RNA–Protein interactions for RNA: ENST00000555317.5

SRP54-206, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 644 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-206ENST00000555317 FBXO38Q6PIJ6 1188 aa11.7□□□□□ -0.54
SRP54-206ENST00000555317 C6orf15Q6UXA7 325 aaPredicted RBP11.7□□□□□ -0.54
SRP54-206ENST00000555317 GPR155Q7Z3F1 870 aa11.7□□□□□ -0.54
SRP54-206ENST00000555317 TRIM73Q86UV7 250 aa11.7□□□□□ -0.54
SRP54-206ENST00000555317 VASH2Q86V25 355 aa11.7□□□□□ -0.54
SRP54-206ENST00000555317 TMEM126BQ8IUX1 230 aa11.7□□□□□ -0.54
SRP54-206ENST00000555317 C2orf73Q8N5S3 287 aaPredicted RBP11.7□□□□□ -0.54
SRP54-206ENST00000555317 C19orf47Q8N9M1 422 aaKnown RBP11.7□□□□□ -0.54
SRP54-206ENST00000555317 OR2L8Q8NGY9 312 aa11.7□□□□□ -0.54
SRP54-206ENST00000555317 CD200R1Q8TD46 325 aa11.7□□□□□ -0.54
SRP54-206ENST00000555317 PPM1MQ96MI6 270 aa11.7□□□□□ -0.54
SRP54-206ENST00000555317 IL17FQ96PD4 163 aa11.7□□□□□ -0.54
SRP54-206ENST00000555317 EFHD1Q9BUP0 239 aa11.7□□□□□ -0.54
SRP54-206ENST00000555317 PITPNM3Q9BZ71 974 aa11.7□□□□□ -0.54
SRP54-206ENST00000555317 SLC7A5P2Q9GIP4 190 aa11.7□□□□□ -0.54
SRP54-206ENST00000555317 CPNE5Q9HCH3 593 aa11.7□□□□□ -0.54
SRP54-206ENST00000555317 IRAK4Q9NWZ3 460 aa11.7□□□□□ -0.54
SRP54-206ENST00000555317 GRHL1Q9NZI5 618 aa11.7□□□□□ -0.54
SRP54-206ENST00000555317 SPATA7Q9P0W8 599 aa11.7□□□□□ -0.54
SRP54-206ENST00000555317 SLC17A6Q9P2U8 582 aa11.7□□□□□ -0.54
SRP54-206ENST00000555317 PILRAQ9UKJ1 303 aa11.7□□□□□ -0.54
SRP54-206ENST00000555317 DHRS7Q9Y394 339 aa11.7□□□□□ -0.54
SRP54-206ENST00000555317 PCM1Q15154 2024 aa11.69□□□□□ -0.54
SRP54-206ENST00000555317 TP73O15350 636 aa11.69□□□□□ -0.54
SRP54-206ENST00000555317 ZBTB14O43829 449 aa11.69□□□□□ -0.54
SRP54-206ENST00000555317 SPAG6O75602 509 aa11.69□□□□□ -0.54
SRP54-206ENST00000555317 MATN4O95460 622 aa11.69□□□□□ -0.54
SRP54-206ENST00000555317 SYF2O95926 243 aaKnown RBP11.69□□□□□ -0.54
SRP54-206ENST00000555317 AHSGP02765 367 aa11.69□□□□□ -0.54
SRP54-206ENST00000555317 MPC1LP0DKB6 136 aa11.69□□□□□ -0.54
SRP54-206ENST00000555317 PVRP15151 417 aa11.69□□□□□ -0.54
SRP54-206ENST00000555317 CYP2A7P20853 494 aa11.69□□□□□ -0.54
SRP54-206ENST00000555317 HSD17B2P37059 387 aa11.69□□□□□ -0.54
SRP54-206ENST00000555317 SLC7A5Q01650 507 aa11.69□□□□□ -0.54
SRP54-206ENST00000555317 GUCY2DQ02846 1103 aa11.69□□□□□ -0.54
SRP54-206ENST00000555317 ILF2Q12905 390 aaKnown RBP11.69□□□□□ -0.54
SRP54-206ENST00000555317 TSTA3Q13630 321 aaPredicted RBP11.69□□□□□ -0.54
SRP54-206ENST00000555317 GBX1Q14549 363 aa11.69□□□□□ -0.54
SRP54-206ENST00000555317 SF1Q15637 639 aaKnown RBP11.69□□□□□ -0.54
SRP54-206ENST00000555317 FAM45BPQ6NSW5 357 aa11.69□□□□□ -0.54
SRP54-206ENST00000555317 CEP128Q6ZU80 1094 aa11.69□□□□□ -0.54
SRP54-206ENST00000555317 STRA8Q7Z7C7 330 aa11.69□□□□□ -0.54
SRP54-206ENST00000555317 SLC26A11Q86WA9 606 aa11.69□□□□□ -0.54
SRP54-206ENST00000555317 DTX1Q86Y01 620 aa11.69□□□□□ -0.54
SRP54-206ENST00000555317 CPNE9Q8IYJ1 553 aa11.69□□□□□ -0.54
SRP54-206ENST00000555317 GPR135Q8IZ08 494 aa11.69□□□□□ -0.54
SRP54-206ENST00000555317 MYO1HQ8N1T3 1032 aa11.69□□□□□ -0.54
SRP54-206ENST00000555317 GALNT6Q8NCL4 622 aa11.69□□□□□ -0.54
SRP54-206ENST00000555317 GIMAP7Q8NHV1 300 aa11.69□□□□□ -0.54
SRP54-206ENST00000555317 FAM45AQ8TCE6 357 aa11.69□□□□□ -0.54
SRP54-206ENST00000555317 FBXO25Q8TCJ0 367 aa11.69□□□□□ -0.54
SRP54-206ENST00000555317 NKD1Q969G9 470 aa11.69□□□□□ -0.54
SRP54-206ENST00000555317 TCTN2Q96GX1 697 aa11.69□□□□□ -0.54
SRP54-206ENST00000555317 FCRL4Q96PJ5 515 aa11.69□□□□□ -0.54
SRP54-206ENST00000555317 TRAPPC9Q96Q05 1148 aa11.69□□□□□ -0.54
SRP54-206ENST00000555317 OR2A14Q96R47 310 aa11.69□□□□□ -0.54
SRP54-206ENST00000555317 WDR83Q9BRX9 315 aaKnown RBP11.69□□□□□ -0.54
SRP54-206ENST00000555317 LRRC1Q9BTT6 524 aa11.69□□□□□ -0.54
SRP54-206ENST00000555317 PHACTR1Q9C0D0 580 aa11.69□□□□□ -0.54
SRP54-206ENST00000555317 GPN2Q9H9Y4 310 aaPredicted RBP11.69□□□□□ -0.54
SRP54-206ENST00000555317 SPHK1Q9NYA1 384 aa11.69□□□□□ -0.54
SRP54-206ENST00000555317 GALPQ9UBC7 116 aa11.69□□□□□ -0.54
SRP54-206ENST00000555317 MTRF1LQ9UGC7 380 aaKnown RBP11.69□□□□□ -0.54
SRP54-206ENST00000555317 SERTAD3Q9UJW9 196 aa11.69□□□□□ -0.54
SRP54-206ENST00000555317 TMEM184BQ9Y519 407 aaPredicted RBP11.69□□□□□ -0.54
SRP54-206ENST00000555317 SEC16AO15027 2179 aa11.69□□□□□ -0.54
SRP54-206ENST00000555317 PIEZO2Q9H5I5 2752 aa11.68□□□□□ -0.54
SRP54-206ENST00000555317 ESYT3A0FGR9 886 aa11.68□□□□□ -0.54
SRP54-206ENST00000555317 ARHGEF33A8MVX0 844 aa11.68□□□□□ -0.54
SRP54-206ENST00000555317 CPNE3O75131 537 aaKnown RBP11.68□□□□□ -0.54
SRP54-206ENST00000555317 PSIP1O75475 530 aaKnown RBP11.68□□□□□ -0.54
SRP54-206ENST00000555317 SCRG1O75711 98 aa11.68□□□□□ -0.54
SRP54-206ENST00000555317 FKBP9O95302 570 aa11.68□□□□□ -0.54
SRP54-206ENST00000555317 GSTA2P09210 222 aa11.68□□□□□ -0.54
SRP54-206ENST00000555317 TPBGLP0DKB5 382 aa11.68□□□□□ -0.54
SRP54-206ENST00000555317 SAT1P21673 171 aa11.68□□□□□ -0.54
SRP54-206ENST00000555317 SLC12A2P55011 1212 aa11.68□□□□□ -0.54
SRP54-206ENST00000555317 ITGA1P56199 1179 aa11.68□□□□□ -0.54
SRP54-206ENST00000555317 ABHD18Q0P651 414 aa11.68□□□□□ -0.54
SRP54-206ENST00000555317 MAP7Q14244 749 aa11.68□□□□□ -0.54
SRP54-206ENST00000555317 NAA25Q14CX7 972 aa11.68□□□□□ -0.54
SRP54-206ENST00000555317 RBM20Q5T481 1227 aaKnown RBP11.68□□□□□ -0.54
SRP54-206ENST00000555317 HECTD2Q5U5R9 776 aa11.68□□□□□ -0.54
SRP54-206ENST00000555317 PWWP2BQ6NUJ5 590 aa11.68□□□□□ -0.54
SRP54-206ENST00000555317 UBE2R2Q712K3 238 aaPredicted RBP11.68□□□□□ -0.54
SRP54-206ENST00000555317 CEP112Q8N8E3 955 aa11.68□□□□□ -0.54
SRP54-206ENST00000555317 OR9A1PQ8NGU1 263 aa11.68□□□□□ -0.54
SRP54-206ENST00000555317 RNF31Q96EP0 1072 aa11.68□□□□□ -0.54
SRP54-206ENST00000555317 CRELD1Q96HD1 420 aa11.68□□□□□ -0.54
SRP54-206ENST00000555317 VPS39Q96JC1 886 aa11.68□□□□□ -0.54
SRP54-206ENST00000555317 SLC30A3Q99726 388 aa11.68□□□□□ -0.54
SRP54-206ENST00000555317 PRORYQ9H606 182 aa11.68□□□□□ -0.54
SRP54-206ENST00000555317 PLAC1Q9HBJ0 212 aa11.68□□□□□ -0.54
SRP54-206ENST00000555317 CACNA1GO43497 2377 aa11.67□□□□□ -0.54
SRP54-206ENST00000555317 TEX51A0A1B0GUA7 166 aa11.67□□□□□ -0.54
SRP54-206ENST00000555317 E7EQ34 232 aa11.67□□□□□ -0.54
SRP54-206ENST00000555317 K7ENP7 123 aa11.67□□□□□ -0.54
SRP54-206ENST00000555317 MYO1CO00159 1063 aa11.67□□□□□ -0.54
SRP54-206ENST00000555317 EFSO43281 561 aa11.67□□□□□ -0.54
SRP54-206ENST00000555317 DLGAP3O95886 979 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms