SYNE2-219ENST00000555323 ATL1Q8WXF7 558 aa12.28□□□□□ -0.44
SYNE2-219ENST00000555323 JPH3Q8WXH2 748 aaPredicted RBP12.28□□□□□ -0.44
SYNE2-219ENST00000555323 ADAMTS14Q8WXS8 1223 aa12.28□□□□□ -0.44
SYNE2-219ENST00000555323 RSC1A1Q92681 617 aa12.28□□□□□ -0.44
SYNE2-219ENST00000555323 SLC22A18Q96BI1 424 aa12.28□□□□□ -0.44
SYNE2-219ENST00000555323 ALKBH8Q96BT7 664 aaKnown RBP12.28□□□□□ -0.44
SYNE2-219ENST00000555323 FBXL8Q96CD0 374 aa12.28□□□□□ -0.44
SYNE2-219ENST00000555323 MRPL57Q9BQC6 102 aaKnown RBP12.28□□□□□ -0.44
SYNE2-219ENST00000555323 UNKQ9C0B0 810 aaKnown RBP12.28□□□□□ -0.44
SYNE2-219ENST00000555323 XKR8Q9H6D3 395 aa12.28□□□□□ -0.44
SYNE2-219ENST00000555323 ALG9Q9H6U8 611 aa12.28□□□□□ -0.44
SYNE2-219ENST00000555323 PCMTD2Q9NV79 361 aa12.28□□□□□ -0.44
SYNE2-219ENST00000555323 ZNF358Q9NW07 568 aa12.28□□□□□ -0.44
SYNE2-219ENST00000555323 MKS1Q9NXB0 559 aa12.28□□□□□ -0.44
SYNE2-219ENST00000555323 TMEM216Q9P0N5 145 aa12.28□□□□□ -0.44
SYNE2-219ENST00000555323 SENP1Q9P0U3 644 aa12.28□□□□□ -0.44
SYNE2-219ENST00000555323 STOX2Q9P2F5 926 aaPredicted RBP12.28□□□□□ -0.44
SYNE2-219ENST00000555323 PLAGL1Q9UM63 463 aa12.28□□□□□ -0.44
SYNE2-219ENST00000555323 CEP250Q9BV73 2442 aa12.28□□□□□ -0.44
SYNE2-219ENST00000555323 DMXL1Q9Y485 3027 aa12.27□□□□□ -0.44
SYNE2-219ENST00000555323 CFAP54Q96N23 3096 aa12.27□□□□□ -0.44
SYNE2-219ENST00000555323 A0A1W2PPV9 198 aa12.27□□□□□ -0.45
SYNE2-219ENST00000555323 PIPSLA2A3N6 862 aa12.27□□□□□ -0.45
SYNE2-219ENST00000555323 KRT87PA6NCN2 255 aa12.27□□□□□ -0.45
SYNE2-219ENST00000555323 GOLGA8RI6L899 631 aa12.27□□□□□ -0.45
SYNE2-219ENST00000555323 TOX3O15405 576 aaPredicted RBP12.27□□□□□ -0.45
SYNE2-219ENST00000555323 RGS16O15492 202 aaPredicted RBP12.27□□□□□ -0.45
SYNE2-219ENST00000555323 FKBP9O95302 570 aa12.27□□□□□ -0.45
SYNE2-219ENST00000555323 SYF2O95926 243 aaKnown RBP12.27□□□□□ -0.45
SYNE2-219ENST00000555323 TOP3BO95985 862 aaKnown RBP12.27□□□□□ -0.45
SYNE2-219ENST00000555323 ANXA5P08758 320 aa12.27□□□□□ -0.45
SYNE2-219ENST00000555323 CHRM5P08912 532 aaPredicted RBP12.27□□□□□ -0.45
SYNE2-219ENST00000555323 SBK3P0C264 359 aa12.27□□□□□ -0.45
SYNE2-219ENST00000555323 HOXB3P14651 431 aaPredicted RBP12.27□□□□□ -0.45
SYNE2-219ENST00000555323 CSF2RBP32927 897 aa12.27□□□□□ -0.45
SYNE2-219ENST00000555323 GGT5P36269 586 aa12.27□□□□□ -0.45
SYNE2-219ENST00000555323 KPNA2P52292 529 aaKnown RBP12.27□□□□□ -0.45
SYNE2-219ENST00000555323 PNLIPRP1P54315 467 aa12.27□□□□□ -0.45
SYNE2-219ENST00000555323 PRKAA1Q13131 559 aa12.27□□□□□ -0.45
SYNE2-219ENST00000555323 SPIDRQ14159 915 aa12.27□□□□□ -0.45
SYNE2-219ENST00000555323 FASTKQ14296 549 aaKnown RBP12.27□□□□□ -0.45
SYNE2-219ENST00000555323 AMZ1Q400G9 498 aa12.27□□□□□ -0.45
SYNE2-219ENST00000555323 SULT1C3Q6IMI6 304 aa12.27□□□□□ -0.45
SYNE2-219ENST00000555323 AGTRAPQ6RW13 159 aa12.27□□□□□ -0.45
SYNE2-219ENST00000555323 TMPRSS9Q7Z410 1059 aa12.27□□□□□ -0.45
SYNE2-219ENST00000555323 EXOC3L1Q86VI1 746 aa12.27□□□□□ -0.45
SYNE2-219ENST00000555323 KLHDC8AQ8IYD2 350 aa12.27□□□□□ -0.45
SYNE2-219ENST00000555323 CARFQ8N187 725 aa12.27□□□□□ -0.45
SYNE2-219ENST00000555323 TCAIMQ8N3R3 496 aa12.27□□□□□ -0.45
SYNE2-219ENST00000555323 BANPQ8N9N5 519 aa12.27□□□□□ -0.45
SYNE2-219ENST00000555323 PDPRQ8NCN5 879 aa12.27□□□□□ -0.45
SYNE2-219ENST00000555323 OR56A3Q8NH54 315 aa12.27□□□□□ -0.45
SYNE2-219ENST00000555323 SMPDL3AQ92484 453 aa12.27□□□□□ -0.45
SYNE2-219ENST00000555323 NCSTNQ92542 709 aa12.27□□□□□ -0.45
SYNE2-219ENST00000555323 RHBDF1Q96CC6 855 aa12.27□□□□□ -0.45
SYNE2-219ENST00000555323 GRAMD1AQ96CP6 724 aa12.27□□□□□ -0.45
SYNE2-219ENST00000555323 ZDHHC12Q96GR4 267 aa12.27□□□□□ -0.45
SYNE2-219ENST00000555323 TSNARE1Q96NA8 513 aa12.27□□□□□ -0.45
SYNE2-219ENST00000555323 IL17FQ96PD4 163 aa12.27□□□□□ -0.45
SYNE2-219ENST00000555323 OR2A14Q96R47 310 aa12.27□□□□□ -0.45
SYNE2-219ENST00000555323 GFM1Q96RP9 751 aaKnown RBP12.27□□□□□ -0.45
SYNE2-219ENST00000555323 CD180Q99467 661 aa12.27□□□□□ -0.45
SYNE2-219ENST00000555323 TMBIM4Q9HC24 238 aa12.27□□□□□ -0.45
SYNE2-219ENST00000555323 ARL15Q9NXU5 204 aa12.27□□□□□ -0.45
SYNE2-219ENST00000555323 CIDEBQ9UHD4 219 aa12.27□□□□□ -0.45
SYNE2-219ENST00000555323 PTBP2Q9UKA9 531 aaKnown RBP12.27□□□□□ -0.45
SYNE2-219ENST00000555323 GRID1Q9ULK0 1009 aa12.27□□□□□ -0.45
SYNE2-219ENST00000555323 RNF112Q9ULX5 631 aa12.27□□□□□ -0.45
SYNE2-219ENST00000555323 ACTL7BQ9Y614 415 aa12.27□□□□□ -0.45
SYNE2-219ENST00000555323 MN1Q10571 1320 aaPredicted RBP12.27□□□□□ -0.45
SYNE2-219ENST00000555323 SYCE1LA8MT33 242 aa12.26□□□□□ -0.45
SYNE2-219ENST00000555323 C2orf74A8MZ97 194 aa12.26□□□□□ -0.45
SYNE2-219ENST00000555323 D6RAR5 112 aa12.26□□□□□ -0.45
SYNE2-219ENST00000555323 CAPN5O15484 640 aaPredicted RBP12.26□□□□□ -0.45
SYNE2-219ENST00000555323 GLRA3O75311 464 aa12.26□□□□□ -0.45
SYNE2-219ENST00000555323 GUCA1CO95843 209 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms